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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6M5G | 30085 | 2024-03-17 | 2020-03-10 | 3.6 | 3.74 | — | 3.6 | 0.010 | 0.82 | 0.0 | 0.05 | 13.87 | 0.00 | 1.951 | 11.79 | 9.29 | 9.4 | 90.4 | 0.2 | -3.64 | 0.74 | 0.90 | 1.98 | 3.6 | 0.003 | 0.61 | 0.0 | 0.04 | 15.10 | 0.00 | 1.988 | 9.41 | 4.01 | 4.6 | 95.3 | 0.0 | -0.89 | 1.45 | 0.73 | 0.89 | 1.70 | 17363 | 2204 | 13 | 0 | 10 | 0 | 0 | logfile |
✔ | 8A7T | 15225 | 2024-03-10 | 2022-06-21 | 3.0 | 2.93 | 3.07 | 3.2 | 0.003 | 0.46 | 0.0 | 0.04 | 8.48 | 0.00 | 2.302 | 5.04 | 0.00 | 2.8 | 97.2 | 0.0 | -4.48 | 0.39 | 0.85 | 4.72 | 3.2 | 0.005 | 0.67 | 0.0 | 0.04 | 15.85 | 0.00 | 2.226 | 8.96 | 4.29 | 3.5 | 96.5 | 0.0 | -4.03 | 1.15 | 0.43 | 0.89 | 4.90 | 3702 | 444 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FRS | 29406 | 2024-03-21 | 2023-01-08 | 3.96 | 3.29 | 3.03 | 3.2 | 0.002 | 0.54 | 0.0 | 0.04 | 14.45 | 0.00 | 2.208 | 5.19 | 0.00 | 7.1 | 92.6 | 0.3 | -1.68 | 0.40 | 0.86 | 3.34 | 3.2 | 0.002 | 0.56 | 0.0 | 0.04 | 15.83 | 0.00 | 2.205 | 5.62 | 1.14 | 7.6 | 92.2 | 0.2 | -1.61 | 0.29 | 0.41 | 0.87 | 2.85 | 31497 | 4120 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 5YRN | 6842 | 2024-03-11 | 2017-11-09 | 4.1 | 3.09 | 3.51 | 6.7 | 0.007 | 1.00 | 0.0 | 0.05 | 10.65 | 0.00 | 2.371 | 8.18 | 0.00 | 4.7 | 95.3 | 0.0 | -3.39 | 0.53 | 0.56 | — | 3.7 | 0.004 | 0.87 | 0.0 | 0.05 | 14.72 | 0.00 | 2.096 | 25.75 | 0.00 | 3.6 | 96.4 | 0.0 | -0.90 | 3.00 | 0.64 | 0.81 | — | 8280 | 1044 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 8iC0 | 35351 | 2024-03-14 | 2023-02-10 | 3.41 | 3.75 | 3.43 | 3.8 | 0.003 | 0.55 | 0.0 | 0.04 | 13.84 | 0.00 | 2.163 | 8.36 | 0.10 | 4.3 | 95.7 | 0.0 | -1.57 | 0.64 | 0.75 | 2.29 | 3.8 | 0.002 | 0.59 | 0.0 | 0.04 | 16.02 | 0.00 | 2.107 | 9.78 | 1.95 | 3.6 | 96.4 | 0.0 | -0.73 | 0.42 | 0.61 | 0.74 | 1.76 | 9553 | 1228 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WL0 | 21814 | 2024-03-15 | 2020-04-17 | 4.4 | 4.62 | — | 4.4 | 0.006 | 0.82 | 0.0 | 0.04 | 18.91 | 0.00 | 2.353 | 8.18 | 0.00 | 0.0 | 100.0 | 0.0 | -5.48 | 0.79 | 0.88 | — | 4.4 | 0.004 | 0.94 | 0.0 | 0.04 | 14.24 | 0.00 | 2.079 | 18.82 | 0.18 | 0.1 | 99.9 | 0.0 | 0.62 | 1.63 | 0.79 | 0.86 | — | 11480 | 1476 | 41 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oVX | 17225 | 2024-03-11 | 2023-04-26 | 3.4 | 4.18 | 3.32 | 3.7 | 0.004 | 0.98 | 0.0 | 0.05 | 13.53 | 0.00 | 2.209 | 6.80 | 0.00 | 4.8 | 95.2 | 0.0 | -1.04 | 0.80 | 0.70 | 1.05 | 3.8 | 0.003 | 0.73 | 0.0 | 0.04 | 15.86 | 0.00 | 2.094 | 16.38 | 2.99 | 4.8 | 95.2 | 0.0 | 0.84 | 0.65 | 0.82 | 0.72 | 1.17 | 6763 | 885 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Xo0 | 33332 | 2024-03-10 | 2022-04-30 | 3.0 | 2.48 | 1.85 | 3.1 | 0.001 | 0.39 | 0.0 | 0.05 | 16.62 | 0.00 | 2.280 | 4.76 | 0.00 | 5.0 | 95.0 | 0.0 | -2.66 | 0.47 | 0.87 | 7.11 | 3.1 | 0.005 | 0.49 | 0.0 | 0.05 | 17.10 | 0.00 | 2.237 | 6.29 | 2.71 | 9.2 | 90.8 | 0.0 | -2.93 | 0.30 | 0.47 | 0.88 | 6.95 | 2550 | 372 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8iXK | 35794 | 2024-03-16 | 2023-04-01 | 3.3 | 3.43 | 3.25 | 3.4 | 0.005 | 0.71 | 0.0 | 0.04 | 12.45 | 0.00 | 2.310 | 4.15 | 0.65 | 2.9 | 97.1 | 0.0 | 4.29 | 0.77 | 0.86 | 2.56 | 3.4 | 0.003 | 0.48 | 0.0 | 0.03 | 14.98 | 0.00 | 2.232 | 6.09 | 1.43 | 1.3 | 98.7 | 0.0 | 4.69 | 0.37 | 0.76 | 0.87 | 2.16 | 14790 | 1950 | 25 | 0 | 0 | 0 | 0 | logfile |
✔ | 8ooY | 17033 | 2024-03-10 | 2023-04-06 | 4.0 | 3.79 | 3.92 | 3.7 | 0.004 | 0.68 | 0.0 | 0.04 | 20.02 | 0.00 | 2.016 | 12.57 | 0.79 | 5.1 | 94.9 | 0.0 | -0.97 | 0.81 | 0.77 | — | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 21.35 | 0.00 | 2.143 | 12.31 | 2.76 | 5.3 | 94.7 | 0.0 | 0.12 | 0.40 | 0.81 | 0.77 | — | 5828 | 604 | 5 | 51 | 1 | 0 | 0 | logfile |
✔ | 7YK2 | 33884 | 2024-03-10 | 2022-07-21 | 2.8 | 2.60 | 2.36 | 2.8 | 0.005 | 0.82 | 0.0 | 0.05 | 11.38 | 0.00 | 2.424 | 12.82 | 0.00 | 11.5 | 88.5 | 0.0 | -3.89 | 0.42 | 0.78 | 3.09 | 2.8 | 0.002 | 0.58 | 0.0 | 0.05 | 14.70 | 0.00 | 2.444 | 5.39 | 2.96 | 5.7 | 94.3 | 0.0 | -2.63 | 0.46 | 0.42 | 0.79 | 3.19 | 2628 | 378 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8HSi | 34998 | 2024-03-10 | 2022-12-19 | 3.1 | 3.78 | 3.14 | 3.6 | 0.005 | 0.85 | 1.0 | 0.05 | 19.62 | 0.00 | 2.299 | 14.97 | 0.00 | 5.5 | 94.5 | 0.0 | 0.27 | 0.64 | 0.80 | 2.26 | 3.6 | 0.004 | 0.61 | 0.0 | 0.04 | 14.58 | 0.00 | 2.291 | 6.85 | 1.95 | 5.5 | 94.5 | 0.0 | 0.03 | 0.45 | 0.66 | 0.85 | 2.85 | 3516 | 405 | 5 | 0 | 10 | 0 | 0 | logfile |
✔ | 8HNV | 34919 | 2024-03-14 | 2022-12-08 | 3.1 | 2.71 | 3.05 | 2.9 | 0.002 | 0.57 | 0.0 | 0.04 | 20.86 | 0.00 | 2.103 | 11.63 | 0.00 | 4.3 | 95.7 | 0.0 | -0.35 | 0.57 | 0.66 | 1.19 | 2.9 | 0.003 | 0.86 | 1.0 | 0.04 | 21.64 | 0.00 | 2.105 | 12.44 | 2.06 | 6.4 | 93.6 | 0.0 | -0.14 | 1.53 | 0.59 | 0.71 | 1.20 | 9196 | 832 | 5 | 128 | 0 | 0 | 0 | logfile |
