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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7LH3 | 23335 | 2022-05-13 | 2021-01-21 | 4.3 | 4.87 | — | 4.6 | 0.001 | 0.40 | 0.0 | 0.04 | 7.88 | 0.00 | 2.258 | 4.81 | 1.06 | 1.8 | 98.2 | 0.0 | 2.29 | 0.61 | 0.73 | — | 4.6 | 0.003 | 0.65 | 0.0 | 0.04 | 10.89 | 0.00 | 2.261 | 11.45 | 0.00 | 4.2 | 95.8 | 0.0 | 1.60 | 1.12 | 0.63 | 0.82 | — | 10452 | 1360 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PGS | 13394 | 2022-05-14 | 2021-08-15 | 3.4 | 3.61 | 3.34 | 3.4 | 0.002 | 0.40 | 0.0 | 0.03 | 10.77 | 0.00 | 1.972 | 3.59 | 0.66 | 1.2 | 98.8 | 0.0 | -0.33 | 0.80 | 0.79 | 2.03 | 3.4 | 0.004 | 0.57 | 0.0 | 0.04 | 13.25 | 0.00 | 1.886 | 6.43 | 0.16 | 4.0 | 95.9 | 0.0 | 1.36 | 0.74 | 0.82 | 0.81 | 1.49 | 67202 | 4210 | 2 | 0 | 1 | 0 | 33807 | logfile |
✔ | 7oDS | 12846 | 2022-05-12 | 2021-04-30 | 3.1 | 3.32 | — | 3.1 | 0.002 | 0.40 | 0.0 | 0.03 | 11.15 | 0.02 | 2.009 | 5.15 | 0.51 | 1.2 | 98.8 | 0.0 | 0.91 | 0.78 | 0.76 | 2.42 | 3.1 | 0.006 | 0.77 | 1.0 | 0.04 | 14.75 | 0.01 | 1.478 | 11.86 | 0.36 | 3.3 | 96.7 | 0.0 | 0.33 | 1.69 | 0.79 | 0.79 | 2.24 | 108339 | 9371 | 67 | 1487 | 132 | 0 | 0 | logfile |
✔ | 7oo8 | 13007 | 2022-05-13 | 2021-05-26 | 3.7 | 2.99 | 3.39 | 3.0 | 0.003 | 0.40 | 0.0 | 0.04 | 9.89 | 0.00 | 2.286 | 6.45 | 0.00 | 1.9 | 98.1 | 0.0 | 2.79 | 0.65 | 0.79 | 2.44 | 3.0 | 0.003 | 0.48 | 0.0 | 0.04 | 14.96 | 0.00 | 2.291 | 10.06 | 0.27 | 1.2 | 98.8 | 0.0 | 2.49 | 0.46 | 0.65 | 0.79 | 2.25 | 13923 | 1827 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZQ | 24774 | 2022-05-12 | 2021-08-27 | 2.09 | 2.26 | — | 2.7 | 0.006 | 0.40 | 0.0 | 0.03 | 14.23 | 0.00 | 2.339 | 4.69 | 0.00 | 1.9 | 98.1 | 0.0 | 2.15 | 0.78 | 0.79 | 1.56 | 2.0 | 0.003 | 0.30 | 0.0 | 0.03 | 15.08 | 0.00 | 2.337 | 5.30 | 0.36 | 0.0 | 100.0 | 0.0 | 5.90 | 0.30 | 0.81 | 0.82 | 1.87 | 2421 | 322 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZR | 24775 | 2022-05-12 | 2021-08-27 | 2.27 | 2.24 | — | 2.0 | 0.007 | 0.40 | 0.0 | 0.04 | 14.34 | 0.00 | 2.436 | 3.23 | 0.00 | 1.9 | 98.1 | 0.0 | 2.50 | 0.79 | 0.80 | 3.37 | 2.0 | 0.003 | 0.35 | 0.0 | 0.03 | 15.28 | 0.00 | 2.325 | 4.84 | 0.35 | 0.0 | 100.0 | 0.0 | 6.56 | 0.32 | 0.81 | 0.82 | 3.42 | 2448 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QNB | 14073 | 2022-05-13 | 2021-12-20 | 3.1 | 3.62 | — | 3.3 | 0.002 | 0.40 | 0.0 | 0.04 | 9.33 | 0.00 | 2.241 | 5.57 | 0.56 | 1.7 | 98.3 | 0.0 | 1.87 | 0.75 | 0.84 | 3.27 | 3.3 | 0.003 | 0.65 | 0.0 | 0.04 | 12.91 | 0.00 | 2.134 | 8.56 | 0.38 | 2.4 | 97.6 | 0.0 | 1.24 | 2.14 | 0.78 | 0.89 | 3.66 | 14793 | 1767 | 15 | 0 | 24 | 0 | 0 | logfile |
✔ | 7MFG | 23816 | 2022-05-14 | 2021-04-09 | 3.87 | 4.47 | 3.92 | 4.0 | 0.002 | 0.40 | 0.0 | 0.04 | 9.39 | 0.00 | 1.993 | 5.51 | 0.22 | 4.2 | 95.8 | 0.0 | 0.42 | 0.86 | 0.84 | 2.35 | 4.1 | 0.003 | 0.68 | 0.0 | 0.04 | 12.94 | 0.00 | 2.046 | 11.10 | 0.27 | 5.4 | 94.6 | 0.0 | -0.23 | 1.25 | 0.87 | 0.86 | 1.97 | 17013 | 2121 | 18 | 0 | 30 | 0 | 0 | logfile |
