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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7PT7 | 13620 | 2023-11-16 | 2021-09-26 | 3.8 | 3.34 | — | 3.4 | 0.007 | 0.74 | 4.0 | 0.05 | 14.97 | 0.00 | 1.865 | 11.56 | 0.64 | 3.3 | 96.7 | 0.0 | 0.56 | 0.76 | 0.80 | 1.56 | 3.4 | 0.003 | 0.57 | 0.0 | 0.04 | 15.85 | 0.00 | 0.924 | 10.95 | 0.25 | 3.0 | 97.0 | 0.0 | 0.73 | 0.31 | 0.77 | 0.82 | 1.43 | 67420 | 8451 | 29 | 0 | 50 | 0 | 0 | logfile |
✔ | 7T22 | 25609 | 2023-11-18 | 2021-12-02 | 4.2 | 4.73 | — | 4.4 | 0.004 | 1.41 | 0.0 | 0.04 | 10.32 | 0.00 | 1.992 | 5.52 | 1.18 | 1.5 | 98.5 | 0.0 | 2.51 | 0.83 | 0.75 | — | 4.4 | 0.004 | 1.08 | 0.0 | 0.04 | 12.24 | 0.00 | 0.943 | 23.53 | 0.00 | 3.4 | 96.6 | 0.0 | 0.80 | 0.90 | 0.85 | 0.79 | — | 24536 | 3084 | 15 | 13 | 15 | 0 | 0 | logfile |
✔ | 7Qo1 | 14080 | 2023-11-16 | 2021-12-23 | 4.4 | 3.65 | 4.44 | 3.5 | 0.012 | 1.85 | 2.0 | 0.09 | 18.35 | 0.02 | 2.337 | 2.24 | 1.51 | 5.3 | 94.6 | 0.2 | -1.82 | 0.79 | 0.60 | — | 3.5 | 0.004 | 0.75 | 0.0 | 0.04 | 17.82 | 0.00 | 0.949 | 16.06 | 0.00 | 5.5 | 94.5 | 0.0 | -1.00 | 0.67 | 0.80 | 0.61 | — | 14179 | 1694 | 9 | 62 | 1 | 0 | 0 | logfile |
✔ | 6i0Y | 0322 | 2023-11-21 | 2018-10-26 | 3.2 | 4.80 | — | 4.7 | 0.010 | 1.49 | 8.0 | 0.07 | 15.55 | 0.01 | 0.682 | 13.02 | 11.41 | 16.0 | 77.5 | 6.5 | -5.00 | 0.59 | 0.58 | 0.26 | 4.7 | 0.008 | 0.95 | 0.0 | 0.05 | 16.40 | 0.01 | 0.954 | 26.63 | 1.60 | 14.9 | 83.3 | 1.9 | -2.98 | 1.62 | 0.61 | 0.74 | 0.68 | 93619 | 3551 | 48 | 3049 | 144 | 439 | 0 | logfile |
✔ | 5LMo | 4074 | 2023-11-13 | 2016-08-01 | 4.3 | 4.71 | 4.30 | 4.3 | 0.009 | 1.47 | 50.0 | 0.12 | 20.86 | 0.01 | 0.865 | 18.49 | 20.40 | 10.6 | 85.8 | 3.6 | -2.76 | 0.80 | 0.69 | — | 4.3 | 0.005 | 0.80 | 0.0 | 0.04 | 16.93 | 0.01 | 0.957 | 39.06 | 0.00 | 9.6 | 89.9 | 0.5 | -1.93 | 2.18 | 0.88 | 0.84 | — | 54110 | 2622 | 29 | 1533 | 110 | 0 | 0 | logfile |
✔ | 8A1T | 15088 | 2023-11-20 | 2022-06-02 | 3.37 | 2.93 | 3.53 | 3.1 | 0.004 | 0.52 | 0.0 | 0.04 | 15.83 | 0.00 | 2.002 | 4.51 | 0.00 | 2.2 | 97.8 | 0.0 | 1.51 | 0.58 | 0.77 | 2.16 | 3.2 | 0.003 | 0.53 | 0.0 | 0.04 | 16.44 | 0.00 | 0.962 | 8.76 | 0.00 | 3.5 | 96.5 | 0.0 | 0.65 | 0.50 | 0.59 | 0.78 | 1.83 | 29507 | 1889 | 11 | 0 | 14 | 0 | 14626 | logfile |
✔ | 7UiM | 26549 | 2023-11-16 | 2022-03-29 | 3.1 | 4.12 | 3.81 | 3.6 | 0.005 | 0.87 | 0.0 | 0.04 | 18.46 | 0.01 | 1.903 | 9.02 | 0.00 | 3.7 | 96.3 | 0.0 | -1.28 | 0.67 | 0.47 | 0.98 | 3.6 | 0.007 | 0.90 | 0.0 | 0.05 | 19.82 | 0.01 | 0.973 | 40.32 | 0.88 | 7.3 | 92.4 | 0.3 | -1.39 | 2.98 | 0.80 | 0.77 | 0.57 | 14772 | 387 | 3 | 541 | 15 | 0 | 0 | logfile |
