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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7Li7 | 23362 | 2023-09-28 | 2021-01-26 | 4.1 | 4.15 | — | 4.2 | 0.002 | 0.61 | 0.0 | 0.06 | 12.21 | 0.00 | 2.297 | 10.16 | 0.00 | 4.2 | 95.8 | 0.0 | -2.70 | 0.52 | 0.67 | — | 4.1 | 0.003 | 0.66 | 0.0 | 0.04 | 12.76 | 0.00 | 2.215 | 13.30 | 0.00 | 5.8 | 94.2 | 0.0 | -1.41 | 0.98 | 0.66 | 0.77 | — | 6177 | 765 | 5 | 0 | 13 | 0 | 0 | logfile |
✔ | 7BJ2 | 12193 | 2023-09-29 | 2021-01-13 | 3.0 | 3.64 | 3.01 | 3.2 | 0.003 | 0.62 | 0.0 | 0.04 | 14.87 | 0.00 | 2.246 | 12.91 | 0.00 | 4.0 | 96.0 | 0.0 | 0.20 | 0.72 | 0.80 | 2.36 | 3.2 | 0.007 | 0.70 | 0.0 | 0.04 | 16.76 | 0.00 | 2.230 | 13.68 | 1.03 | 5.9 | 94.1 | 0.0 | -0.07 | 0.53 | 0.74 | 0.91 | 2.91 | 58552 | 7956 | 26 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SC0 | 25007 | 2023-09-30 | 2021-09-26 | 3.4 | 3.72 | — | 3.8 | 0.003 | 0.52 | 0.0 | 0.04 | 10.01 | 0.00 | 2.479 | 1.29 | 0.00 | 7.9 | 92.1 | 0.0 | -2.84 | 0.69 | 0.81 | 2.75 | 3.8 | 0.003 | 0.59 | 0.0 | 0.04 | 14.15 | 0.00 | 2.371 | 1.37 | 0.54 | 9.0 | 90.2 | 0.8 | -0.63 | 1.49 | 0.68 | 0.82 | 2.11 | 11638 | 1419 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 7X1W | 32951 | 2023-09-29 | 2022-02-24 | 3.3 | 3.45 | — | 3.4 | 0.007 | 0.76 | 0.0 | 0.04 | 14.72 | 0.00 | 2.163 | 7.80 | 0.00 | 6.5 | 93.5 | 0.0 | -0.77 | 0.64 | 0.83 | 2.49 | 3.4 | 0.002 | 0.55 | 0.0 | 0.04 | 16.01 | 0.00 | 2.277 | 7.64 | 0.10 | 5.2 | 94.8 | 0.0 | 0.37 | 1.90 | 0.63 | 0.84 | 1.87 | 9315 | 1159 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8A1R | 15084 | 2023-09-29 | 2022-06-01 | 3.6 | 5.63 | 3.62 | 3.4 | 0.014 | 1.35 | 0.0 | 0.05 | 15.14 | 0.00 | 2.097 | 11.72 | 0.00 | 5.2 | 94.8 | 0.0 | -0.06 | 0.91 | 0.75 | -0.28 | 3.5 | 0.003 | 0.77 | 1.0 | 0.05 | 16.10 | 0.00 | 2.170 | 19.32 | 0.41 | 5.9 | 94.1 | 0.0 | -0.55 | 0.61 | 0.95 | 0.86 | -0.05 | 9286 | 1186 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7WRi | 32727 | 2023-09-28 | 2022-01-26 | 3.03 | 3.18 | — | 3.2 | 0.003 | 0.58 | 1.0 | 0.04 | 15.51 | 0.00 | 2.099 | 6.76 | 2.03 | 6.0 | 94.0 | 0.0 | -4.19 | 0.73 | 0.80 | 2.23 | 3.1 | 0.002 | 0.57 | 0.0 | 0.04 | 16.69 | 0.00 | 2.091 | 8.27 | 0.00 | 6.6 | 93.4 | 0.0 | -0.56 | 0.40 | 0.74 | 0.83 | 1.87 | 6431 | 790 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7WL7 | 32576 | 2023-09-30 | 2022-01-12 | 3.51 | 3.41 | — | 3.5 | 0.002 | 0.50 | 0.0 | 0.04 | 8.84 | 0.00 | 2.214 | 5.97 | 3.39 | 4.6 | 95.3 | 0.1 | -3.63 | 0.79 | 0.77 | 2.09 | 3.5 | 0.004 | 0.96 | 0.0 | 0.05 | 14.50 | 0.00 | 1.998 | 18.25 | 0.80 | 7.1 | 92.7 | 0.2 | -0.46 | 0.94 | 0.79 | 0.79 | 1.93 | 10198 | 1330 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NPW | 12524 | 2023-09-30 | 2021-02-28 | 3.99 | 4.53 | — | 4.3 | 0.003 | 0.67 | 0.0 | 0.04 | 13.77 | 0.00 | 2.290 | 12.91 | 0.00 | 3.3 | 96.7 | 0.0 | 0.92 | 0.52 | 0.76 | 1.58 | 4.3 | 0.003 | 0.78 | 0.0 | 0.05 | 16.19 | 0.00 | 2.160 | 16.52 | 0.66 | 4.0 | 96.0 | 0.0 | 0.75 | 0.62 | 0.56 | 0.81 | 1.26 | 9723 | 1278 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V22 | 31634 | 2023-09-27 | 2021-08-07 | 3.38 | 3.61 | — | 3.6 | 0.003 | 0.66 | 0.0 | 0.04 | 14.10 | 0.00 | 2.236 | 8.81 | 0.46 | 12.1 | 87.5 | 0.4 | -2.81 | 0.53 | 0.77 | 4.24 | 3.6 | 0.004 | 0.70 | 0.0 | 0.05 | 16.03 | 0.00 | 2.170 | 11.14 | 0.46 | 13.4 | 86.2 | 0.4 | -2.46 | 0.55 | 0.53 | 0.80 | 3.78 | 1958 | 240 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LBY | 23267 | 2023-09-30 | 2021-01-09 | 4.2 | 4.35 | — | 4.3 | 0.003 | 0.78 | 0.0 | 0.05 | 12.33 | 0.00 | 2.148 | 4.15 | 0.00 | 6.2 | 92.5 | 1.3 | -0.24 | 0.56 | 0.69 | — | 4.3 | 0.002 | 0.65 | 0.0 | 0.04 | 11.98 | 0.00 | 2.125 | 6.81 | 0.00 | 6.5 | 93.1 | 0.4 | 0.24 | 0.60 | 0.57 | 0.71 | — | 8800 | 1418 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WLE | 32583 | 2023-09-30 | 2022-01-13 | 3.62 | 3.17 | — | 3.3 | 0.003 | 0.50 | 0.0 | 0.04 | 9.91 | 0.00 | 2.240 | 9.09 | 5.25 | 6.1 | 93.9 | 0.0 | -3.62 | 0.78 | 0.75 | 1.67 | 3.3 | 0.004 | 0.88 | 0.0 | 0.05 | 14.75 | 0.00 | 2.079 | 20.16 | 0.53 | 7.2 | 92.8 | 0.0 | -0.82 | 1.84 | 0.80 | 0.78 | 1.55 | 10188 | 1324 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8HM0 | 34887 | 2023-09-30 | 2022-12-02 | 3.1 | 3.43 | 3.01 | 3.4 | 0.005 | 0.72 | 0.0 | 0.04 | 17.21 | 0.00 | 2.162 | 12.48 | 9.92 | 9.8 | 90.1 | 0.1 | -4.58 | 0.76 | 0.80 | 2.15 | 3.4 | 0.004 | 0.69 | 0.0 | 0.05 | 16.68 | 0.00 | 2.163 | 11.66 | 0.51 | 7.9 | 92.1 | 0.0 | -1.80 | 0.48 | 0.76 | 0.81 | 2.12 | 11331 | 1474 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V24 | 31636 | 2023-09-27 | 2021-08-07 | 3.29 | 3.50 | — | 3.4 | 0.006 | 0.80 | 0.0 | 0.05 | 13.64 | 0.00 | 2.164 | 12.03 | 0.24 | 11.3 | 88.7 | 0.0 | -1.86 | 0.67 | 0.83 | 3.60 | 3.4 | 0.005 | 0.69 | 0.0 | 0.04 | 15.40 | 0.00 | 2.137 | 11.23 | 0.00 | 10.4 | 89.6 | 0.0 | -1.14 | 0.40 | 0.66 | 0.84 | 3.54 | 3814 | 487 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Yoo | 33985 | 2023-09-29 | 2022-08-01 | 3.11 | 2.28 | — | 3.2 | 0.002 | 0.45 | 0.0 | 0.04 | 13.30 | 0.00 | 2.153 | 3.82 | 0.00 | 1.7 | 98.3 | 0.0 | -0.16 | 0.78 | 0.81 | 3.56 | 3.2 | 0.003 | 0.51 | 0.0 | 0.04 | 15.22 | 0.00 | 2.198 | 4.86 | 0.40 | 2.4 | 97.6 | 0.0 | 0.78 | 0.93 | 0.79 | 0.84 | 3.27 | 9188 | 1169 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZCF | 14629 | 2023-09-27 | 2022-03-28 | 4.0 | 4.23 | 3.97 | 4.2 | 0.003 | 0.66 | 0.0 | 0.04 | 14.12 | 0.00 | 2.089 | 10.15 | 0.56 | 14.8 | 85.2 | 0.0 | -2.45 | 0.67 | 0.71 | — | 4.2 | 0.004 | 0.77 | 0.0 | 0.05 | 16.06 | 0.00 | 2.129 | 14.91 | 1.40 | 19.8 | 80.2 | 0.0 | -3.01 | 0.62 | 0.70 | 0.78 | — | 3312 | 426 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 8iY6 | 35815 | 2023-09-28 | 2023-04-04 | 3.13 | 3.04 | 3.19 | 3.1 | 0.003 | 0.55 | 0.0 | 0.04 | 12.05 | 0.00 | 2.168 | 6.91 | 0.00 | 2.3 | 97.7 | 0.0 | 1.84 | 0.42 | 0.61 | 2.08 | 3.1 | 0.004 | 0.71 | 0.0 | 0.04 | 14.61 | 0.00 | 2.153 | 10.66 | 1.77 | 2.0 | 98.0 | 0.0 | 1.86 | 1.26 | 0.42 | 0.64 | 1.51 | 2495 | 314 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CUN | 30473 | 2023-09-29 | 2020-08-23 | 3.5 | 3.56 | — | 3.4 | 0.002 | 0.64 | 2.0 | 0.05 | 10.98 | 0.00 | 1.905 | 6.88 | 0.00 | 6.7 | 92.6 | 0.7 | -2.80 | 0.79 | 0.73 | 1.40 | 3.4 | 0.007 | 0.83 | 0.0 | 0.05 | 14.25 | 0.00 | 2.026 | 13.10 | 0.73 | 9.6 | 90.2 | 0.2 | -0.62 | 1.28 | 0.81 | 0.78 | 1.70 | 57642 | 7839 | 14 | 0 | 307 | 0 | 0 | logfile |
✔ | 8BCZ | 15971 | 2023-09-29 | 2022-10-17 | 2.9 | 3.19 | 2.92 | 3.2 | 0.003 | 0.49 | 0.0 | 0.04 | 9.57 | 0.00 | 2.204 | 6.10 | 1.18 | 2.8 | 97.2 | 0.0 | 0.33 | 0.65 | 0.83 | 4.65 | 3.2 | 0.003 | 0.56 | 0.0 | 0.04 | 13.91 | 0.00 | 2.142 | 6.64 | 3.01 | 3.0 | 97.0 | 0.0 | 0.66 | 0.88 | 0.63 | 0.83 | 4.16 | 8505 | 1100 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 6SGZ | 10191 | 2023-09-30 | 2019-08-05 | 3.9 | 4.15 | — | 4.0 | 0.003 | 0.70 | 0.0 | 0.04 | 13.52 | 0.00 | 2.203 | 12.28 | 0.00 | 10.3 | 89.4 | 0.3 | -4.16 | 0.66 | 0.82 | 1.40 | 4.0 | 0.003 | 0.75 | 0.0 | 0.04 | 15.36 | 0.00 | 2.142 | 12.06 | 0.26 | 9.3 | 90.6 | 0.1 | -0.34 | 1.26 | 0.65 | 0.82 | 1.16 | 11177 | 1505 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N95 | 24250 | 2023-09-28 | 2021-06-16 | 4.1 | 3.45 | — | 2.1 | 0.002 | 0.74 | 0.0 | 0.00 | 5.05 | 0.00 | 2.573 | 0.10 | 0.00 | 7.1 | 92.3 | 0.6 | -1.14 | 0.78 | 0.70 | — | 2.1 | 0.004 | 1.01 | 0.0 | 0.00 | 4.97 | 0.00 | 2.503 | 6.53 | 0.00 | 18.1 | 81.7 | 0.2 | -3.27 | 1.81 | 0.85 | 0.83 | — | 7299 | 2433 | 2 | 0 | 0 | 0 | 0 | logfile |