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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6C9i | 7436 | 2022-05-15 | 2018-01-26 | 3.09 | 3.21 | — | 3.2 | 0.029 | 1.48 | 0.0 | 0.12 | 9.22 | 0.01 | 2.417 | 1.04 | 0.00 | 0.3 | 99.6 | 0.1 | 2.36 | 0.79 | 0.85 | 4.97 | 3.2 | 0.004 | 0.47 | 0.0 | 0.04 | 15.04 | 0.00 | 2.229 | 5.61 | 0.12 | 0.0 | 100.0 | 0.0 | 3.66 | 2.42 | 0.73 | 0.90 | 3.62 | 23700 | 3087 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 4UQ8 | 2676 | 2022-05-16 | 2014-06-21 | 4.95 | 5.05 | 4.64 | 4.9 | 0.012 | 2.07 | 23.0 | 1.38 | 6.71 | 0.01 | 1.032 | 64.12 | 25.00 | 0.0 | 0.0 | 0.0 | — | 0.57 | 0.75 | — | 4.9 | 0.013 | 2.54 | 0.0 | 0.41 | 5.50 | 0.00 | 2.100 | 23.02 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.11 | 0.61 | 0.83 | — | 28647 | 33 | 54 | 0 | 5686 | 0 | 0 | logfile |
✔ | 6X5i | 22051 | 2022-05-12 | 2020-05-26 | 4.3 | 4.27 | — | 4.0 | 0.061 | 3.24 | 210.0 | 0.20 | 32.42 | 0.00 | 2.206 | 29.57 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.70 | 0.70 | — | 4.0 | 0.010 | 1.61 | 210.0 | 0.14 | 27.26 | 0.00 | 1.233 | 70.93 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.50 | 0.68 | 0.73 | — | 4480 | 70 | 70 | 0 | 280 | 0 | 0 | logfile |
✔ | 6oEF | 20020 | 2022-05-18 | 2019-03-27 | 3.8 | 3.98 | — | 3.8 | 0.007 | 1.67 | 0.0 | 0.07 | 11.76 | 0.01 | 2.376 | 3.96 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.47 | 0.78 | — | 3.8 | 0.006 | 1.21 | 0.0 | 0.05 | 6.00 | 0.00 | 2.198 | 8.14 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.58 | 0.49 | 0.80 | — | 51240 | 0 | 14 | 0 | 10248 | 0 | 0 | logfile |
✔ | 7RZV | 24779 | 2022-05-12 | 2021-08-27 | 2.11 | 2.24 | — | 2.0 | 0.005 | 0.35 | 0.0 | 0.03 | 14.68 | 0.00 | 2.348 | 5.44 | 0.00 | 0.0 | 100.0 | 0.0 | 3.06 | 0.79 | 0.80 | 2.21 | 2.0 | 0.004 | 0.36 | 0.0 | 0.03 | 15.90 | 0.00 | 2.235 | 5.24 | 0.34 | 0.0 | 100.0 | 0.0 | 5.91 | 0.88 | 0.83 | 0.82 | 1.88 | 2562 | 339 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oHF | 12901 | 2022-05-16 | 2021-05-10 | 3.0 | 3.29 | 3.12 | 3.4 | 0.008 | 0.89 | 0.0 | 0.05 | 9.77 | 0.01 | 2.144 | 2.67 | 0.00 | 0.6 | 99.4 | 0.0 | -7.39 | 0.64 | 0.80 | 4.20 | 3.4 | 0.002 | 0.60 | 0.0 | 0.04 | 15.45 | 0.00 | 2.127 | 8.32 | 0.12 | 0.0 | 100.0 | 0.0 | -0.18 | 1.61 | 0.63 | 0.82 | 2.79 | 33576 | 4056 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LHW | 0901 | 2022-05-13 | 2019-12-10 | 4.84 | 5.29 | — | 4.6 | 0.008 | 1.37 | 1.0 | 0.05 | 5.28 | 0.00 | 1.530 | 14.43 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.64 | 0.56 | — | 4.6 | 0.008 | 1.29 | 0.0 | 0.04 | 6.56 | 0.00 | 2.037 | 44.10 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.20 | 0.83 | 0.64 | — | 7644 | 0 | 3 | 0 | 1541 | 0 | 0 | logfile |
