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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8PV7 | 17956 | 2024-03-03 | 2023-07-17 | 2.12 | 2.36 | — | 2.2 | 0.007 | 0.79 | 0.0 | 0.04 | 21.72 | 0.02 | 2.127 | 2.55 | 0.91 | 1.3 | 98.7 | 0.0 | 0.70 | 0.89 | 0.88 | 5.14 | 2.2 | 0.005 | 0.67 | 0.0 | 0.04 | 21.62 | 0.01 | 1.949 | 5.21 | 1.29 | 1.3 | 98.7 | 0.0 | 1.78 | 0.20 | 0.90 | 0.90 | 4.91 | 157262 | 10514 | 68 | 3435 | 10 | 3 | 0 | logfile |
✔ | 8PV1 | 17950 | 2024-03-03 | 2023-07-17 | 2.56 | 2.49 | — | 2.5 | 0.006 | 0.73 | 1.0 | 0.04 | 21.03 | 0.02 | 2.081 | 3.09 | 0.02 | 1.6 | 98.4 | 0.0 | 0.35 | 0.90 | 0.88 | 4.42 | 2.5 | 0.003 | 0.65 | 0.0 | 0.04 | 21.53 | 0.01 | 1.908 | 6.12 | 1.62 | 1.5 | 98.5 | 0.0 | 1.47 | 1.08 | 0.91 | 0.90 | 4.10 | 157250 | 10512 | 68 | 3435 | 10 | 3 | 0 | logfile |
✔ | 7ABZ | 11710 | 2024-03-03 | 2020-09-09 | 3.21 | 3.34 | 3.36 | 2.9 | 0.004 | 0.73 | 18.0 | 0.05 | 23.36 | 0.02 | 1.049 | 16.14 | 0.64 | 6.5 | 93.3 | 0.3 | -0.66 | 0.81 | 0.78 | 1.54 | 2.5 | 0.005 | 0.72 | 1.0 | 0.04 | 23.78 | 0.01 | 1.804 | 18.85 | 4.27 | 9.3 | 90.6 | 0.0 | -1.37 | 1.65 | 0.85 | 0.85 | 1.62 | 157227 | 6311 | 66 | 5017 | 194 | 0 | 0 | logfile |
✔ | 7oHX | 12912 | 2024-03-03 | 2021-05-11 | 3.3 | 4.37 | 3.24 | 2.9 | 0.005 | 0.49 | 0.0 | 0.03 | 21.71 | 0.00 | 1.859 | 5.26 | 0.81 | 3.7 | 96.3 | 0.0 | 1.38 | 0.79 | 0.67 | 0.81 | 3.0 | 0.007 | 0.65 | 0.0 | 0.04 | 22.34 | 0.00 | 1.792 | 15.26 | 2.44 | 6.7 | 93.3 | 0.1 | -0.47 | 1.41 | 0.83 | 0.76 | 1.44 | 157028 | 6076 | 39 | 1774 | 2 | 0 | 70039 | logfile |
✔ | 3J9Z | 6315 | 2024-03-03 | 2015-03-27 | 3.6 | 3.80 | — | 3.7 | 0.017 | 2.31 | 171.0 | 0.16 | 24.24 | 0.04 | 2.267 | 1.72 | 3.84 | 7.6 | 89.1 | 3.3 | -2.82 | 0.56 | 0.39 | 0.14 | 3.7 | 0.004 | 0.74 | 1.0 | 0.04 | 23.55 | 0.01 | 1.991 | 17.75 | 3.71 | 9.1 | 90.4 | 0.5 | -2.04 | 2.18 | 0.84 | 0.83 | 0.85 | 156714 | 7125 | 59 | 4717 | 1 | 0 | 0 | logfile |
✔ | 6Q97 | 4476 | 2024-03-03 | 2018-12-17 | 3.9 | 3.69 | — | 20.0 | 0.011 | 1.20 | 0.0 | 0.16 | 24.87 | 0.02 | 1.320 | 6.99 | 0.38 | 10.1 | 89.8 | 0.1 | -5.34 | 0.15 | 0.01 | 0.22 | 3.6 | 0.005 | 0.92 | 1.0 | 0.05 | 25.72 | 0.01 | 0.951 | 21.35 | 3.55 | 10.5 | 89.5 | 0.0 | -3.27 | 2.51 | 0.27 | 0.22 | 0.31 | 156609 | 6124 | 72 | 5051 | 441 | 2 | 0 | logfile |
