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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6AP1 | 8887 | 2024-03-17 | 2017-08-16 | 3.2 | 3.26 | — | 3.3 | 0.016 | 1.66 | 2.0 | 0.09 | 14.24 | 0.01 | 1.198 | 24.32 | 3.62 | 10.9 | 87.0 | 2.1 | -4.53 | 0.62 | 0.58 | 1.49 | 3.2 | 0.003 | 0.70 | 0.0 | 0.04 | 16.50 | 0.00 | 0.830 | 10.28 | 1.71 | 5.1 | 94.6 | 0.2 | 0.86 | 2.40 | 0.70 | 0.69 | 1.26 | 18838 | 2404 | 24 | 0 | 14 | 0 | 0 | logfile |
✔ | 7NSH | 12567 | 2024-03-12 | 2021-03-07 | 3.2 | 3.39 | 3.12 | 3.3 | 0.003 | 0.54 | 0.0 | 0.05 | 19.44 | 0.00 | 1.187 | 7.76 | 0.02 | 4.2 | 95.8 | 0.1 | 0.71 | 0.80 | 0.84 | 2.70 | 3.3 | 0.009 | 0.75 | 0.0 | 0.05 | 20.18 | 0.01 | 0.874 | 8.89 | 2.29 | 5.4 | 94.6 | 0.0 | 0.37 | 1.22 | 0.80 | 0.90 | 2.66 | 112448 | 9643 | 79 | 1611 | 229 | 2 | 0 | logfile |
✔ | 8UXX | 42788 | 2024-03-17 | 2023-11-11 | 3.2 | 3.48 | 3.27 | 3.5 | 0.012 | 1.91 | 8.0 | 0.10 | 15.07 | 0.02 | 1.821 | 0.17 | 2.29 | 4.4 | 95.5 | 0.1 | -2.07 | 0.64 | 0.74 | 3.38 | 3.5 | 0.004 | 0.70 | 1.0 | 0.04 | 15.81 | 0.00 | 0.884 | 6.44 | 1.67 | 3.4 | 96.6 | 0.0 | -0.42 | 2.06 | 0.72 | 0.84 | 2.59 | 77330 | 4916 | 26 | 0 | 27 | 5 | 38268 | logfile |
✔ | 6NDY | 0443 | 2024-03-15 | 2018-12-14 | 3.6 | 3.70 | — | 3.6 | 0.005 | 0.89 | 0.0 | 0.05 | 14.71 | 0.01 | 2.037 | 4.67 | 0.00 | 5.9 | 94.1 | 0.0 | -3.78 | 0.66 | 0.54 | 0.23 | 3.6 | 0.003 | 0.71 | 0.0 | 0.04 | 16.25 | 0.00 | 0.891 | 12.65 | 1.55 | 5.8 | 94.2 | 0.0 | -0.19 | 1.31 | 0.79 | 0.81 | 1.00 | 12531 | 1596 | 11 | 0 | 20 | 0 | 0 | logfile |
✔ | 8T2T | 40987 | 2024-03-16 | 2023-06-06 | 3.0 | 3.39 | 3.19 | 9.5 | 0.006 | 0.97 | 0.0 | 0.05 | 24.84 | 0.01 | 1.982 | 4.25 | 0.00 | 4.5 | 95.0 | 0.5 | -1.78 | 0.45 | 0.06 | 0.14 | 3.0 | 0.007 | 1.28 | 0.0 | 0.06 | 26.99 | 0.01 | 0.920 | 37.81 | 5.28 | 4.7 | 95.3 | 0.0 | -2.15 | 2.56 | 0.75 | 0.71 | 1.29 | 14876 | 387 | 5 | 546 | 12 | 0 | 0 | logfile |
✔ | 8A1T | 15088 | 2024-03-21 | 2022-06-02 | 3.37 | 2.93 | 3.53 | 3.1 | 0.004 | 0.52 | 0.0 | 0.04 | 17.34 | 0.00 | 2.002 | 4.51 | 0.00 | 2.2 | 97.8 | 0.0 | 1.51 | 0.58 | 0.77 | 2.16 | 3.1 | 0.005 | 0.56 | 0.0 | 0.04 | 16.68 | 0.00 | 0.920 | 9.42 | 2.14 | 3.5 | 96.5 | 0.0 | 0.32 | 0.47 | 0.58 | 0.78 | 1.96 | 29507 | 1889 | 11 | 0 | 14 | 0 | 14626 | logfile |
✔ | 8BA8 | 15940 | 2024-03-11 | 2022-10-11 | 3.4 | 3.96 | 3.30 | 3.3 | 0.004 | 0.77 | 0.0 | 0.04 | 16.39 | 0.01 | 0.942 | 10.49 | 0.07 | 5.8 | 94.2 | 0.0 | -2.24 | 0.89 | 0.85 | 2.19 | 3.3 | 0.003 | 0.63 | 0.0 | 0.04 | 15.74 | 0.00 | 0.932 | 10.12 | 0.94 | 2.7 | 97.3 | 0.0 | 1.94 | 0.43 | 0.90 | 0.86 | 1.89 | 110159 | 7336 | 35 | 0 | 49 | 7 | 55734 | logfile |