✔ | 6TUQ | 10594 | 2022-05-14 | 2020-01-08 | 3.9 | 4.52 | — | 4.0 | 0.009 | 1.01 | 0.0 | 0.05 | 11.22 | 0.00 | 2.191 | 8.45 | 3.12 | 0.0 | 100.0 | 0.0 | -6.69 | 0.68 | 0.88 | 0.54 | 4.0 | 0.002 | 0.69 | 0.0 | 0.04 | 12.40 | 0.00 | 2.309 | 10.56 | 0.19 | 0.0 | 100.0 | 0.0 | -0.42 | 1.66 | 0.69 | 0.88 | 0.80 | 16100 | 2300 | 50 | 0 | 0 | 0 | 0 | logfile |
✔ | 6X64 | 22069 | 2022-05-14 | 2020-05-27 | 3.7 | 4.01 | — | 3.7 | 0.008 | 1.34 | 0.0 | 0.05 | 9.32 | 0.01 | 2.584 | 0.78 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.68 | 0.84 | — | 3.7 | 0.009 | 1.23 | 0.0 | 0.05 | 5.42 | 0.00 | 2.111 | 10.24 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.35 | 0.69 | 0.86 | — | 15840 | 0 | 36 | 0 | 3168 | 0 | 0 | logfile |
✔ | 7RZQ | 24774 | 2022-05-12 | 2021-08-27 | 2.09 | 2.26 | — | 2.7 | 0.006 | 0.40 | 0.0 | 0.03 | 14.23 | 0.00 | 2.339 | 4.69 | 0.00 | 1.9 | 98.1 | 0.0 | 2.15 | 0.78 | 0.79 | 1.56 | 2.0 | 0.003 | 0.30 | 0.0 | 0.03 | 15.08 | 0.00 | 2.337 | 5.30 | 0.36 | 0.0 | 100.0 | 0.0 | 5.90 | 0.30 | 0.81 | 0.82 | 1.87 | 2421 | 322 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WL1 | 21815 | 2022-05-13 | 2020-04-17 | 4.0 | 4.02 | — | 4.0 | 0.007 | 0.81 | 0.0 | 0.05 | 7.85 | 0.00 | 2.413 | 3.17 | 0.00 | 0.0 | 100.0 | 0.0 | -1.08 | 0.71 | 0.85 | — | 4.0 | 0.004 | 0.51 | 0.0 | 0.04 | 16.18 | 0.00 | 2.242 | 6.18 | 1.33 | 0.0 | 100.0 | 0.0 | 6.14 | 0.73 | 0.72 | 0.86 | — | 14612 | 1872 | 52 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LHV | 0900 | 2022-05-13 | 2019-12-10 | 4.59 | 4.86 | — | 4.4 | 0.010 | 1.38 | 0.0 | 0.05 | 5.37 | 0.00 | 1.654 | 9.63 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.70 | 0.59 | — | 4.4 | 0.009 | 1.36 | 0.0 | 0.05 | 6.54 | 0.00 | 2.055 | 51.70 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.58 | 0.84 | 0.81 | — | 8456 | 0 | 3 | 0 | 1707 | 0 | 0 | logfile |
✔ | 6oDJ | 20021 | 2022-05-15 | 2019-03-26 | 3.5 | 3.75 | — | 3.7 | 0.009 | 1.50 | 0.0 | 0.07 | 11.32 | 0.01 | 2.438 | 2.03 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.81 | 0.81 | — | 3.7 | 0.012 | 1.73 | 0.0 | 0.06 | 7.95 | 0.00 | 2.092 | 10.66 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.60 | 0.82 | 0.83 | — | 25415 | 0 | 17 | 0 | 5083 | 0 | 0 | logfile |
