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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7RCV | 24407 | 2022-05-12 | 2021-07-08 | 2.01 | 1.78 | — | 1.9 | 0.024 | 2.35 | 0.0 | 0.13 | 20.29 | 0.01 | 1.915 | 14.01 | 1.99 | 2.6 | 97.4 | 0.0 | 0.92 | 0.78 | 0.79 | 5.10 | 1.9 | 0.004 | 0.79 | 0.0 | 0.05 | 18.79 | 0.01 | 2.078 | 12.10 | 1.79 | 2.8 | 97.2 | 0.0 | 0.86 | 0.91 | 0.79 | 0.82 | 5.23 | 54656 | 5544 | 114 | 0 | 228 | 1236 | 0 | logfile |
✔ | 7o6E | 12738 | 2022-05-17 | 2021-04-10 | 2.1 | 1.78 | 2.15 | 1.6 | 0.017 | 1.10 | 0.0 | 0.07 | 18.13 | 0.01 | 2.110 | 3.61 | 0.00 | 2.3 | 97.7 | 0.0 | 2.10 | 0.87 | 0.88 | 6.02 | 1.6 | 0.004 | 0.52 | 0.0 | 0.03 | 18.17 | 0.01 | 2.172 | 3.96 | 0.38 | 0.6 | 99.4 | 0.0 | 4.21 | 0.27 | 0.88 | 0.89 | 5.41 | 35304 | 4248 | 48 | 0 | 0 | 1392 | 0 | logfile |
✘ | 7EFD | 31084 | 2022-05-14 | 2021-03-21 | 1.77 | 1.79 | 1.83 | 1.9 | 0.033 | 3.16 | 60.0 | 0.09 | 15.47 | 0.02 | 0.000 | 2.38 | 2.15 | 1.7 | 97.5 | 0.8 | -0.54 | 0.71 | 0.78 | 5.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20020 | 2400 | 20 | 0 | 20 | 780 | 0 | logfile |
✘ | 7F4V | 31455 | 2022-05-14 | 2021-06-21 | 2.04 | 1.80 | — | 2.0 | 0.025 | 2.41 | 0.0 | 0.08 | 19.51 | 0.03 | 1.163 | 4.76 | 2.78 | 3.0 | 96.9 | 0.1 | -2.15 | 0.70 | 0.83 | 6.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 67641 | 6336 | 78 | 0 | 453 | 402 | 0 | logfile |
✘ | 7ATE | 11921 | 2022-05-13 | 2020-10-30 | 2.4 | 1.80 | 2.30 | 1.8 | 0.011 | 1.33 | 6.0 | 0.07 | 16.98 | 0.01 | 1.340 | 17.56 | 1.67 | 3.2 | 96.8 | 0.0 | 0.62 | 0.62 | 0.78 | 4.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9056 | 1098 | 10 | 0 | 9 | 145 | 0 | logfile |
✔ | 7PF1 | 13364 | 2022-05-17 | 2021-08-11 | 2.1 | 1.83 | — | 2.0 | 0.020 | 1.66 | 0.0 | 0.12 | 14.32 | 0.01 | 1.766 | 1.61 | 0.65 | 1.7 | 98.3 | 0.0 | 1.14 | 0.71 | 0.75 | 6.05 | 1.8 | 0.003 | 0.56 | 0.0 | 0.04 | 17.16 | 0.00 | 1.943 | 11.41 | 0.05 | 1.7 | 98.3 | 0.0 | 5.04 | 1.38 | 0.78 | 0.82 | 7.01 | 41646 | 4176 | 72 | 0 | 263 | 7207 | 0 | logfile |
✘ | 7SA3 | 24943 | 2022-05-14 | 2021-09-22 | 2.25 | 1.86 | — | 2.2 | 0.022 | 2.27 | 0.0 | 0.08 | 19.95 | 0.01 | 1.206 | 11.63 | 4.04 | 3.7 | 96.0 | 0.2 | -1.16 | 0.78 | 0.84 | 4.95 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15960 | 1644 | 19 | 0 | 79 | 230 | 0 | logfile |