✔ | 8H77 | 34519 | 2023-11-16 | 2022-10-19 | 3.2 | 2.74 | 3.17 | 3.1 | 0.005 | 0.84 | 0.0 | 0.05 | 15.36 | 0.00 | 1.365 | 13.60 | 0.12 | 5.1 | 94.9 | 0.0 | -1.57 | 0.59 | 0.67 | 2.51 | 3.1 | 0.004 | 0.66 | 0.0 | 0.04 | 17.53 | 0.00 | 0.978 | 10.16 | 0.29 | 4.2 | 95.8 | 0.0 | -0.93 | 0.69 | 0.69 | 0.77 | 2.13 | 15726 | 1930 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 5GAF | 8002 | 2023-11-21 | 2015-11-25 | 4.3 | 4.42 | — | 4.3 | 0.007 | 1.09 | 1.0 | 0.05 | 15.95 | 0.01 | 1.266 | 8.87 | 11.04 | 3.5 | 96.4 | 0.1 | -3.28 | 0.63 | 0.64 | — | 4.3 | 0.005 | 0.73 | 0.0 | 0.04 | 15.26 | 0.01 | 0.984 | 21.89 | 0.03 | 5.5 | 94.3 | 0.1 | -1.30 | 1.41 | 0.71 | 0.85 | — | 96182 | 3889 | 47 | 3049 | 452 | 0 | 0 | logfile |
✔ | 6TZ1 | 20586 | 2023-11-16 | 2019-08-09 | 3.4 | 3.44 | — | 3.4 | 0.008 | 0.92 | 0.0 | 0.05 | 10.34 | 0.01 | 2.207 | 4.35 | 0.47 | 5.1 | 94.9 | 0.0 | -3.92 | 0.54 | 0.85 | 3.95 | 3.4 | 0.004 | 0.61 | 0.0 | 0.04 | 14.56 | 0.00 | 0.990 | 6.95 | 0.54 | 4.2 | 95.8 | 0.0 | -0.48 | 1.24 | 0.53 | 0.88 | 3.22 | 14212 | 1709 | 5 | 23 | 1 | 0 | 0 | logfile |
✔ | 7NSH | 12567 | 2023-11-14 | 2021-03-07 | 3.2 | 3.39 | 3.12 | 3.3 | 0.003 | 0.53 | 0.0 | 0.05 | 15.69 | 0.00 | 1.187 | 7.76 | 0.02 | 4.2 | 95.8 | 0.1 | 0.71 | 0.80 | 0.84 | 2.70 | 3.3 | 0.004 | 0.59 | 0.0 | 0.04 | 17.00 | 0.00 | 0.997 | 8.56 | 0.42 | 4.6 | 95.4 | 0.0 | 0.63 | 1.22 | 0.79 | 0.90 | 2.61 | 112448 | 9643 | 79 | 1611 | 229 | 2 | 0 | logfile |
✔ | 7TRG | 26089 | 2023-11-21 | 2022-01-28 | 3.0 | 3.44 | — | 3.3 | 0.005 | 0.68 | 1.0 | 0.04 | 15.52 | 0.00 | 1.932 | 4.57 | 0.19 | 3.8 | 96.2 | 0.0 | 1.26 | 0.64 | 0.86 | 2.32 | 3.3 | 0.004 | 0.63 | 0.0 | 0.04 | 16.31 | 0.00 | 1.010 | 4.53 | 1.26 | 4.0 | 96.0 | 0.0 | 0.81 | 1.14 | 0.63 | 0.87 | 2.05 | 33714 | 4377 | 25 | 0 | 24 | 8 | 0 | logfile |
✔ | 5GAG | 8003 | 2023-11-21 | 2015-11-26 | 3.8 | 3.95 | — | 3.8 | 0.007 | 1.04 | 1.0 | 0.05 | 15.71 | 0.00 | 1.789 | 8.16 | 9.03 | 3.0 | 96.9 | 0.1 | -3.35 | 0.79 | 0.90 | 1.98 | 3.8 | 0.005 | 0.65 | 0.0 | 0.04 | 15.28 | 0.01 | 1.012 | 15.42 | 0.69 | 3.7 | 96.2 | 0.1 | -0.65 | 0.68 | 0.78 | 0.88 | 2.04 | 94030 | 3598 | 46 | 3049 | 473 | 0 | 0 | logfile |
