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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7JG6 | 22312 | 2024-03-18 | 2020-07-18 | 3.7 | 2.39 | 3.79 | 2.2 | 0.008 | 1.40 | 0.0 | 0.00 | 6.55 | 0.01 | 2.433 | 0.00 | 0.00 | 2.9 | 97.0 | 0.1 | -0.59 | 0.62 | 0.54 | — | 2.3 | 0.004 | 0.90 | 0.0 | 0.00 | 5.83 | 0.00 | 2.226 | 1.17 | 0.00 | 11.4 | 88.6 | 0.0 | -0.80 | 1.65 | 0.71 | 0.69 | — | 19320 | 4819 | 20 | 0 | 11 | 0 | 0 | logfile |
✔ | 5VLZ | 8709 | 2024-03-20 | 2017-04-26 | 4.4 | 4.55 | — | 4.4 | 0.006 | 0.89 | 0.0 | 0.00 | 5.88 | 0.00 | 2.272 | 2.04 | 0.00 | 6.1 | 93.9 | 0.0 | -1.92 | 0.80 | 0.66 | — | 4.4 | 0.002 | 0.73 | 0.0 | 0.00 | 4.75 | 0.00 | 2.276 | 0.95 | 0.00 | 4.8 | 95.2 | 0.0 | -0.40 | 2.02 | 0.83 | 0.78 | — | 96897 | 24179 | 181 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TJZ | 25947 | 2024-03-18 | 2022-01-17 | 4.4 | 7.00 | 4.54 | 4.2 | 0.019 | 2.21 | 0.0 | 0.00 | 6.67 | 0.01 | 2.384 | 0.19 | 0.00 | 4.2 | 94.2 | 1.6 | -0.41 | 0.58 | 0.63 | — | 4.2 | 0.017 | 1.19 | 0.0 | 0.00 | 6.51 | 0.01 | 2.047 | 16.64 | 0.00 | 13.2 | 86.4 | 0.3 | -1.19 | 0.80 | 0.82 | 0.83 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TK0 | 25948 | 2024-03-18 | 2022-01-17 | 4.4 | 6.63 | 4.39 | 4.1 | 0.019 | 2.21 | 0.0 | 0.00 | 6.55 | 0.01 | 2.394 | 0.08 | 0.00 | 3.9 | 94.5 | 1.5 | -0.40 | 0.58 | 0.62 | — | 4.1 | 0.003 | 0.80 | 0.0 | 0.00 | 5.24 | 0.00 | 2.105 | 7.94 | 0.00 | 8.9 | 90.9 | 0.3 | -0.45 | 0.81 | 0.83 | 0.81 | — | 20220 | 5054 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 5G2Y | 3332 | 2024-03-16 | 2016-04-16 | 4.5 | 4.38 | — | 3.8 | 0.001 | 0.22 | 0.0 | 0.01 | 22.50 | 0.00 | 2.269 | 2.32 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.58 | 0.28 | — | 3.7 | 0.007 | 1.01 | 0.0 | 0.05 | 28.52 | 0.01 | 1.951 | 72.85 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.98 | 0.89 | 0.78 | — | 13494 | 0 | 1 | 630 | 0 | 0 | 0 | logfile |
✔ | 5A8L | 3099 | 2024-03-15 | 2015-07-16 | 3.8 | 3.60 | — | 3.5 | 0.004 | 0.67 | 0.0 | 0.02 | 21.13 | 0.00 | 1.435 | 8.96 | 0.95 | 10.3 | 86.8 | 2.9 | -2.06 | 0.18 | 0.43 | 0.47 | 3.5 | 0.005 | 0.85 | 0.0 | 0.04 | 23.10 | 0.01 | 2.082 | 20.16 | 3.98 | 11.9 | 87.3 | 0.8 | -2.35 | 1.86 | 0.23 | 0.63 | 0.31 | 12264 | 624 | 9 | 347 | 0 | 0 | 0 | logfile |
✔ | 7XSL | 33426 | 2024-03-15 | 2022-05-14 | 3.84 | 4.65 | 3.83 | 3.7 | 0.002 | 0.47 | 0.0 | 0.02 | 24.69 | 0.00 | 1.935 | 8.02 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.91 | 0.77 | — | 3.8 | 0.007 | 0.71 | 0.0 | 0.04 | 25.81 | 0.01 | 1.808 | 34.41 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.01 | 0.92 | 0.83 | — | 12467 | 0 | 1 | 388 | 0 | 0 | 4168 | logfile |
