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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5TAL | 8378 | 2024-04-09 | 2016-09-10 | 4.3 | 4.43 | 4.52 | 4.3 | 0.005 | 0.92 | 0.0 | 0.05 | 10.26 | 0.01 | 1.373 | 5.27 | 0.62 | 10.5 | 89.3 | 0.1 | -5.03 | 0.79 | 0.78 | — | 4.2 | 0.004 | 0.75 | 0.0 | 0.04 | 12.16 | 0.00 | 2.033 | 15.16 | 0.01 | 11.7 | 88.1 | 0.1 | -1.61 | 0.84 | 0.80 | 0.80 | — | 121456 | 13500 | 12 | 0 | 3720 | 0 | 0 | logfile |
✘ | 5TAT | 8384 | 2024-04-09 | 2016-09-10 | 4.8 | 5.01 | 5.79 | 4.8 | 0.004 | 0.87 | 0.0 | 0.05 | 9.86 | 0.01 | 1.373 | 4.75 | 0.35 | 9.4 | 90.5 | 0.1 | -4.89 | 0.78 | 0.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 121452 | 13500 | 12 | 0 | 3716 | 0 | 0 | logfile |
✘ | 5TAV | 8386 | 2024-04-09 | 2016-09-10 | 4.8 | 4.96 | 5.58 | 4.7 | 0.004 | 0.89 | 4.0 | 0.05 | 9.84 | 0.01 | 1.373 | 4.75 | 0.39 | 9.7 | 90.1 | 0.2 | -4.80 | 0.77 | 0.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 121452 | 13500 | 12 | 0 | 3716 | 0 | 0 | logfile |
✔ | 5TAP | 8381 | 2024-04-09 | 2016-09-10 | 4.4 | 4.55 | 4.56 | 4.4 | 0.004 | 0.88 | 4.0 | 0.05 | 10.08 | 0.01 | 1.373 | 4.46 | 0.54 | 9.9 | 89.9 | 0.2 | -4.98 | 0.78 | 0.77 | — | 4.4 | 0.004 | 0.76 | 0.0 | 0.04 | 12.20 | 0.00 | 1.949 | 15.04 | 0.04 | 11.8 | 88.1 | 0.1 | -1.76 | 0.86 | 0.79 | 0.80 | — | 121452 | 13500 | 12 | 0 | 3716 | 0 | 0 | logfile |
✘ | 5TAY | 8389 | 2024-04-09 | 2016-09-10 | 4.6 | 4.71 | 4.77 | 4.5 | 0.004 | 0.86 | 4.0 | 0.05 | 9.86 | 0.01 | 1.374 | 4.89 | 0.46 | 10.4 | 89.4 | 0.2 | -4.90 | 0.75 | 0.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 121276 | 13500 | 12 | 0 | 3712 | 0 | 0 | logfile |
✔ | 5TAW | 8387 | 2024-04-09 | 2016-09-10 | 4.4 | 4.49 | 4.56 | 4.2 | 0.004 | 0.86 | 0.0 | 0.05 | 9.82 | 0.01 | 1.373 | 5.05 | 0.39 | 10.3 | 89.5 | 0.2 | -4.87 | 0.79 | 0.75 | — | 4.2 | 0.004 | 0.74 | 0.0 | 0.04 | 11.83 | 0.00 | 2.067 | 16.23 | 0.00 | 12.0 | 87.8 | 0.2 | -1.82 | 1.98 | 0.81 | 0.79 | — | 121276 | 13500 | 12 | 0 | 3712 | 0 | 0 | logfile |
✔ | 5TAZ | 8390 | 2024-04-09 | 2016-09-10 | 4.3 | 4.46 | 4.86 | 4.3 | 0.004 | 0.86 | 4.0 | 0.05 | 9.92 | 0.01 | 1.373 | 4.79 | 0.58 | 10.2 | 89.6 | 0.2 | -5.04 | 0.74 | 0.73 | — | 4.3 | 0.004 | 0.78 | 0.0 | 0.04 | 11.92 | 0.00 | 2.056 | 17.02 | 0.00 | 12.8 | 87.1 | 0.1 | -1.74 | 0.87 | 0.75 | 0.77 | — | 121276 | 13500 | 12 | 0 | 3712 | 0 | 0 | logfile |
✘ | 6PV6 | 20486 | 2024-04-09 | 2019-07-19 | 4.5 | 5.79 | — | 3.8 | 0.006 | 1.04 | 0.0 | 0.05 | 10.65 | 0.01 | 1.373 | 9.47 | 0.31 | 11.0 | 88.9 | 0.1 | -4.72 | 0.60 | 0.39 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✘ | 7JMF | 22392 | 2024-04-08 | 2020-07-31 | 4.5 | 5.06 | — | 4.7 | 0.005 | 0.98 | 0.0 | 0.05 | 10.23 | 0.01 | 1.373 | 8.08 | 0.36 | 11.2 | 88.6 | 0.2 | -4.91 | 0.54 | 0.27 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✘ | 7JMG | 22393 | 2024-04-08 | 2020-07-31 | 4.5 | 7.15 | — | 4.3 | 0.005 | 0.93 | 0.0 | 0.05 | 9.82 | 0.01 | 1.373 | 7.38 | 0.27 | 10.3 | 89.6 | 0.1 | -4.77 | 0.57 | 0.34 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✔ | 5T15 | 8342 | 2024-04-09 | 2016-08-17 | 3.6 | 3.80 | 3.88 | 3.7 | 0.007 | 1.01 | 0.0 | 0.05 | 10.37 | 0.01 | 1.373 | 4.08 | 0.45 | 11.5 | 88.2 | 0.3 | -5.71 | 0.73 | 0.78 | 2.03 | 3.7 | 0.003 | 0.73 | 0.0 | 0.04 | 14.01 | 0.00 | 2.120 | 8.83 | 2.06 | 9.8 | 90.1 | 0.2 | -1.69 | 1.46 | 0.73 | 0.79 | 1.29 | 120796 | 13508 | 12 | 0 | 3608 | 0 | 0 | logfile |