✔ | 7Y41 | 33599 | 2023-11-21 | 2022-06-13 | 4.1 | 4.02 | 3.07 | 3.4 | 0.004 | 0.63 | 0.0 | 0.03 | 16.59 | 0.01 | 1.204 | 15.20 | 0.00 | 4.4 | 95.6 | 0.0 | -0.39 | 0.87 | 0.86 | — | 3.4 | 0.005 | 0.65 | 0.0 | 0.04 | 16.35 | 0.01 | 1.024 | 15.19 | 0.00 | 5.1 | 94.9 | 0.0 | -0.58 | 1.48 | 0.88 | 0.87 | — | 97056 | 3529 | 46 | 3237 | 411 | 0 | 0 | logfile |
✔ | 6ZXF | 11519 | 2023-11-19 | 2020-07-29 | 3.7 | 3.68 | 3.69 | 3.5 | 0.010 | 0.98 | 0.0 | 0.05 | 16.80 | 0.01 | 1.937 | 8.48 | 0.65 | 8.5 | 91.5 | 0.0 | -3.70 | 0.87 | 0.81 | 1.63 | 3.4 | 0.005 | 0.69 | 0.0 | 0.04 | 17.00 | 0.00 | 1.027 | 16.14 | 0.78 | 6.2 | 93.8 | 0.0 | -1.09 | 0.57 | 0.87 | 0.82 | 1.53 | 80133 | 5758 | 41 | 1656 | 6 | 0 | 0 | logfile |
✔ | 7o5H | 12736 | 2023-11-21 | 2021-04-08 | 3.1 | 2.93 | 3.04 | 2.8 | 0.002 | 0.33 | 0.0 | 0.03 | 12.30 | 0.00 | 1.262 | 5.88 | 0.98 | 2.1 | 97.9 | 0.0 | 1.09 | 0.86 | 0.83 | 1.84 | 2.8 | 0.009 | 0.81 | 0.0 | 0.05 | 15.02 | 0.01 | 1.028 | 14.99 | 0.84 | 5.1 | 94.9 | 0.0 | -0.32 | 1.49 | 0.87 | 0.86 | 1.38 | 34436 | 1730 | 22 | 964 | 167 | 0 | 0 | logfile |
✔ | 8E5L | 27914 | 2023-11-17 | 2022-08-22 | 4.2 | 8.91 | 5.82 | 7.6 | 0.003 | 0.64 | 0.0 | 0.04 | 11.68 | 0.00 | 1.299 | 26.62 | 1.63 | 1.3 | 98.4 | 0.3 | -0.83 | 0.63 | 0.37 | — | 7.5 | 0.002 | 0.65 | 0.0 | 0.04 | 12.02 | 0.00 | 1.046 | 16.48 | 0.00 | 2.4 | 97.6 | 0.0 | 0.49 | 1.33 | 0.89 | 0.83 | — | 20058 | 2502 | 13 | 9 | 18 | 0 | 0 | logfile |
✔ | 5T62 | 8362 | 2023-11-18 | 2016-09-01 | 3.3 | 3.38 | — | 3.4 | 0.007 | 1.13 | 5.0 | 0.09 | 17.39 | 0.01 | 1.390 | 1.88 | 6.32 | 8.1 | 89.7 | 2.2 | -4.03 | 0.68 | 0.78 | 3.21 | 3.3 | 0.005 | 0.70 | 0.0 | 0.04 | 16.38 | 0.01 | 1.047 | 5.65 | 0.62 | 7.2 | 92.1 | 0.6 | -1.52 | 0.70 | 0.80 | 0.87 | 2.54 | 131766 | 7061 | 57 | 3483 | 438 | 6 | 0 | logfile |
✔ | 6VQT | 21356 | 2023-11-14 | 2020-02-05 | 3.03 | 4.54 | 3.09 | 4.1 | 0.009 | 1.15 | 0.0 | 0.06 | 16.32 | 0.01 | 1.733 | 10.32 | 4.94 | 2.7 | 97.3 | 0.0 | 1.39 | 0.78 | 0.80 | 1.43 | 4.1 | 0.003 | 0.74 | 0.0 | 0.04 | 16.60 | 0.00 | 1.052 | 9.77 | 0.32 | 3.0 | 97.0 | 0.0 | 2.30 | 1.06 | 0.77 | 0.84 | 1.48 | 9144 | 1168 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 5XYM | 6789 | 2023-11-20 | 2017-07-09 | 3.08 | 3.42 | — | 3.4 | 0.006 | 1.01 | 7.0 | 0.10 | 16.02 | 0.00 | 1.297 | 4.08 | 2.56 | 7.8 | 89.6 | 2.5 | -3.59 | 0.66 | 0.78 | 3.19 | 3.4 | 0.005 | 0.69 | 0.0 | 0.04 | 15.72 | 0.01 | 1.052 | 7.86 | 0.71 | 8.7 | 90.1 | 1.2 | -1.94 | 1.41 | 0.75 | 0.85 | 2.53 | 84069 | 3122 | 32 | 2781 | 146 | 0 | 0 | logfile |