✔ | 7NYX | 12657 | 2024-03-15 | 2021-03-23 | 4.6 | 7.95 | 4.57 | 3.3 | 0.003 | 0.61 | 0.0 | 0.04 | 17.46 | 0.00 | 1.844 | 11.21 | 0.00 | 3.4 | 96.6 | 0.0 | 1.74 | 0.88 | 0.79 | — | 3.2 | 0.003 | 0.55 | 0.0 | 0.04 | 17.03 | 0.00 | 0.935 | 14.24 | 0.00 | 4.4 | 95.6 | 0.0 | 1.10 | 0.54 | 0.90 | 0.83 | — | 70784 | 4186 | 18 | 104 | 6 | 0 | 34688 | logfile |
✔ | 6oAB | 20000 | 2024-03-18 | 2019-03-15 | 3.6 | 3.87 | 3.73 | 3.8 | 0.006 | 1.07 | 1.0 | 0.05 | 16.24 | 0.01 | 1.245 | 9.38 | 0.34 | 7.7 | 92.1 | 0.2 | -5.58 | 0.68 | 0.68 | 0.81 | 3.7 | 0.003 | 0.85 | 0.0 | 0.05 | 17.33 | 0.00 | 0.938 | 14.37 | 2.39 | 8.9 | 91.0 | 0.1 | -1.74 | 1.80 | 0.73 | 0.79 | 1.30 | 19690 | 2537 | 11 | 0 | 18 | 0 | 0 | logfile |
✔ | 6i0Y | 0322 | 2024-03-19 | 2018-10-26 | 3.2 | 4.80 | — | 4.7 | 0.010 | 1.49 | 8.0 | 0.07 | 23.52 | 0.01 | 0.682 | 13.02 | 11.41 | 16.0 | 77.5 | 6.5 | -5.00 | 0.59 | 0.58 | 0.26 | 4.7 | 0.006 | 0.87 | 1.0 | 0.04 | 23.22 | 0.01 | 0.938 | 24.00 | 6.89 | 14.2 | 83.8 | 2.0 | -2.91 | 1.60 | 0.61 | 0.73 | 0.64 | 93619 | 3551 | 48 | 3049 | 144 | 439 | 0 | logfile |
✔ | 8XD6 | 38267 | 2024-03-10 | 2023-12-10 | 2.79 | 2.93 | 1.04 | 2.9 | 0.009 | 1.12 | 0.0 | 0.06 | 16.23 | 0.01 | 2.369 | 7.03 | 3.51 | 3.4 | 96.6 | 0.0 | 0.89 | 0.48 | 0.90 | 4.52 | 2.9 | 0.015 | 1.12 | 1.0 | 0.04 | 16.59 | 0.01 | 0.945 | 8.37 | 1.46 | 1.7 | 98.3 | 0.0 | 1.45 | 0.41 | 0.48 | 0.93 | 4.61 | 3402 | 419 | 2 | 0 | 4 | 44 | 0 | logfile |
✔ | 6Q97 | 4476 | 2024-03-03 | 2018-12-17 | 3.9 | 3.69 | — | 20.0 | 0.011 | 1.20 | 0.0 | 0.16 | 24.87 | 0.02 | 1.320 | 6.99 | 0.38 | 10.1 | 89.8 | 0.1 | -5.34 | 0.15 | 0.01 | 0.22 | 3.6 | 0.005 | 0.92 | 1.0 | 0.05 | 25.72 | 0.01 | 0.951 | 21.35 | 3.55 | 10.5 | 89.5 | 0.0 | -3.27 | 2.51 | 0.27 | 0.22 | 0.31 | 156609 | 6124 | 72 | 5051 | 441 | 2 | 0 | logfile |
✔ | 6YEY | 10797 | 2024-03-19 | 2020-03-25 | 3.7 | 4.01 | — | 3.7 | 0.006 | 0.81 | 0.0 | 0.05 | 14.56 | 0.01 | 2.255 | 6.61 | 8.11 | 7.3 | 92.6 | 0.1 | -3.07 | 0.88 | 0.85 | 1.80 | 3.7 | 0.003 | 0.66 | 2.0 | 0.04 | 15.35 | 0.00 | 0.951 | 12.31 | 2.91 | 7.0 | 93.0 | 0.0 | 0.41 | 2.78 | 0.89 | 0.86 | 1.48 | 93500 | 11685 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PJ6 | 20353 | 2024-03-02 | 2019-06-27 | 2.2 | 2.48 | — | 2.5 | 0.011 | 1.07 | 14.0 | 0.06 | 23.52 | 0.02 | 1.227 | 5.24 | 2.25 | 5.6 | 94.4 | 0.1 | -2.65 | 0.62 | 0.85 | 4.58 | 2.5 | 0.005 | 0.70 | 1.0 | 0.04 | 23.53 | 0.01 | 0.951 | 7.52 | 3.47 | 5.6 | 94.4 | 0.0 | -0.87 | 1.29 | 0.63 | 0.86 | 4.40 | 154542 | 3356 | 67 | 3016 | 187 | 3897 | 59624 | logfile |