✔ | 3JCT | 6615 | 2024-03-03 | 2016-03-09 | 3.08 | 3.17 | — | 3.2 | 0.007 | 1.09 | 7.0 | 0.09 | 24.06 | 0.00 | 1.197 | 3.64 | 8.22 | 7.2 | 90.3 | 2.5 | -3.22 | 0.59 | 0.77 | 2.31 | 3.1 | 0.003 | 0.68 | 0.0 | 0.04 | 23.18 | 0.00 | 1.957 | 9.71 | 6.40 | 6.8 | 92.5 | 0.7 | -0.90 | 1.49 | 0.70 | 0.85 | 1.87 | 156562 | 10503 | 64 | 3402 | 8 | 0 | 0 | logfile |
✔ | 8i9Y | 35288 | 2024-03-03 | 2023-02-07 | 3.1 | 3.04 | 3.11 | 3.0 | 0.004 | 0.78 | 5.0 | 0.05 | 21.13 | 0.01 | 1.939 | 11.82 | 1.81 | 5.3 | 94.5 | 0.3 | -0.29 | 0.72 | 0.76 | 2.36 | 3.0 | 0.004 | 0.63 | 0.0 | 0.04 | 21.34 | 0.01 | 1.975 | 10.18 | 2.72 | 4.4 | 95.5 | 0.1 | 0.54 | 0.66 | 0.80 | 0.82 | 2.38 | 156553 | 12049 | 62 | 2865 | 3 | 0 | 0 | logfile |
✔ | 7YFE | 33787 | 2024-03-03 | 2022-07-08 | 3.4 | 3.99 | 3.52 | 3.9 | 0.003 | 0.66 | 1.0 | 0.05 | 13.64 | 0.00 | 2.039 | 7.79 | 0.95 | 3.9 | 96.1 | 0.0 | -0.18 | 0.39 | 0.80 | 1.74 | 3.9 | 0.003 | 0.70 | 0.0 | 0.04 | 16.42 | 0.00 | 2.054 | 11.14 | 4.11 | 4.5 | 95.5 | 0.0 | -0.14 | 2.08 | 0.35 | 0.84 | 1.84 | 156282 | 19807 | 32 | 17 | 7 | 0 | 0 | logfile |
✔ | 6NUT | 0522 | 2024-03-03 | 2019-02-01 | 3.1 | 3.21 | 3.12 | 3.2 | 0.016 | 1.35 | 0.0 | 0.08 | 12.09 | 0.01 | 1.275 | 3.78 | 0.32 | 0.8 | 99.2 | 0.0 | -0.03 | 0.51 | 0.63 | 1.07 | 3.2 | 0.005 | 0.70 | 3.0 | 0.04 | 17.18 | 0.00 | 1.723 | 8.31 | 1.99 | 1.6 | 98.4 | 0.0 | 1.01 | 2.59 | 0.62 | 0.85 | 2.73 | 156150 | 18950 | 100 | 300 | 0 | 0 | 0 | logfile |
✔ | 7Aoi | 11845 | 2024-03-03 | 2020-10-14 | 3.5 | 3.35 | 3.41 | 3.3 | 0.003 | 0.48 | 0.0 | 0.04 | 12.47 | 0.00 | 1.900 | 6.20 | 0.62 | 3.4 | 96.6 | 0.0 | 1.79 | 0.78 | 0.82 | 2.93 | 3.3 | 0.004 | 0.64 | 2.0 | 0.04 | 16.38 | 0.00 | 1.894 | 11.58 | 3.15 | 3.6 | 96.4 | 0.0 | 1.00 | 1.28 | 0.81 | 0.84 | 2.74 | 156070 | 17411 | 90 | 758 | 10 | 0 | 0 | logfile |
✘ | 8iDY | 35371 | 2024-03-28 | 2023-02-14 | 3.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 155910 | 8949 | 56 | 3918 | 2 | 0 | 0 | logfile |
✔ | 6SSK | 10296 | 2024-03-03 | 2019-09-08 | 3.18 | 3.64 | — | 3.6 | 0.008 | 0.88 | 10.0 | 0.06 | 14.40 | 0.01 | 1.561 | 4.60 | 0.18 | 3.5 | 96.2 | 0.3 | -4.85 | 0.57 | 0.57 | 0.07 | 3.6 | 0.003 | 0.69 | 0.0 | 0.04 | 16.99 | 0.00 | 2.108 | 8.95 | 2.02 | 2.6 | 97.4 | 0.0 | -0.22 | 1.39 | 0.74 | 0.86 | 1.58 | 155900 | 19870 | 90 | 0 | 0 | 0 | 0 | logfile |
