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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7QJZ | 14027 | 2024-04-05 | 2021-12-17 | 3.4 | 3.37 | 3.42 | 3.5 | 0.011 | 2.09 | 0.0 | 0.10 | 13.72 | 0.01 | 2.490 | 0.44 | 0.00 | 5.3 | 94.4 | 0.2 | -3.28 | 0.40 | 0.74 | 4.32 | 3.4 | 0.004 | 0.77 | 0.0 | 0.05 | 14.75 | 0.00 | 2.226 | 9.30 | 3.33 | 7.6 | 92.4 | 0.0 | -3.19 | 2.58 | 0.37 | 0.77 | 4.32 | 3378 | 444 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8P4K | 17410 | 2024-04-13 | 2023-05-22 | 3.8 | 3.61 | 4.17 | 3.8 | 0.020 | 2.62 | 0.0 | 0.10 | 9.97 | 0.01 | 2.351 | 1.00 | 0.00 | 1.0 | 99.0 | 0.0 | 0.04 | 0.30 | 0.42 | 1.07 | 3.6 | 0.003 | 1.08 | 0.0 | 0.04 | 13.47 | 0.00 | 1.954 | 16.26 | 1.08 | 4.5 | 95.5 | 0.0 | -0.05 | 0.82 | 0.37 | 0.52 | 0.93 | 29211 | 1797 | 3 | 0 | 0 | 0 | 14643 | logfile |
✔ | 8UV3 | 42604 | 2024-04-08 | 2023-11-02 | 2.72 | 2.82 | 2.64 | 2.8 | 0.010 | 1.06 | 0.0 | 0.06 | 14.69 | 0.01 | 1.851 | 5.72 | 0.39 | 8.0 | 91.8 | 0.2 | -3.67 | 0.38 | 0.84 | 3.98 | 2.8 | 0.003 | 0.70 | 0.0 | 0.05 | 16.05 | 0.01 | 1.919 | 4.48 | 2.36 | 5.6 | 94.4 | 0.0 | -1.63 | 0.35 | 0.37 | 0.76 | 3.31 | 12069 | 1534 | 9 | 0 | 3 | 276 | 0 | logfile |
✔ | 7VZF | 32227 | 2024-04-05 | 2021-11-16 | 2.95 | 2.71 | — | 3.0 | 0.009 | 1.06 | 0.0 | 0.06 | 16.23 | 0.01 | 1.971 | 38.45 | 0.00 | 26.5 | 73.5 | 0.0 | -5.56 | 0.30 | 0.43 | -0.13 | 2.8 | 0.004 | 0.92 | 0.0 | 0.05 | 18.65 | 0.00 | 2.097 | 12.69 | 6.03 | 18.5 | 81.5 | 0.0 | -4.26 | 1.85 | 0.37 | 0.63 | -0.15 | 2628 | 363 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WHN | 32505 | 2024-04-07 | 2021-12-31 | 3.3 | 2.99 | — | 3.2 | 0.009 | 0.80 | 0.0 | 0.05 | 13.81 | 0.01 | 2.147 | 7.64 | 0.10 | 4.5 | 95.5 | 0.0 | -1.29 | 0.41 | 0.83 | 2.92 | 3.2 | 0.002 | 0.49 | 0.0 | 0.04 | 15.09 | 0.00 | 2.279 | 5.47 | 0.67 | 2.4 | 97.6 | 0.0 | 0.96 | 0.38 | 0.37 | 0.81 | 2.17 | 9284 | 1170 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QWG | 14187 | 2024-04-05 | 2022-01-25 | 3.38 | 3.26 | 2.98 | 3.3 | 0.012 | 2.34 | 10.0 | 0.15 | 14.89 | 0.01 | 2.525 | 0.31 | 0.26 | 10.0 | 90.0 | 0.0 | -3.26 | 0.41 | 0.82 | 4.16 | 3.3 | 0.004 | 0.74 | 0.0 | 0.05 | 17.03 | 0.00 | 2.223 | 11.06 | 3.44 | 10.0 | 90.0 | 0.0 | -3.56 | 2.40 | 0.37 | 0.83 | 3.54 | 3258 | 405 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FUV | 29481 | 2024-04-07 | 2023-01-18 | 3.1 | 3.21 | 2.89 | 3.1 | 0.003 | 0.59 | 0.0 | 0.04 | 12.83 | 0.00 | 2.169 | 5.52 | 0.00 | 5.6 | 94.4 | 0.0 | -0.17 | 0.36 | 0.86 | 3.59 | 3.1 | 0.004 | 0.60 | 0.0 | 0.05 | 14.33 | 0.01 | 2.182 | 6.60 | 2.40 | 5.7 | 93.9 | 0.4 | -0.61 | 1.17 | 0.37 | 0.89 | 3.81 | 10170 | 1368 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q8X | 18264 | 2024-04-05 | 2023-08-19 | 2.54 | 2.40 | 2.39 | 2.5 | 0.011 | 1.74 | 0.0 | 0.08 | 11.92 | 0.01 | 2.517 | 0.00 | 1.27 | 2.5 | 97.5 | 0.0 | -1.63 | 0.27 | 0.77 | 6.72 | 2.4 | 0.005 | 0.65 | 0.0 | 0.05 | 16.11 | 0.00 | 2.244 | 3.57 | 1.53 | 2.3 | 97.7 | 0.0 | -1.95 | 0.91 | 0.37 | 0.91 | 6.88 | 3435 | 453 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QWL | 14188 | 2024-04-05 | 2022-01-25 | 3.47 | 3.11 | 2.99 | 3.5 | 0.012 | 2.27 | 14.0 | 0.13 | 13.78 | 0.01 | 2.501 | 3.69 | 1.06 | 11.3 | 88.2 | 0.5 | -3.35 | 0.45 | 0.81 | 5.36 | 3.5 | 0.005 | 0.78 | 0.0 | 0.05 | 16.16 | 0.00 | 2.070 | 11.21 | 4.76 | 11.3 | 88.7 | 0.0 | -3.25 | 3.78 | 0.37 | 0.81 | 4.64 | 3258 | 405 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q9L | 18285 | 2024-04-07 | 2023-08-20 | 2.76 | 2.36 | 2.64 | 2.6 | 0.011 | 1.76 | 0.0 | 0.09 | 11.63 | 0.01 | 2.537 | 0.00 | 0.00 | 1.6 | 98.4 | 0.0 | -1.68 | 0.29 | 0.76 | 6.43 | 2.6 | 0.002 | 0.51 | 0.0 | 0.05 | 17.45 | 0.00 | 2.055 | 2.15 | 0.87 | 1.3 | 98.7 | 0.0 | -2.16 | 1.43 | 0.37 | 0.86 | 6.69 | 10233 | 657 | 9 | 0 | 0 | 0 | 5220 | logfile |
✔ | 6HRF | 0260 | 2024-04-05 | 2018-09-26 | 3.3 | 3.38 | 2.95 | 3.5 | 0.016 | 1.25 | 0.0 | 0.09 | 13.68 | 0.01 | 2.627 | 7.82 | 0.00 | 13.3 | 86.7 | 0.0 | -4.08 | 0.38 | 0.74 | 2.93 | 3.5 | 0.005 | 0.81 | 0.0 | 0.05 | 16.52 | 0.00 | 2.188 | 8.24 | 3.48 | 7.1 | 92.9 | 0.0 | -3.60 | 3.61 | 0.37 | 0.78 | 3.57 | 3522 | 462 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QWM | 14189 | 2024-04-05 | 2022-01-25 | 2.76 | 2.21 | 2.47 | 2.2 | 0.012 | 1.93 | 3.0 | 0.11 | 13.26 | 0.01 | 2.502 | 0.15 | 0.00 | 8.0 | 92.0 | 0.0 | -2.89 | 0.34 | 0.80 | 6.86 | 2.2 | 0.004 | 0.68 | 0.0 | 0.05 | 17.24 | 0.00 | 2.109 | 9.54 | 0.79 | 6.3 | 93.7 | 0.0 | -2.85 | 0.51 | 0.37 | 0.82 | 6.28 | 3255 | 405 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QJQ | 4566 | 2024-04-05 | 2019-01-24 | 3.7 | 3.99 | 2.14 | 4.1 | 0.021 | 1.17 | 0.0 | 0.11 | 13.36 | 0.01 | 2.499 | 5.58 | 0.00 | 4.0 | 94.0 | 2.0 | -4.41 | 0.39 | 0.75 | 2.60 | 4.1 | 0.003 | 0.74 | 0.0 | 0.05 | 14.32 | 0.00 | 2.354 | 7.97 | 0.00 | 6.0 | 94.0 | 0.0 | -2.75 | 1.23 | 0.37 | 0.74 | 1.67 | 1218 | 162 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QK2 | 14029 | 2024-04-05 | 2021-12-17 | 2.61 | 2.61 | 2.37 | 2.7 | 0.011 | 1.86 | 10.0 | 0.11 | 10.81 | 0.01 | 2.499 | 0.15 | 0.00 | 4.1 | 95.9 | 0.0 | -1.51 | 0.37 | 0.86 | 6.04 | 2.7 | 0.004 | 0.67 | 0.0 | 0.05 | 16.79 | 0.00 | 2.157 | 5.14 | 2.96 | 2.9 | 97.1 | 0.0 | -1.87 | 1.29 | 0.37 | 0.88 | 5.61 | 3246 | 426 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QL1 | 14060 | 2024-04-05 | 2021-12-19 | 3.34 | 3.41 | 3.13 | 3.4 | 0.011 | 2.01 | 0.0 | 0.10 | 11.06 | 0.01 | 2.654 | 0.29 | 0.00 | 7.5 | 92.5 | 0.0 | -3.09 | 0.42 | 0.83 | 4.57 | 3.4 | 0.004 | 0.74 | 0.0 | 0.05 | 15.06 | 0.00 | 2.262 | 8.51 | 3.12 | 3.3 | 96.7 | 0.0 | -2.38 | 1.66 | 0.38 | 0.81 | 4.29 | 1671 | 219 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 4V1A | 2787 | 2024-04-14 | 2014-09-25 | 3.4 | 3.43 | — | 3.4 | 0.009 | 1.29 | 0.0 | 0.05 | 13.81 | 0.01 | 2.067 | 12.17 | 6.03 | 4.6 | 95.3 | 0.1 | -2.62 | 0.37 | 0.78 | 1.69 | 3.4 | 0.003 | 0.69 | 0.0 | 0.04 | 16.98 | 0.00 | 2.070 | 10.97 | 3.71 | 4.0 | 95.9 | 0.1 | 0.59 | 1.85 | 0.38 | 0.80 | 1.65 | 31917 | 3843 | 24 | 0 | 94 | 0 | 0 | logfile |
✔ | 8oTJ | 17181 | 2024-04-05 | 2023-04-20 | 3.3 | 3.37 | 3.07 | 3.5 | 0.008 | 1.80 | 7.0 | 0.11 | 16.48 | 0.01 | 2.400 | 7.78 | 4.48 | 12.4 | 87.6 | 0.0 | -5.06 | 0.42 | 0.87 | 4.78 | 3.5 | 0.005 | 0.79 | 0.0 | 0.05 | 15.82 | 0.00 | 2.257 | 7.30 | 1.71 | 6.7 | 93.3 | 0.0 | -3.11 | 1.00 | 0.38 | 0.83 | 4.59 | 4109 | 539 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oTi | 17180 | 2024-04-05 | 2023-04-20 | 2.7 | 2.46 | 2.62 | 2.8 | 0.012 | 1.63 | 0.0 | 0.10 | 13.67 | 0.01 | 2.388 | 3.56 | 5.30 | 2.7 | 97.3 | 0.0 | -3.63 | 0.41 | 0.92 | 6.96 | 2.8 | 0.003 | 0.60 | 0.0 | 0.05 | 17.21 | 0.00 | 2.385 | 2.56 | 5.05 | 0.7 | 99.3 | 0.0 | -1.84 | 1.26 | 0.38 | 0.90 | 5.48 | 3444 | 450 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q2K | 18111 | 2024-04-06 | 2023-08-02 | 2.88 | 2.65 | 2.79 | 2.8 | 0.011 | 1.80 | 0.0 | 0.07 | 10.49 | 0.01 | 2.538 | 0.43 | 0.00 | 4.1 | 95.9 | 0.0 | -1.81 | 0.28 | 0.75 | 5.37 | 2.8 | 0.003 | 0.51 | 0.0 | 0.05 | 17.02 | 0.00 | 2.146 | 0.85 | 0.51 | 0.0 | 100.0 | 0.0 | -1.78 | 3.23 | 0.38 | 0.85 | 4.69 | 7032 | 450 | 6 | 0 | 0 | 0 | 3588 | logfile |
✔ | 7MDX | 23783 | 2024-04-07 | 2021-04-06 | 3.8 | 4.16 | — | 4.1 | 0.004 | 0.70 | 1.0 | 0.05 | 15.65 | 0.01 | 2.228 | 10.45 | 0.10 | 8.4 | 91.6 | 0.0 | -1.27 | 0.39 | 0.72 | 0.93 | 4.1 | 0.003 | 0.72 | 0.0 | 0.04 | 17.83 | 0.00 | 2.083 | 13.88 | 3.85 | 9.6 | 90.4 | 0.1 | -1.29 | 1.16 | 0.38 | 0.71 | 0.81 | 9513 | 1234 | 5 | 0 | 4 | 0 | 0 | logfile |