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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6RH3 | 4882 | 2024-03-20 | 2019-04-18 | 3.6 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 26300 | 3207 | 9 | 58 | 4 | 0 | 0 | logfile |
✘ | 6UD3 | 20731 | 2024-03-16 | 2019-09-18 | 3.5 | 4.06 | 3.46 | 3.8 | 0.018 | 1.60 | 0.0 | 0.11 | 12.05 | 0.01 | 2.293 | 7.45 | 0.00 | 4.6 | 95.4 | 0.0 | -1.90 | 0.79 | 0.78 | 1.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14346 | 1765 | 10 | 0 | 6 | 0 | 0 | logfile |
✘ | 7DXB | 30903 | 2024-03-19 | 2021-01-18 | 2.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24244 | 2952 | 8 | 0 | 32 | 0 | 0 | logfile |
✘ | 6PXV | 20522 | 2024-03-17 | 2019-07-27 | 3.2 | 3.81 | — | 3.3 | 0.010 | 1.39 | 8.0 | 0.09 | 10.11 | 0.01 | 2.127 | 8.05 | 0.36 | 9.3 | 89.1 | 1.6 | -3.83 | 0.77 | 0.74 | 2.45 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14774 | 1830 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 7AGG | 11779 | 2024-03-11 | 2020-09-22 | 3.3 | 3.68 | — | 3.6 | 0.007 | 0.79 | 0.0 | 0.05 | 13.16 | 0.01 | 1.980 | 6.95 | 0.00 | 4.2 | 95.8 | 0.0 | -1.18 | 0.83 | 0.80 | 3.30 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8252 | 1056 | 5 | 0 | 0 | 0 | 0 | logfile |
✘ | 6VM3 | 21237 | 2024-03-16 | 2020-01-27 | 3.07 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15180 | 1810 | 15 | 0 | 15 | 0 | 0 | logfile |
✘ | 8AG4 | 15415 | 2024-03-15 | 2022-07-19 | 2.46 | 2.04 | 2.48 | 1.7 | 0.003 | 0.49 | 0.0 | 0.04 | 13.59 | 0.00 | 2.170 | 5.34 | 0.00 | 3.9 | 96.1 | 0.0 | 0.77 | 0.82 | 0.83 | 4.04 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11155 | 1384 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 7TLD | 25988 | 2024-03-19 | 2022-01-18 | 2.89 | 3.35 | — | 3.3 | 0.013 | 1.80 | 0.0 | 0.09 | 13.31 | 0.01 | 2.524 | 0.07 | 0.94 | 5.2 | 94.6 | 0.2 | -1.25 | 0.33 | 0.48 | 3.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22812 | 2916 | 3 | 0 | 0 | 0 | 0 | logfile |
✘ | 7BR7 | 30158 | 2024-03-16 | 2020-03-26 | 4.3 | 3.99 | — | 4.0 | 0.006 | 0.94 | 0.0 | 0.06 | 15.20 | 0.01 | 1.573 | 8.92 | 0.70 | 6.8 | 93.2 | 0.0 | -4.57 | 0.44 | 0.74 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 73138 | 9263 | 21 | 0 | 0 | 0 | 0 | logfile |
✘ | 7MSX | 23971 | 2024-03-10 | 2021-05-12 | 3.15 | 3.24 | 3.04 | 3.2 | 0.008 | 0.62 | 0.0 | 0.05 | 10.30 | 0.00 | 2.385 | 0.81 | 0.00 | 1.9 | 98.1 | 0.0 | 0.06 | 0.77 | 0.85 | 3.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3706 | 473 | 1 | 0 | 3 | 0 | 0 | logfile |
✘ | 7DXE | 30906 | 2024-03-18 | 2021-01-18 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22280 | 2740 | 8 | 0 | 20 | 0 | 0 | logfile |
✘ | 7DXG | 30908 | 2024-03-19 | 2021-01-18 | 2.9 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23432 | 2792 | 8 | 0 | 40 | 0 | 0 | logfile |
✘ | 7SQ7 | 25378 | 2024-03-16 | 2021-11-04 | 2.41 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15305 | 1852 | 16 | 0 | 13 | 8 | 0 | logfile |
✘ | 8HC4 | 34651 | 2024-03-25 | 2022-11-01 | 3.54 | 3.35 | 3.50 | 3.4 | 0.003 | 0.53 | 0.0 | 0.04 | 15.96 | 0.00 | 2.239 | 5.29 | 0.04 | 4.0 | 96.0 | 0.0 | -0.76 | 0.48 | 0.48 | 0.93 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 45078 | 5805 | 30 | 0 | 54 | 0 | 0 | logfile |
✘ | 7SQ9 | 25380 | 2024-03-16 | 2021-11-04 | 2.11 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15810 | 1876 | 16 | 0 | 18 | 16 | 0 | logfile |
✘ | 6U48 | 20638 | 2024-03-19 | 2019-08-23 | 2.87 | 2.54 | 2.82 | 2.8 | 0.007 | 0.93 | 3.0 | 0.05 | 22.63 | 0.02 | 1.331 | 3.48 | 0.74 | 6.2 | 93.3 | 0.4 | -3.65 | 0.49 | 0.75 | 3.87 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 90950 | 3378 | 32 | 3016 | 0 | 0 | 0 | logfile |
✘ | 6VM2 | 21236 | 2024-03-16 | 2020-01-27 | 3.34 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15355 | 1815 | 15 | 0 | 20 | 0 | 0 | logfile |
✘ | 6EDU | 9038 | 2024-03-20 | 2018-08-11 | 4.06 | 4.23 | — | 4.2 | 0.008 | 1.37 | 20.0 | 0.08 | 14.78 | 0.02 | 1.242 | 10.95 | 2.62 | 12.1 | 87.1 | 0.8 | -4.56 | 0.72 | 0.73 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 26271 | 3261 | 54 | 0 | 123 | 0 | 0 | logfile |
✘ | 6YEZ | 10798 | 2024-03-24 | 2020-03-25 | 2.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 39217 | 3438 | 35 | 0 | 244 | 2 | 0 | logfile |
✘ | 7BiN | 12192 | 2024-03-18 | 2021-01-12 | 3.2 | 1.68 | 3.08 | 3.1 | 0.010 | 0.90 | 0.0 | 0.05 | 15.16 | 0.01 | 1.043 | 16.06 | 0.04 | 9.8 | 90.1 | 0.1 | -0.58 | 0.53 | 0.67 | 1.12 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 81721 | 10887 | 56 | 0 | 0 | 0 | 0 | logfile |