The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6JSi | 9882 | 2024-04-07 | 2019-04-08 | 4.7 | 4.70 | — | 4.6 | 0.007 | 1.48 | 0.0 | 0.06 | 15.33 | 0.01 | 2.231 | 10.68 | 2.42 | 23.2 | 72.3 | 4.5 | -6.05 | 0.64 | 0.72 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 62820 | 5844 | 9 | 0 | 4044 | 0 | 0 | logfile |
✔ | 6P48 | 20246 | 2024-04-07 | 2019-05-26 | 3.2 | 3.42 | 2.96 | 3.5 | 0.011 | 1.56 | 2.0 | 0.09 | 16.57 | 0.01 | 2.014 | 22.33 | 3.53 | 6.5 | 92.6 | 0.9 | -6.05 | 0.59 | 0.65 | 1.57 | 3.5 | 0.004 | 0.82 | 0.0 | 0.04 | 17.21 | 0.01 | 2.211 | 17.81 | 4.37 | 9.9 | 89.9 | 0.2 | -2.11 | 0.75 | 0.61 | 0.67 | 1.68 | 9936 | 1208 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 6J5A | 0670 | 2024-04-06 | 2019-01-10 | 4.35 | 4.41 | — | 4.3 | 0.008 | 1.25 | 0.0 | 0.05 | 15.23 | 0.01 | 1.776 | 15.50 | 1.18 | 8.9 | 90.5 | 0.6 | -6.05 | 0.52 | 0.56 | — | 4.3 | 0.004 | 0.82 | 0.0 | 0.04 | 13.11 | 0.00 | 2.123 | 12.08 | 0.00 | 8.9 | 91.1 | 0.0 | -1.50 | 1.19 | 0.58 | 0.67 | — | 8544 | 1064 | 18 | 0 | 218 | 0 | 0 | logfile |
✔ | 6LNi | 0931 | 2024-04-05 | 2019-12-30 | 2.702 | 2.94 | — | 2.9 | 0.004 | 0.55 | 0.0 | 0.04 | 14.81 | 0.00 | 2.200 | 10.98 | 0.00 | 12.6 | 87.4 | 0.0 | -6.05 | 0.48 | 0.82 | 5.95 | 2.9 | 0.004 | 0.63 | 0.0 | 0.05 | 19.56 | 0.00 | 2.233 | 9.41 | 2.28 | 9.8 | 90.2 | 0.0 | -4.02 | 1.14 | 0.55 | 0.88 | 5.48 | 4920 | 600 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DSH | 30833 | 2024-04-08 | 2020-12-31 | 3.67 | 3.52 | — | 3.6 | 0.007 | 1.08 | 1.0 | 0.06 | 12.54 | 0.01 | 2.099 | 6.74 | 0.46 | 9.5 | 90.4 | 0.1 | -6.04 | 0.67 | 0.76 | 3.10 | 3.6 | 0.004 | 0.68 | 0.0 | 0.04 | 14.45 | 0.00 | 2.178 | 13.48 | 3.15 | 7.6 | 92.4 | 0.1 | -2.78 | 0.59 | 0.68 | 0.76 | 2.15 | 12071 | 1500 | 4 | 0 | 5 | 0 | 0 | logfile |
✔ | 7BZ2 | 30249 | 2024-04-06 | 2020-04-26 | 3.82 | 3.99 | — | 3.9 | 0.004 | 0.68 | 0.0 | 0.05 | 15.12 | 0.00 | 2.101 | 12.35 | 0.00 | 10.2 | 89.8 | 0.0 | -6.04 | 0.73 | 0.79 | 2.10 | 3.9 | 0.003 | 0.63 | 0.0 | 0.04 | 16.82 | 0.00 | 2.115 | 9.71 | 2.86 | 5.6 | 94.4 | 0.0 | -2.65 | 1.57 | 0.72 | 0.78 | 1.17 | 7393 | 978 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 6M1Y | 30049 | 2024-04-08 | 2020-02-26 | 3.2 | 3.58 | — | 3.4 | 0.006 | 0.95 | 0.0 | 0.06 | 14.12 | 0.01 | 2.245 | 5.78 | 1.65 | 9.6 | 89.0 | 1.4 | -6.04 | 0.71 | 0.84 | 2.56 | 3.4 | 0.003 | 0.68 | 0.0 | 0.04 | 14.55 | 0.00 | 2.157 | 6.55 | 1.02 | 9.4 | 90.2 | 0.4 | -0.40 | 4.53 | 0.71 | 0.87 | 2.56 | 14858 | 1876 | 12 | 0 | 22 | 2 | 0 | logfile |