✔ | 8PTJ | 17872 | 2024-03-17 | 2023-07-14 | 2.86 | 2.81 | 2.75 | 2.9 | 0.004 | 0.48 | 0.0 | 0.04 | 17.88 | 0.00 | 2.035 | 3.52 | 2.82 | 4.5 | 95.5 | 0.0 | 1.19 | 0.76 | 0.89 | 3.52 | 2.8 | 0.003 | 0.48 | 0.0 | 0.04 | 17.84 | 0.00 | 2.071 | 3.74 | 2.82 | 5.0 | 95.0 | 0.0 | 1.23 | 0.90 | 0.75 | 0.90 | 3.39 | 17874 | 1102 | 7 | 15 | 1 | 2 | 8841 | logfile |
✔ | 7P65 | 13218 | 2024-03-10 | 2021-07-15 | 2.7 | 2.87 | 2.60 | 2.8 | 0.004 | 0.63 | 0.0 | 0.05 | 12.60 | 0.00 | 2.381 | 2.01 | 0.00 | 2.8 | 97.2 | 0.0 | -2.90 | 0.55 | 0.86 | 5.81 | 2.8 | 0.008 | 0.71 | 0.0 | 0.05 | 15.63 | 0.00 | 2.295 | 5.79 | 0.84 | 3.7 | 96.3 | 0.0 | -2.90 | 0.47 | 0.48 | 0.88 | 5.24 | 4145 | 550 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DST | 27688 | 2024-03-10 | 2022-07-22 | 3.2 | 2.71 | 2.73 | 3.4 | 0.046 | 2.10 | 0.0 | 0.03 | 22.27 | 0.00 | 2.205 | 41.47 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.44 | 0.57 | — | 2.4 | 0.136 | 9.30 | 191.0 | 0.34 | 28.93 | 0.03 | 1.065 | 133.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.16 | 0.55 | 0.80 | — | 3078 | 0 | 54 | 0 | 270 | 0 | 0 | logfile |
✔ | 8BYN | 16329 | 2024-03-10 | 2022-12-13 | 2.6 | 2.60 | 2.45 | 2.5 | 0.010 | 1.13 | 0.0 | 0.05 | 14.76 | 0.00 | 2.417 | 6.44 | 0.00 | 1.4 | 98.6 | 0.0 | -1.93 | 0.45 | 0.92 | 7.24 | 2.5 | 0.004 | 0.54 | 0.0 | 0.05 | 18.13 | 0.00 | 2.259 | 2.66 | 1.26 | 1.4 | 98.6 | 0.0 | -1.54 | 0.43 | 0.43 | 0.93 | 6.44 | 3564 | 450 | 10 | 0 | 6 | 0 | 0 | logfile |
✔ | 7P67 | 13220 | 2024-03-11 | 2021-07-15 | 3.1 | 3.08 | 2.94 | 3.2 | 0.007 | 1.06 | 0.0 | 0.09 | 11.98 | 0.00 | 2.338 | 3.61 | 0.00 | 4.7 | 95.3 | 0.0 | -3.19 | 0.49 | 0.83 | 4.12 | 3.1 | 0.003 | 0.64 | 0.0 | 0.05 | 14.87 | 0.00 | 2.130 | 10.10 | 2.58 | 5.5 | 94.5 | 0.0 | -3.27 | 2.47 | 0.43 | 0.84 | 4.54 | 8120 | 1080 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 8GMT | 34153 | 2024-03-10 | 2022-08-22 | 3.31 | 2.91 | 3.22 | 3.2 | 0.003 | 0.52 | 0.0 | 0.04 | 18.12 | 0.00 | 1.995 | 6.94 | 0.32 | 1.8 | 98.2 | 0.0 | 1.01 | 0.43 | 0.80 | 1.29 | 3.2 | 0.003 | 0.48 | 0.0 | 0.04 | 18.14 | 0.00 | 2.008 | 6.70 | 2.68 | 1.5 | 98.5 | 0.0 | 0.73 | 0.35 | 0.41 | 0.81 | 1.88 | 6172 | 796 | 7 | 6 | 4 | 0 | 0 | logfile |
✔ | 6TZ5 | 20589 | 2024-03-19 | 2019-08-10 | 3.1 | 3.56 | 3.05 | 3.7 | 0.003 | 0.51 | 0.0 | 0.04 | 14.11 | 0.00 | 2.220 | 7.23 | 0.00 | 1.1 | 98.9 | 0.0 | 0.24 | 0.40 | 0.55 | -0.21 | 3.4 | 0.003 | 0.76 | 0.0 | 0.04 | 18.85 | 0.00 | 2.077 | 13.60 | 3.88 | 1.5 | 98.5 | 0.0 | 3.60 | 1.61 | 0.50 | 0.84 | 0.87 | 93500 | 12104 | 68 | 0 | 0 | 0 | 0 | logfile |