✔ | 6WL7 | 21816 | 2022-05-16 | 2020-04-18 | 3.8 | 4.18 | — | 3.9 | 0.006 | 0.58 | 0.0 | 0.04 | 14.93 | 0.00 | 2.204 | 8.50 | 0.00 | 1.2 | 98.8 | 0.0 | 3.28 | 0.79 | 0.87 | 2.36 | 3.9 | 0.005 | 0.98 | 0.0 | 0.04 | 17.43 | 0.00 | 2.093 | 15.88 | 2.00 | 0.0 | 100.0 | 0.0 | 4.88 | 1.01 | 0.79 | 0.86 | 1.96 | 34350 | 4350 | 150 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UET | 20756 | 2022-05-12 | 2019-09-23 | 4.1 | 4.91 | — | 5.1 | 0.010 | 1.58 | 0.0 | 0.07 | 17.24 | 0.02 | 1.977 | 4.64 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.62 | 0.73 | — | 5.0 | 0.007 | 0.97 | 0.0 | 0.05 | 22.75 | 0.01 | 1.773 | 50.21 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.77 | 0.66 | 0.81 | — | 3869 | 0 | 1 | 119 | 1 | 0 | 1291 | logfile |
✔ | 6UES | 20755 | 2022-05-12 | 2019-09-23 | 3.7 | 3.94 | — | 3.2 | 0.002 | 0.48 | 0.0 | 0.02 | 17.15 | 0.00 | 2.100 | 7.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.87 | 0.76 | — | 3.3 | 0.007 | 0.87 | 0.0 | 0.04 | 21.10 | 0.01 | 1.792 | 36.17 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.34 | 0.88 | 0.83 | — | 3842 | 0 | 1 | 119 | 0 | 0 | 1291 | logfile |
✔ | 6WL9 | 21818 | 2022-05-15 | 2020-04-18 | 4.2 | 4.68 | — | 4.4 | 0.006 | 0.53 | 0.0 | 0.04 | 13.18 | 0.00 | 2.052 | 24.33 | 0.00 | 1.9 | 98.1 | 0.0 | 1.21 | 0.74 | 0.87 | — | 4.4 | 0.004 | 0.88 | 0.0 | 0.05 | 13.49 | 0.00 | 2.197 | 19.25 | 0.09 | 0.2 | 99.8 | 0.0 | 2.25 | 1.51 | 0.73 | 0.86 | — | 23400 | 3016 | 104 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WKY | 21813 | 2022-05-13 | 2020-04-17 | 4.2 | 4.29 | — | 4.1 | 0.006 | 0.74 | 0.0 | 0.05 | 16.88 | 0.00 | 2.366 | 8.91 | 0.00 | 0.6 | 99.4 | 0.0 | -5.20 | 0.76 | 0.88 | — | 4.1 | 0.004 | 0.94 | 0.0 | 0.05 | 15.75 | 0.00 | 2.311 | 20.60 | 0.00 | 0.2 | 99.8 | 0.0 | -1.99 | 1.44 | 0.75 | 0.86 | — | 9140 | 1160 | 40 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oVH | 20212 | 2022-05-13 | 2019-05-07 | 2.6 | 2.81 | 2.71 | 2.8 | 0.014 | 1.10 | 0.0 | 0.04 | 17.48 | 0.01 | 1.203 | 1.15 | 4.55 | 1.0 | 99.0 | 0.0 | -6.34 | 0.75 | 0.87 | 4.63 | 2.8 | 0.002 | 0.72 | 0.0 | 0.04 | 18.70 | 0.00 | 2.068 | 2.87 | 0.19 | 0.2 | 99.8 | 0.0 | 3.27 | 0.99 | 0.77 | 0.88 | 3.42 | 10895 | 1272 | 36 | 0 | 68 | 171 | 0 | logfile |
✔ | 6VSC | 21376 | 2022-05-13 | 2020-02-11 | 2.6 | 2.97 | — | 2.9 | 0.014 | 2.41 | 75.0 | 0.15 | 18.44 | 0.01 | 2.153 | 16.56 | 7.73 | 3.9 | 96.1 | 0.0 | -1.96 | 0.91 | 0.90 | 3.76 | 2.9 | 0.004 | 0.75 | 0.0 | 0.05 | 18.24 | 0.01 | 2.083 | 17.19 | 3.77 | 0.2 | 99.7 | 0.1 | 0.63 | 1.23 | 0.86 | 0.84 | 3.28 | 9670 | 1175 | 5 | 0 | 0 | 0 | 0 | logfile |