✔ | 7XSK | 33425 | 2024-03-15 | 2022-05-14 | 3.53 | 4.49 | 3.42 | 3.4 | 0.001 | 0.44 | 0.0 | 0.02 | 24.66 | 0.00 | 1.970 | 6.98 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.76 | — | 3.4 | 0.007 | 0.69 | 0.0 | 0.04 | 25.95 | 0.01 | 1.746 | 31.76 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.93 | 0.91 | 0.83 | — | 12467 | 0 | 1 | 388 | 0 | 0 | 4168 | logfile |
✔ | 7JSE | 22451 | 2024-03-16 | 2020-08-14 | 4.6 | 5.13 | — | 4.2 | 0.001 | 0.38 | 0.0 | 0.02 | 10.51 | 0.00 | 2.425 | 0.00 | 0.00 | 11.4 | 88.0 | 0.6 | -2.68 | 0.79 | 0.50 | — | 3.9 | 0.007 | 1.10 | 0.0 | 0.09 | 14.86 | 0.00 | 2.156 | 11.87 | 0.00 | 20.1 | 79.9 | 0.0 | -3.21 | 2.77 | 0.87 | 0.64 | — | 13288 | 3168 | 24 | 32 | 0 | 0 | 0 | logfile |
✔ | 8HD6 | 34670 | 2024-03-11 | 2022-11-03 | 3.73 | 4.52 | 3.73 | 3.2 | 0.002 | 0.54 | 0.0 | 0.02 | 23.56 | 0.00 | 1.969 | 2.97 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.78 | — | 3.3 | 0.008 | 0.89 | 0.0 | 0.05 | 25.51 | 0.01 | 1.715 | 29.97 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.18 | 0.91 | 0.83 | — | 8980 | 0 | 1 | 419 | 25 | 0 | 0 | logfile |
✔ | 7YCi | 33740 | 2024-03-11 | 2022-07-01 | 2.98 | 4.31 | 3.09 | 3.2 | 0.002 | 0.48 | 0.0 | 0.02 | 24.35 | 0.00 | 1.521 | 15.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.93 | 0.84 | — | 3.3 | 0.005 | 0.62 | 0.0 | 0.04 | 24.57 | 0.00 | 1.865 | 23.49 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.94 | 0.95 | 0.90 | — | 8474 | 0 | 2 | 395 | 4 | 0 | 0 | logfile |
✔ | 7YCH | 33739 | 2024-03-11 | 2022-07-01 | 3.09 | 4.46 | 3.30 | 3.5 | 0.002 | 0.48 | 0.0 | 0.02 | 24.19 | 0.00 | 1.420 | 15.91 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.92 | 0.84 | — | 3.6 | 0.007 | 0.67 | 0.0 | 0.04 | 24.32 | 0.00 | 1.812 | 30.74 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.91 | 0.94 | 0.88 | — | 8661 | 0 | 2 | 404 | 4 | 0 | 0 | logfile |
✔ | 6UES | 20755 | 2024-03-10 | 2019-09-23 | 3.7 | 3.94 | — | 3.2 | 0.002 | 0.48 | 0.0 | 0.02 | 26.31 | 0.00 | 2.100 | 7.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.87 | 0.76 | — | 3.3 | 0.007 | 0.89 | 0.0 | 0.04 | 27.66 | 0.01 | 1.797 | 37.47 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.86 | 0.88 | 0.83 | — | 3842 | 0 | 1 | 119 | 0 | 0 | 1291 | logfile |