✔ | 7JMi | 22395 | 2024-04-08 | 2020-07-31 | 4.5 | 6.62 | — | 4.3 | 0.004 | 0.92 | 0.0 | 0.05 | 10.07 | 0.01 | 1.373 | 7.47 | 0.31 | 10.5 | 89.3 | 0.2 | -4.79 | 0.58 | 0.34 | — | 4.2 | 0.004 | 0.91 | 0.0 | 0.05 | 11.41 | 0.01 | 1.586 | 21.66 | 0.00 | 11.8 | 88.0 | 0.2 | -3.52 | 0.81 | 0.81 | 0.69 | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✘ | 7JMH | 22394 | 2024-04-08 | 2020-07-31 | 4.5 | 5.68 | — | 4.4 | 0.005 | 1.02 | 0.0 | 0.05 | 10.48 | 0.01 | 1.373 | 9.43 | 0.46 | 11.7 | 88.2 | 0.1 | -4.60 | 0.56 | 0.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✔ | 5T9N | 8373 | 2024-04-08 | 2016-09-09 | 3.8 | 4.02 | 4.06 | 3.8 | 0.005 | 0.89 | 0.0 | 0.05 | 9.92 | 0.01 | 1.373 | 3.76 | 0.50 | 10.3 | 89.6 | 0.2 | -5.47 | 0.76 | 0.78 | 1.96 | 3.8 | 0.005 | 0.78 | 0.0 | 0.04 | 14.14 | 0.00 | 2.092 | 12.46 | 2.78 | 11.8 | 88.0 | 0.2 | -1.73 | 0.82 | 0.77 | 0.81 | 1.39 | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✔ | 5T9S | 8375 | 2024-04-08 | 2016-09-09 | 4.2 | 4.32 | 4.62 | 4.2 | 0.004 | 0.88 | 0.0 | 0.05 | 9.86 | 0.01 | 1.373 | 3.99 | 0.50 | 10.3 | 89.5 | 0.1 | -5.16 | 0.72 | 0.73 | — | 4.2 | 0.004 | 0.76 | 0.0 | 0.04 | 12.36 | 0.00 | 2.073 | 14.19 | 0.00 | 12.4 | 87.5 | 0.1 | -2.07 | 0.90 | 0.73 | 0.76 | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✔ | 5T9M | 8372 | 2024-04-08 | 2016-09-09 | 4.0 | 4.11 | 4.14 | 4.0 | 0.004 | 0.89 | 0.0 | 0.05 | 9.89 | 0.01 | 1.373 | 3.64 | 0.49 | 10.7 | 89.2 | 0.1 | -5.48 | 0.71 | 0.76 | — | 4.0 | 0.003 | 0.75 | 0.0 | 0.04 | 14.34 | 0.00 | 2.121 | 11.87 | 3.14 | 10.9 | 88.9 | 0.1 | -1.74 | 0.84 | 0.72 | 0.78 | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✘ | 7JMJ | 22396 | 2024-04-08 | 2020-07-31 | 4.5 | 5.51 | — | 4.3 | 0.007 | 1.08 | 0.0 | 0.05 | 10.58 | 0.01 | 1.373 | 9.90 | 0.62 | 11.3 | 88.5 | 0.3 | -4.67 | 0.56 | 0.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✔ | 7K0T | 22616 | 2024-04-07 | 2020-09-05 | 4.3 | 4.52 | 4.29 | 4.2 | 0.003 | 0.65 | 1.0 | 0.04 | 13.88 | 0.00 | 1.909 | 7.65 | 0.63 | 7.5 | 92.4 | 0.2 | -0.19 | 0.84 | 0.76 | — | 4.2 | 0.036 | 2.69 | 57.0 | 0.11 | 15.92 | 0.02 | 0.366 | 109.75 | 0.00 | 43.4 | 55.0 | 1.6 | -7.46 | 2.20 | 0.86 | 0.83 | — | 115905 | 12820 | 8 | 0 | 3608 | 0 | 0 | logfile |
✔ | 7K0S | 22615 | 2024-04-07 | 2020-09-05 | 4.5 | 4.73 | 4.68 | 4.6 | 0.003 | 0.64 | 2.0 | 0.04 | 14.04 | 0.00 | 2.069 | 9.69 | 0.95 | 7.8 | 92.0 | 0.2 | -0.12 | 0.80 | 0.73 | — | 4.6 | 0.043 | 3.17 | 236.0 | 0.13 | 17.13 | 0.02 | 1.379 | 136.31 | 0.01 | 44.3 | 52.3 | 3.4 | -7.53 | 2.27 | 0.84 | 0.82 | — | 115935 | 12896 | 8 | 0 | 3557 | 0 | 0 | logfile |
✔ | 7UMZ | 26610 | 2024-04-06 | 2022-04-08 | 3.09 | 3.37 | 3.21 | 3.3 | 0.004 | 0.87 | 0.0 | 0.04 | 17.67 | 0.01 | 2.198 | 7.00 | 2.38 | 6.1 | 93.3 | 0.6 | -1.01 | 0.68 | 0.70 | 1.58 | 3.3 | 0.060 | 2.96 | 149.0 | 0.19 | 20.93 | 0.02 | 0.739 | 52.46 | 23.20 | 26.6 | 70.8 | 2.6 | -6.91 | 1.64 | 0.75 | 0.86 | 2.22 | 111437 | 12516 | 12 | 0 | 3221 | 8 | 0 | logfile |