✔ | 6XNZ | 22274 | 2024-04-09 | 2020-07-05 | 3.8 | 3.89 | — | 3.8 | 0.011 | 0.97 | 4.0 | 0.06 | 20.61 | 0.01 | 1.842 | 27.67 | 1.72 | 14.3 | 85.5 | 0.1 | -6.04 | 0.69 | 0.72 | 1.11 | 3.8 | 0.004 | 0.79 | 0.0 | 0.04 | 21.75 | 0.00 | 2.065 | 25.56 | 3.00 | 9.8 | 90.2 | 0.0 | -2.73 | 1.72 | 0.68 | 0.71 | 0.96 | 16544 | 1785 | 12 | 116 | 2 | 0 | 0 | logfile |
✘ | 6N1i | 8903 | 2024-04-07 | 2018-11-08 | 3.58 | 3.63 | — | 3.6 | 0.009 | 1.13 | 0.0 | 0.06 | 9.87 | 0.01 | 1.147 | 27.10 | 0.00 | 2.4 | 97.6 | 0.0 | -6.04 | 0.42 | 0.58 | 0.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11136 | 1360 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FWU | 29519 | 2024-04-08 | 2023-01-23 | 3.18 | 3.47 | 3.21 | 3.5 | 0.036 | 2.60 | 0.0 | 0.12 | 20.01 | 0.01 | 2.254 | 5.53 | 0.97 | 9.2 | 90.6 | 0.2 | -6.02 | 0.69 | 0.80 | 2.67 | 3.5 | 0.003 | 0.96 | 0.0 | 0.05 | 17.91 | 0.00 | 1.982 | 10.51 | 2.49 | 8.3 | 91.6 | 0.1 | -0.51 | 0.68 | 0.69 | 0.84 | 2.20 | 14496 | 1680 | 17 | 0 | 52 | 6 | 0 | logfile |
✔ | 6QM6 | 4589 | 2024-04-07 | 2019-02-01 | 3.7 | 3.81 | 3.67 | 3.8 | 0.004 | 0.84 | 0.0 | 0.05 | 14.34 | 0.01 | 2.338 | 4.35 | 0.00 | 3.3 | 96.7 | 0.0 | -6.02 | 0.69 | 0.85 | 2.46 | 3.8 | 0.003 | 0.65 | 0.0 | 0.04 | 16.28 | 0.00 | 2.124 | 7.96 | 2.51 | 3.1 | 96.9 | 0.0 | 1.39 | 0.62 | 0.69 | 0.84 | 1.88 | 10852 | 1344 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BSV | 30168 | 2024-04-07 | 2020-03-31 | 3.0 | 3.16 | — | 3.1 | 0.005 | 1.15 | 0.0 | 0.05 | 18.88 | 0.01 | 1.809 | 30.62 | 6.19 | 7.6 | 92.2 | 0.2 | -6.02 | 0.61 | 0.86 | 4.20 | 3.1 | 0.003 | 0.89 | 0.0 | 0.04 | 17.76 | 0.00 | 0.765 | 9.21 | 2.85 | 5.7 | 94.3 | 0.0 | -1.14 | 0.98 | 0.63 | 0.88 | 3.58 | 9339 | 1139 | 6 | 0 | 8 | 4 | 0 | logfile |
✔ | 5XLo | 6729 | 2024-04-09 | 2017-05-11 | 3.8 | 3.91 | — | 3.9 | 0.009 | 1.37 | 0.0 | 0.06 | 15.31 | 0.01 | 2.050 | 13.55 | 0.29 | 17.3 | 81.9 | 0.8 | -6.02 | 0.58 | 0.64 | 0.55 | 3.9 | 0.003 | 0.88 | 0.0 | 0.04 | 18.43 | 0.01 | 2.050 | 20.71 | 3.46 | 15.9 | 83.7 | 0.4 | -4.02 | 1.62 | 0.60 | 0.66 | 0.51 | 15413 | 2073 | 9 | 38 | 0 | 0 | 0 | logfile |