✔ | 6FTJ | 4317 | 2024-03-28 | 2018-02-22 | 4.7 | 4.88 | — | 4.7 | 0.011 | 1.39 | 18.0 | 0.10 | 25.54 | 0.01 | 0.475 | 12.11 | 11.77 | 9.8 | 87.8 | 2.4 | -4.05 | 0.63 | 0.62 | — | 4.7 | 0.007 | 1.00 | 0.0 | 0.05 | 24.64 | 0.01 | 0.951 | 43.92 | 0.04 | 11.6 | 87.9 | 0.5 | -2.52 | 1.18 | 0.67 | 0.71 | — | 152111 | 8263 | 74 | 3938 | 461 | 0 | 0 | logfile |
✔ | 8SG8 | 40452 | 2024-03-14 | 2023-04-11 | 3.0 | 3.47 | 3.09 | 3.3 | 0.004 | 0.54 | 0.0 | 0.04 | 14.66 | 0.00 | 1.943 | 7.29 | 0.00 | 3.5 | 96.5 | 0.0 | 1.72 | 0.82 | 0.88 | 2.61 | 3.3 | 0.007 | 0.66 | 0.0 | 0.04 | 15.64 | 0.00 | 0.978 | 7.95 | 0.88 | 4.3 | 95.7 | 0.0 | 1.17 | 0.26 | 0.83 | 0.90 | 2.57 | 66839 | 8678 | 50 | 0 | 48 | 19 | 0 | logfile |
✔ | 6GEN | 4396 | 2024-03-25 | 2018-04-27 | 3.6 | 4.67 | — | 4.5 | 0.004 | 0.75 | 0.0 | 0.04 | 20.64 | 0.01 | 2.109 | 5.89 | 8.77 | 3.9 | 96.0 | 0.0 | -4.51 | 0.78 | 0.58 | -0.18 | 4.5 | 0.003 | 0.76 | 0.0 | 0.04 | 21.37 | 0.00 | 0.980 | 17.58 | 2.40 | 4.9 | 95.1 | 0.0 | -0.46 | 1.30 | 0.85 | 0.74 | -0.02 | 44481 | 4683 | 29 | 346 | 151 | 0 | 0 | logfile |
✔ | 7T22 | 25609 | 2024-03-19 | 2021-12-02 | 4.2 | 4.73 | — | 4.4 | 0.004 | 1.41 | 0.0 | 0.04 | 10.32 | 0.00 | 1.992 | 5.52 | 1.18 | 1.5 | 98.5 | 0.0 | 2.51 | 0.83 | 0.75 | — | 4.4 | 0.004 | 1.07 | 0.0 | 0.04 | 12.07 | 0.00 | 0.985 | 22.65 | 0.00 | 2.9 | 97.1 | 0.0 | 0.84 | 0.87 | 0.85 | 0.79 | — | 24536 | 3084 | 15 | 13 | 15 | 0 | 0 | logfile |
✔ | 7QWS | 14193 | 2024-03-18 | 2022-01-25 | 3.4 | 3.09 | — | 7.2 | 0.002 | 0.46 | 0.0 | 0.03 | 22.90 | 0.00 | 2.011 | 9.44 | 1.65 | 3.7 | 96.3 | 0.0 | 0.47 | 0.23 | 0.02 | -0.02 | 3.0 | 0.004 | 0.88 | 0.0 | 0.04 | 24.72 | 0.01 | 0.987 | 26.15 | 2.43 | 8.3 | 91.7 | 0.1 | -2.38 | 2.16 | 0.52 | 0.59 | 0.52 | 137913 | 7047 | 55 | 3769 | 126 | 0 | 0 | logfile |
✔ | 6GEJ | 4395 | 2024-03-24 | 2018-04-26 | 3.6 | 3.77 | — | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 18.74 | 0.00 | 1.491 | 9.10 | 3.93 | 4.6 | 95.4 | 0.0 | -2.70 | 0.82 | 0.77 | 0.98 | 3.7 | 0.003 | 0.63 | 0.0 | 0.04 | 20.57 | 0.00 | 0.988 | 10.08 | 3.41 | 4.0 | 96.0 | 0.0 | 0.18 | 0.79 | 0.83 | 0.79 | 0.99 | 43702 | 4683 | 29 | 308 | 151 | 0 | 0 | logfile |