✔ | 7M4Z | 23671 | 2022-05-17 | 2021-03-22 | 2.92 | 1.87 | — | 1.6 | 0.007 | 0.56 | 0.0 | 0.04 | 15.16 | 0.02 | 1.833 | 4.66 | 0.00 | 3.0 | 96.9 | 0.2 | 1.09 | 0.77 | 0.72 | 2.81 | 2.5 | 0.008 | 0.78 | 2.0 | 0.04 | 16.16 | 0.01 | 1.709 | 7.63 | 1.68 | 3.3 | 96.5 | 0.2 | 0.34 | 0.35 | 0.79 | 0.75 | 2.67 | 138172 | 5625 | 70 | 4373 | 190 | 229 | 0 | logfile |
✔ | 6ZGL | 11210 | 2022-05-14 | 2020-06-19 | 1.9 | 1.87 | — | 1.9 | 0.013 | 1.55 | 0.0 | 0.12 | 15.52 | 0.01 | 2.196 | 9.41 | 3.73 | 1.1 | 98.9 | 0.0 | 0.13 | 0.73 | 0.83 | 7.03 | 1.9 | 0.003 | 0.56 | 0.0 | 0.04 | 15.75 | 0.00 | 2.118 | 4.99 | 1.00 | 0.6 | 99.4 | 0.0 | 3.59 | 0.75 | 0.76 | 0.83 | 7.07 | 15760 | 1848 | 24 | 0 | 0 | 964 | 0 | logfile |
✘ | 7D1T | 30547 | 2022-05-12 | 2020-09-15 | 1.95 | 1.88 | 1.89 | 1.9 | 0.020 | 1.91 | 31.0 | 0.10 | 18.53 | 0.02 | 1.200 | 3.45 | 2.40 | 1.9 | 97.9 | 0.2 | -0.93 | 0.77 | 0.85 | 6.98 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 52994 | 5312 | 108 | 0 | 196 | 2432 | 0 | logfile |
✔ | 6S61 | 10101 | 2022-05-14 | 2019-07-02 | 1.84 | 1.89 | 1.85 | 1.9 | 0.011 | 1.36 | 0.0 | 0.06 | 12.21 | 0.01 | 0.312 | 2.62 | 1.29 | 1.8 | 98.2 | 0.0 | 3.69 | 0.77 | 0.86 | 8.46 | 1.9 | 0.003 | 0.57 | 0.0 | 0.03 | 14.82 | 0.00 | 1.798 | 5.19 | 0.65 | 1.8 | 98.2 | 0.0 | 4.54 | 0.74 | 0.79 | 0.89 | 8.65 | 71060 | 4128 | 72 | 0 | 30 | 3854 | 32904 | logfile |
✔ | 7P6A | 13223 | 2022-05-12 | 2021-07-15 | 1.9 | 1.91 | 1.88 | 1.9 | 0.004 | 0.72 | 0.0 | 0.06 | 12.30 | 0.01 | 2.247 | 3.33 | 0.00 | 3.8 | 96.2 | 0.0 | -3.07 | 0.51 | 0.86 | 7.13 | 1.9 | 0.003 | 0.65 | 0.0 | 0.05 | 14.09 | 0.00 | 2.291 | 4.28 | 0.00 | 4.7 | 95.3 | 0.0 | -2.61 | 0.82 | 0.55 | 0.89 | 7.80 | 4166 | 540 | 10 | 0 | 0 | 76 | 0 | logfile |
✔ | 7RYG | 24739 | 2022-05-17 | 2021-08-25 | 2.38 | 1.92 | — | 2.2 | 0.006 | 0.63 | 0.0 | 0.07 | 15.89 | 0.02 | 1.799 | 3.80 | 2.32 | 2.6 | 97.2 | 0.1 | 1.15 | 0.77 | 0.74 | 3.06 | 1.6 | 0.007 | 0.91 | 0.0 | 0.05 | 16.36 | 0.01 | 1.723 | 5.37 | 4.22 | 3.4 | 96.5 | 0.1 | 0.14 | 1.13 | 0.79 | 0.77 | 3.19 | 137579 | 5505 | 55 | 4408 | 8 | 0 | 0 | logfile |
✘ | 7D1U | 30548 | 2022-05-18 | 2020-09-15 | 2.08 | 1.94 | 2.04 | 2.0 | 0.018 | 1.83 | 27.0 | 0.10 | 18.50 | 0.02 | 1.202 | 4.10 | 3.09 | 2.3 | 97.5 | 0.2 | -1.36 | 0.74 | 0.87 | 6.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 52655 | 5312 | 106 | 0 | 196 | 2121 | 0 | logfile |