✔ | 6M4H | 30078 | 2024-04-07 | 2020-03-07 | 3.9 | 4.39 | — | 3.9 | 0.008 | 0.89 | 0.0 | 0.05 | 29.22 | 0.01 | 1.729 | 27.61 | 2.85 | 3.1 | 96.7 | 0.2 | -6.02 | 0.82 | 0.76 | 1.36 | 3.9 | 0.005 | 0.75 | 0.0 | 0.04 | 29.70 | 0.01 | 2.110 | 18.03 | 3.38 | 3.8 | 96.2 | 0.0 | 1.03 | 1.75 | 0.87 | 0.84 | 1.03 | 9420 | 656 | 10 | 206 | 0 | 0 | 0 | logfile |
✔ | 6MP6 | 9187 | 2024-04-07 | 2018-10-05 | 3.54 | 4.04 | 3.81 | 4.0 | 0.006 | 1.10 | 0.0 | 0.06 | 10.39 | 0.01 | 2.439 | 3.39 | 0.00 | 7.9 | 92.1 | 0.0 | -6.02 | 0.70 | 0.81 | 2.60 | 4.0 | 0.003 | 0.86 | 0.0 | 0.04 | 15.82 | 0.00 | 2.180 | 9.47 | 5.76 | 7.3 | 92.7 | 0.0 | 0.45 | 1.45 | 0.68 | 0.82 | 1.27 | 9939 | 1338 | 6 | 0 | 3 | 0 | 0 | logfile |
✘ | 6o1N | 0593 | 2024-04-10 | 2019-02-21 | 2.9 | 3.21 | — | 3.8 | 0.011 | 1.37 | 12.0 | 0.07 | 11.02 | 0.01 | 1.856 | 9.13 | 1.51 | 6.4 | 93.1 | 0.5 | -6.01 | 0.60 | 0.73 | 2.17 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19608 | 2448 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 5XJY | 6724 | 2024-04-08 | 2017-05-04 | 4.1 | 4.17 | — | 4.1 | 0.010 | 1.31 | 0.0 | 0.07 | 14.80 | 0.01 | 2.200 | 9.25 | 1.27 | 14.1 | 85.8 | 0.2 | -6.01 | 0.64 | 0.76 | — | 4.1 | 0.003 | 0.81 | 0.0 | 0.05 | 12.36 | 0.01 | 2.110 | 11.90 | 0.11 | 9.4 | 90.6 | 0.0 | -1.48 | 3.01 | 0.63 | 0.74 | — | 12785 | 1901 | 4 | 0 | 12 | 0 | 0 | logfile |
✔ | 8SS3 | 40742 | 2024-04-10 | 2023-05-08 | 3.21 | 3.40 | 3.30 | 3.4 | 0.047 | 1.90 | 0.0 | 0.69 | 28.24 | 0.01 | 2.123 | 11.20 | 0.52 | 7.6 | 91.7 | 0.7 | -6.01 | 0.62 | 0.80 | 3.60 | 3.4 | 0.006 | 1.29 | 0.0 | 0.14 | 22.12 | 0.00 | 2.140 | 9.62 | 3.40 | 7.7 | 92.0 | 0.3 | -0.28 | 1.30 | 0.67 | 0.88 | 3.35 | 19887 | 2280 | 12 | 0 | 65 | 0 | 0 | logfile |
✔ | 7KHR | 22880 | 2024-04-07 | 2020-10-21 | 3.62 | 3.58 | — | 3.5 | 0.009 | 1.64 | 9.0 | 0.13 | 16.26 | 0.01 | 1.100 | 6.10 | 0.27 | 4.6 | 95.3 | 0.0 | -6.01 | 0.71 | 0.86 | 2.61 | 3.5 | 0.005 | 0.83 | 1.0 | 0.05 | 16.99 | 0.00 | 1.927 | 9.60 | 2.42 | 5.4 | 94.6 | 0.0 | -1.40 | 0.58 | 0.72 | 0.87 | 2.18 | 61913 | 8212 | 44 | 0 | 36 | 0 | 0 | logfile |
✔ | 7Q64 | 13851 | 2024-04-06 | 2021-11-05 | 2.76 | 2.81 | 2.66 | 2.9 | 0.014 | 1.34 | 0.0 | 0.09 | 10.20 | 0.01 | 2.276 | 7.23 | 3.83 | 8.3 | 91.7 | 0.0 | -6.01 | 0.58 | 0.78 | 3.39 | 2.8 | 0.005 | 1.25 | 1.0 | 0.05 | 14.68 | 0.00 | 2.155 | 12.46 | 6.17 | 5.3 | 94.7 | 0.0 | -5.67 | 0.74 | 0.59 | 0.86 | 3.75 | 7810 | 1100 | 30 | 0 | 0 | 0 | 0 | logfile |