✔ | 8E41 | 27876 | 2024-03-12 | 2022-08-17 | 2.13 | 2.86 | 2.57 | 2.6 | 0.005 | 0.36 | 1.0 | 0.02 | 23.37 | 0.02 | 1.983 | 1.89 | 0.85 | 5.2 | 94.8 | 0.0 | 0.82 | 0.73 | 0.90 | 5.26 | 2.6 | 0.005 | 0.59 | 1.0 | 0.04 | 23.21 | 0.01 | 1.982 | 3.23 | 1.48 | 5.9 | 94.0 | 0.1 | 0.21 | 0.23 | 0.73 | 0.91 | 5.29 | 115744 | 1186 | 12 | 3016 | 1 | 0 | 41833 | logfile |
✔ | 7YC8 | 33736 | 2024-03-11 | 2022-07-01 | 4.14 | 7.25 | 4.31 | 4.1 | 0.002 | 0.51 | 0.0 | 0.02 | 25.12 | 0.00 | 2.079 | 18.05 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.96 | 0.87 | — | 4.1 | 0.006 | 0.81 | 0.0 | 0.04 | 27.57 | 0.01 | 1.977 | 68.78 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.24 | 0.97 | 0.89 | — | 8335 | 0 | 1 | 388 | 1 | 0 | 0 | logfile |
✔ | 8E36 | 27858 | 2024-03-12 | 2022-08-16 | 2.38 | 3.00 | 2.65 | 2.8 | 0.006 | 0.56 | 0.0 | 0.02 | 23.67 | 0.02 | 1.934 | 2.28 | 0.32 | 4.2 | 95.8 | 0.0 | 1.12 | 0.72 | 0.90 | 4.41 | 2.8 | 0.007 | 0.61 | 0.0 | 0.04 | 23.48 | 0.01 | 1.921 | 3.94 | 1.59 | 5.2 | 94.8 | 0.1 | 0.10 | 0.86 | 0.69 | 0.89 | 4.84 | 115712 | 1179 | 11 | 3015 | 1 | 0 | 41809 | logfile |
✔ | 6PCH | 20300 | 2024-03-16 | 2019-06-17 | 2.9 | 3.23 | — | 3.1 | 0.005 | 0.37 | 0.0 | 0.02 | 23.63 | 0.02 | 1.702 | 3.90 | 2.23 | 7.9 | 92.0 | 0.1 | -4.23 | 0.61 | 0.79 | 3.30 | 3.1 | 0.004 | 0.65 | 0.0 | 0.03 | 23.94 | 0.01 | 2.032 | 11.26 | 3.94 | 8.7 | 91.2 | 0.1 | -2.16 | 0.51 | 0.63 | 0.82 | 1.90 | 72134 | 964 | 8 | 3015 | 1 | 0 | 0 | logfile |
✔ | 6PCQ | 20304 | 2024-03-16 | 2019-06-18 | 2.6 | 3.06 | — | 2.9 | 0.008 | 0.44 | 0.0 | 0.02 | 23.64 | 0.02 | 1.976 | 3.10 | 1.84 | 6.8 | 93.2 | 0.0 | -4.00 | 0.66 | 0.84 | 4.35 | 2.9 | 0.005 | 0.66 | 0.0 | 0.04 | 23.77 | 0.01 | 2.121 | 9.19 | 3.82 | 7.0 | 92.7 | 0.2 | -1.56 | 1.73 | 0.66 | 0.86 | 4.23 | 72125 | 963 | 8 | 3015 | 1 | 0 | 0 | logfile |
✔ | 6PC5 | 20296 | 2024-03-16 | 2019-06-16 | 2.7 | 3.05 | — | 2.9 | 0.006 | 0.44 | 1.0 | 0.02 | 23.60 | 0.02 | 1.965 | 2.72 | 1.57 | 6.1 | 93.8 | 0.1 | -3.49 | 0.73 | 0.88 | 5.14 | 2.9 | 0.005 | 0.64 | 1.0 | 0.03 | 23.69 | 0.01 | 2.063 | 7.48 | 4.33 | 6.1 | 93.7 | 0.2 | -1.09 | 1.24 | 0.74 | 0.91 | 4.40 | 72206 | 971 | 9 | 3015 | 1 | 0 | 0 | logfile |
✔ | 7SAM | 24952 | 2024-03-10 | 2021-09-22 | 4.3 | 6.95 | 4.38 | 4.2 | 0.001 | 0.39 | 0.0 | 0.02 | 23.50 | 0.00 | 1.952 | 2.96 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.84 | 0.51 | — | 4.3 | 0.006 | 0.88 | 0.0 | 0.04 | 28.37 | 0.01 | 1.818 | 83.35 | 0.00 | 0.0 | 0.0 | 0.0 | — | 5.72 | 0.95 | 0.87 | — | 5399 | 0 | 1 | 169 | 0 | 0 | 1802 | logfile |