✔ | 8PV2 | 17951 | 2024-03-03 | 2023-07-17 | 2.63 | 2.67 | — | 2.6 | 0.007 | 0.78 | 0.0 | 0.04 | 20.89 | 0.02 | 2.067 | 3.16 | 0.02 | 1.8 | 98.2 | 0.0 | 0.24 | 0.90 | 0.89 | 4.32 | 2.6 | 0.002 | 0.64 | 0.0 | 0.04 | 21.24 | 0.01 | 1.912 | 6.92 | 0.83 | 1.8 | 98.2 | 0.0 | 1.41 | 2.11 | 0.91 | 0.90 | 3.84 | 155881 | 10783 | 66 | 3328 | 10 | 3 | 0 | logfile |
✔ | 8V9L | 43076 | 2024-03-03 | 2023-12-08 | 3.0 | 3.32 | 3.04 | 3.2 | 0.005 | 0.62 | 0.0 | 0.04 | 22.85 | 0.01 | 2.110 | 6.59 | 0.00 | 4.6 | 95.3 | 0.1 | -0.83 | 0.78 | 0.88 | 3.22 | 3.2 | 0.006 | 0.66 | 1.0 | 0.04 | 22.89 | 0.01 | 2.085 | 6.79 | 2.47 | 4.8 | 95.2 | 0.0 | -0.34 | 0.25 | 0.78 | 0.89 | 2.76 | 155647 | 6849 | 62 | 4781 | 2 | 0 | 0 | logfile |
✔ | 8PV3 | 17952 | 2024-03-03 | 2023-07-17 | 2.8 | 2.83 | — | 2.8 | 0.006 | 0.74 | 0.0 | 0.04 | 20.94 | 0.02 | 2.086 | 3.37 | 0.02 | 1.5 | 98.5 | 0.0 | 0.23 | 0.90 | 0.88 | 4.15 | 2.8 | 0.007 | 0.73 | 0.0 | 0.04 | 21.21 | 0.01 | 1.857 | 6.20 | 1.17 | 2.0 | 98.0 | 0.0 | 1.27 | 0.31 | 0.92 | 0.90 | 3.95 | 155443 | 10501 | 68 | 3355 | 10 | 3 | 0 | logfile |
✔ | 5WDT | 8813 | 2024-03-03 | 2017-07-06 | 3.0 | 3.20 | 3.19 | 3.2 | 0.008 | 1.13 | 2.0 | 0.10 | 24.24 | 0.02 | 1.527 | 4.72 | 3.29 | 9.7 | 88.1 | 2.3 | -4.08 | 0.77 | 0.80 | 2.46 | 3.1 | 0.007 | 0.82 | 3.0 | 0.04 | 23.70 | 0.01 | 1.741 | 10.82 | 5.11 | 8.6 | 90.8 | 0.5 | -1.45 | 1.26 | 0.84 | 0.85 | 2.33 | 155275 | 6324 | 125 | 4802 | 1910 | 920 | 0 | logfile |
✔ | 6Q9A | 4478 | 2024-03-02 | 2018-12-17 | 3.7 | 3.75 | — | 3.7 | 0.009 | 1.12 | 0.0 | 0.17 | 24.21 | 0.02 | 1.280 | 5.71 | 0.79 | 9.1 | 90.9 | 0.1 | -4.18 | 0.84 | 0.83 | 1.58 | 3.7 | 0.004 | 0.69 | 2.0 | 0.04 | 23.73 | 0.01 | 1.105 | 13.26 | 5.19 | 6.9 | 93.1 | 0.0 | -1.53 | 2.33 | 0.84 | 0.82 | 1.25 | 155169 | 6092 | 70 | 4996 | 439 | 2 | 0 | logfile |
✔ | 5WFS | 8829 | 2024-03-02 | 2017-07-12 | 3.0 | 3.09 | 3.13 | 3.0 | 0.008 | 1.16 | 2.0 | 0.10 | 24.59 | 0.02 | 1.324 | 4.18 | 3.10 | 9.3 | 88.2 | 2.4 | -4.11 | 0.73 | 0.77 | 2.42 | 3.0 | 0.006 | 0.84 | 1.0 | 0.04 | 24.01 | 0.01 | 1.031 | 12.54 | 4.92 | 8.9 | 90.5 | 0.6 | -1.93 | 1.52 | 0.84 | 0.85 | 2.39 | 155100 | 6324 | 114 | 4802 | 1479 | 1175 | 0 | logfile |
✔ | 5WE4 | 8814 | 2024-03-02 | 2017-07-07 | 3.1 | 3.04 | 3.02 | 3.0 | 0.008 | 1.14 | 3.0 | 0.10 | 24.21 | 0.02 | 1.575 | 3.75 | 3.52 | 9.8 | 87.9 | 2.3 | -4.03 | 0.78 | 0.81 | 2.62 | 3.0 | 0.005 | 0.78 | 0.0 | 0.04 | 23.77 | 0.01 | 1.021 | 11.61 | 5.67 | 8.3 | 91.2 | 0.5 | -1.85 | 3.97 | 0.84 | 0.83 | 2.36 | 155067 | 6324 | 117 | 4802 | 1620 | 996 | 0 | logfile |