✔ | 7RYH | 24740 | 2022-05-16 | 2021-08-25 | 2.43 | 1.94 | — | 2.2 | 0.005 | 0.63 | 0.0 | 0.07 | 15.90 | 0.02 | 1.844 | 3.81 | 2.55 | 2.2 | 97.7 | 0.1 | 1.17 | 0.77 | 0.74 | 2.99 | 1.6 | 0.005 | 0.78 | 0.0 | 0.05 | 16.18 | 0.01 | 1.851 | 5.60 | 4.94 | 2.7 | 97.1 | 0.1 | 0.53 | 0.29 | 0.78 | 0.76 | 3.01 | 135829 | 5499 | 53 | 4328 | 8 | 0 | 0 | logfile |
✔ | 7MiJ | 23853 | 2022-05-15 | 2021-04-17 | 1.98 | 1.95 | — | 2.0 | 0.010 | 1.38 | 4.0 | 0.05 | 19.92 | 0.01 | 2.320 | 3.08 | 0.18 | 2.8 | 97.2 | 0.0 | -3.96 | 0.75 | 0.81 | 5.48 | 2.0 | 0.003 | 0.58 | 0.0 | 0.04 | 18.50 | 0.00 | 2.156 | 4.67 | 1.18 | 2.8 | 97.2 | 0.0 | 1.00 | 1.08 | 0.77 | 0.82 | 4.97 | 23010 | 2556 | 12 | 0 | 38 | 328 | 0 | logfile |
✔ | 7P13 | 13154 | 2022-05-13 | 2021-07-01 | 2.29 | 1.96 | 2.28 | 1.7 | 0.016 | 1.06 | 0.0 | 0.07 | 14.07 | 0.01 | 2.430 | 5.24 | 0.00 | 3.3 | 96.7 | 0.0 | 2.06 | 0.82 | 0.87 | 4.22 | 1.7 | 0.004 | 0.52 | 0.0 | 0.04 | 17.33 | 0.00 | 2.087 | 15.59 | 1.88 | 2.8 | 97.2 | 0.0 | 4.89 | 0.51 | 0.84 | 0.88 | 3.66 | 13727 | 1743 | 7 | 0 | 0 | 0 | 154 | logfile |
✔ | 7SiL | 25143 | 2022-05-13 | 2021-10-14 | 2.7 | 1.97 | — | 1.5 | 0.004 | 0.72 | 0.0 | 0.05 | 13.50 | 0.00 | 2.160 | 6.73 | 0.15 | 2.1 | 97.9 | 0.0 | 0.60 | 0.75 | 0.72 | 3.10 | 1.6 | 0.009 | 1.04 | 1.0 | 0.05 | 15.86 | 0.00 | 1.980 | 9.76 | 1.11 | 2.8 | 97.2 | 0.0 | 0.40 | 0.34 | 0.77 | 0.77 | 3.05 | 12924 | 1564 | 8 | 0 | 34 | 0 | 0 | logfile |
✔ | 7P6B | 13224 | 2022-05-12 | 2021-07-15 | 2.2 | 1.98 | 2.14 | 2.1 | 0.004 | 0.75 | 0.0 | 0.09 | 13.80 | 0.01 | 2.246 | 4.21 | 0.00 | 3.8 | 96.2 | 0.0 | -2.60 | 0.48 | 0.85 | 6.24 | 2.0 | 0.006 | 0.70 | 0.0 | 0.05 | 17.13 | 0.00 | 2.107 | 8.18 | 0.65 | 4.7 | 95.3 | 0.0 | -2.26 | 0.86 | 0.49 | 0.88 | 6.83 | 4060 | 540 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PBW | 13307 | 2022-05-13 | 2021-08-02 | 2.1 | 1.98 | — | 2.1 | 0.015 | 4.32 | 0.0 | 0.05 | 16.89 | 0.01 | 2.243 | 2.93 | 0.00 | 0.0 | 100.0 | 0.0 | 3.14 | 0.78 | 0.90 | 7.90 | 2.1 | 0.005 | 2.36 | 0.0 | 0.04 | 16.71 | 0.01 | 2.127 | 7.68 | 0.15 | 0.0 | 100.0 | 0.0 | 4.33 | 0.30 | 0.77 | 0.89 | 7.33 | 9500 | 873 | 54 | 0 | 81 | 230 | 0 | logfile |