Table showing results for July 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	7D1T	30547	2022-07-02	2020-09-15	1.95	1.88	1.89	1.9	0.020	1.91	31.0	0.10	18.53	0.02	1.200	3.45	2.40	1.9	97.9	0.2	-0.93	0.77	0.85	6.98	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	52994	5312	108	0	196	2432	0	logfile
✘	7D1U	30548	2022-07-08	2020-09-15	2.08	1.94	2.04	2.0	0.018	1.83	27.0	0.10	18.50	0.02	1.202	4.10	3.09	2.3	97.5	0.2	-1.36	0.74	0.87	6.76	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	52655	5312	106	0	196	2121	0	logfile
✘	7LoK	23465	2022-07-04	2021-02-10	3.9	4.11	—	4.0	0.006	1.12	4.0	0.07	13.46	0.01	1.259	14.91	0.39	11.9	88.0	0.2	-5.60	0.76	0.77	2.26	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14498	1999	19	0	32	0	0	logfile
✘	7KRo	23008	2022-07-05	2020-11-20	3.6	4.10	—	4.0	0.008	0.73	0.0	0.05	14.56	0.00	1.225	9.00	9.40	6.9	92.8	0.3	-1.73	0.79	0.81	1.69	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	21988	2553	11	80	19	0	0	logfile
✘	6ZMW	11302	2022-07-04	2020-07-04	3.7	3.79	3.57	3.7	0.007	1.19	0.0	0.06	16.15	0.01	1.218	7.28	2.46	6.4	93.3	0.2	-2.63	0.70	0.65	1.27	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	118155	11116	62	1822	91	0	0	logfile
✘	7E2X	30971	2022-07-03	2021-02-07	3.0	3.88	—	3.9	0.008	0.71	0.0	0.05	11.19	0.00	1.184	4.18	0.00	1.5	98.5	0.0	2.48	0.44	0.60	1.55	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7226	870	4	0	14	9	0	logfile
✘	7JRo	22447	2022-07-03	2020-08-12	3.8	3.86	3.82	3.9	0.009	1.03	0.0	0.05	15.90	0.01	1.282	14.56	0.08	9.2	90.8	0.1	-0.46	0.61	0.85	2.32	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	12747	1492	17	0	26	0	0	logfile
✘	7M4R	23665	2022-07-03	2021-03-22	3.65	4.49	—	4.2	0.007	0.83	0.0	0.05	14.71	0.01	2.259	9.04	0.00	14.2	85.6	0.2	-2.94	0.74	0.66	1.90	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	5092	639	3	0	0	0	0	logfile
✘	7E2Z	30973	2022-07-03	2021-02-07	3.1	3.34	—	3.4	0.008	0.66	0.0	0.04	13.29	0.00	1.185	5.36	0.00	1.6	98.4	0.0	2.35	0.57	0.74	1.94	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6997	870	4	0	5	0	0	logfile
✘	7LWQ	23554	2022-07-04	2021-03-01	3.44	3.73	—	3.6	0.013	1.77	6.0	0.09	13.64	0.01	2.529	0.26	0.90	6.5	93.1	0.4	-1.31	0.72	0.71	2.56	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	19190	2425	6	0	23	0	0	logfile
✘	7LQY	23491	2022-07-05	2021-02-15	3.19	3.30	—	3.3	0.011	1.36	0.0	0.05	20.43	0.01	1.180	4.96	0.69	6.6	93.3	0.2	-5.23	0.74	0.81	2.82	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	22954	2636	8	0	38	0	0	logfile
✘	6VP9	21307	2022-07-03	2020-02-02	3.46	3.63	—	3.6	0.005	0.63	0.0	0.04	15.20	0.00	1.229	21.74	0.00	9.4	90.6	0.0	-3.63	0.77	0.86	1.78	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8610	1077	4	0	1	0	0	logfile
✘	7E32	30974	2022-07-03	2021-02-07	2.9	3.21	—	3.1	0.003	0.45	0.0	0.04	12.53	0.00	1.363	6.09	0.10	2.1	97.9	0.0	2.17	0.62	0.74	2.89	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8797	1117	5	0	2	0	0	logfile
✘	6XZA	10656	2022-07-07	2020-02-03	2.66	4.00	—	3.8	0.006	0.66	1.0	0.04	14.20	0.00	0.349	6.78	2.91	3.1	96.4	0.4	-1.96	0.72	0.68	2.40	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	143983	5732	54	4616	1	0	0	logfile
✘	6XZB	10657	2022-07-08	2020-02-03	2.54	3.99	—	3.8	0.006	0.62	1.0	0.04	14.32	0.01	0.178	7.13	2.93	3.1	96.4	0.4	-1.96	0.75	0.71	2.59	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	145650	5732	55	4692	1	0	0	logfile
✘	6XLM	22248	2022-07-05	2020-06-28	3.2	3.76	—	3.5	0.008	0.79	0.0	0.05	14.95	0.00	1.395	9.49	0.07	0.7	99.3	0.0	-2.52	0.82	0.84	2.16	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	28244	3485	11	40	5	0	0	logfile
✘	7AAP	11692	2022-07-03	2020-09-04	2.5	2.71	2.48	2.8	0.002	0.47	0.0	0.04	12.42	0.00	1.236	3.74	0.20	1.5	98.5	0.0	0.59	0.79	0.87	4.74	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9446	1120	9	21	7	0	0	logfile
✘	7CoY	30420	2022-07-03	2020-08-05	2.5	2.41	2.54	2.5	0.017	1.73	5.0	0.10	14.13	0.01	1.106	11.63	0.90	5.6	94.3	0.1	-3.23	0.57	0.80	3.51	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	57966	6096	66	0	279	84	0	logfile
✘	7BC7	12141	2022-07-03	2020-12-18	3.3	3.46	3.24	3.4	0.008	0.87	0.0	0.05	14.35	0.01	1.181	12.54	0.23	9.4	90.5	0.2	-1.48	0.58	0.84	2.41	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	4209	549	3	0	1	0	0	logfile
✘	7EB2	31049	2022-07-04	2021-03-08	3.5	3.43	—	3.4	0.007	0.74	0.0	0.05	11.69	0.00	1.256	7.85	0.00	3.6	96.4	0.0	-1.24	0.79	0.74	1.53	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18497	2337	8	0	2	0	0	logfile

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