✔ | 7VXC | 32175 | 2022-05-18 | 2021-11-12 | 3.9 | 4.21 | — | 4.1 | 0.002 | 0.40 | 0.0 | 0.04 | 7.11 | 0.00 | 2.022 | 12.45 | 0.00 | 4.2 | 95.8 | 0.0 | -1.96 | 0.63 | 0.62 | 0.87 | 4.1 | 0.008 | 0.85 | 1.0 | 0.04 | 14.01 | 0.00 | 1.727 | 37.75 | 0.30 | 5.6 | 94.3 | 0.1 | -0.77 | 1.70 | 0.67 | 0.73 | 1.15 | 46264 | 3801 | 4 | 0 | 0 | 0 | 16332 | logfile |
✔ | 7P7T | 13244 | 2022-05-21 | 2021-07-20 | 2.9 | 3.42 | 2.91 | 2.2 | 0.004 | 0.40 | 0.0 | 0.03 | 14.00 | 0.01 | 1.679 | 4.50 | 0.66 | 2.6 | 97.4 | 0.0 | 0.93 | 0.89 | 0.91 | 3.72 | 2.1 | 0.007 | 0.67 | 0.0 | 0.04 | 14.89 | 0.01 | 1.728 | 10.64 | 2.08 | 3.4 | 96.6 | 0.0 | 0.40 | 0.41 | 0.89 | 0.92 | 3.35 | 149080 | 6097 | 68 | 4697 | 307 | 1 | 0 | logfile |
✔ | 6J2Q | 9771 | 2022-05-12 | 2019-01-02 | 3.8 | 3.95 | — | 3.9 | 0.002 | 0.40 | 0.0 | 0.04 | 7.17 | 0.00 | 2.202 | 6.66 | 0.00 | 5.5 | 94.4 | 0.1 | -3.50 | 0.77 | 0.68 | 0.88 | 3.9 | 0.004 | 0.80 | 0.0 | 0.04 | 15.39 | 0.00 | 2.012 | 16.29 | 0.52 | 3.9 | 95.9 | 0.1 | -0.67 | 2.27 | 0.82 | 0.76 | 1.04 | 106311 | 13518 | 47 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HD5 | 0201 | 2022-05-13 | 2018-08-17 | 4.8 | 6.01 | — | 5.9 | 0.001 | 0.40 | 0.0 | 0.03 | 8.70 | 0.00 | 2.289 | 4.52 | 0.10 | 10.5 | 88.4 | 1.1 | -1.81 | 0.36 | 0.32 | — | 5.9 | 0.003 | 0.73 | 0.0 | 0.04 | 11.96 | 0.00 | 2.138 | 15.29 | 0.00 | 5.4 | 94.5 | 0.1 | -0.09 | 2.01 | 0.45 | 0.55 | — | 9707 | 1234 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QN6 | 14068 | 2022-05-14 | 2021-12-20 | 2.9 | 2.96 | — | 2.9 | 0.002 | 0.41 | 0.0 | 0.04 | 9.96 | 0.00 | 2.205 | 5.26 | 0.39 | 0.9 | 99.1 | 0.0 | 2.50 | 0.74 | 0.86 | 4.53 | 2.8 | 0.004 | 0.66 | 0.0 | 0.04 | 15.20 | 0.00 | 2.035 | 8.67 | 2.53 | 2.0 | 98.0 | 0.0 | 1.50 | 1.47 | 0.76 | 0.90 | 4.36 | 16821 | 1995 | 20 | 0 | 32 | 0 | 0 | logfile |
✔ | 7EU8 | 31309 | 2022-05-14 | 2021-05-16 | 4.07 | 4.11 | — | 3.6 | 0.002 | 0.41 | 0.0 | 0.04 | 8.07 | 0.00 | 2.206 | 3.16 | 3.51 | 2.0 | 97.9 | 0.1 | 1.10 | 0.75 | 0.61 | — | 3.4 | 0.008 | 0.95 | 1.0 | 0.05 | 8.88 | 0.00 | 1.886 | 10.58 | 0.00 | 5.3 | 94.5 | 0.2 | -0.12 | 1.36 | 0.79 | 0.69 | — | 18670 | 3010 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 7TD2 | 25821 | 2022-05-13 | 2021-12-30 | 3.11 | 3.30 | — | 3.2 | 0.002 | 0.41 | 0.0 | 0.04 | 11.78 | 0.00 | 2.175 | 2.29 | 0.42 | 1.1 | 98.9 | 0.0 | -0.58 | 0.53 | 0.76 | 2.85 | 3.2 | 0.004 | 0.52 | 0.0 | 0.04 | 14.66 | 0.00 | 1.962 | 6.04 | 0.42 | 3.8 | 96.2 | 0.0 | 1.27 | 1.23 | 0.54 | 0.79 | 3.10 | 13528 | 904 | 5 | 0 | 1 | 0 | 6632 | logfile |
✔ | 6X34 | 22017 | 2022-05-17 | 2020-05-21 | 4.7 | 6.14 | 4.99 | 4.8 | 0.001 | 0.41 | 0.0 | 0.03 | 9.38 | 0.00 | 2.258 | 3.87 | 0.61 | 1.6 | 98.4 | 0.0 | -2.99 | 0.74 | 0.66 | — | 4.8 | 0.003 | 0.65 | 0.0 | 0.04 | 9.64 | 0.00 | 2.095 | 12.85 | 0.00 | 4.0 | 96.0 | 0.0 | 0.40 | 0.92 | 0.80 | 0.80 | — | 97888 | 13956 | 12 | 0 | 1320 | 0 | 0 | logfile |
✘ | 7FiJ | 31599 | 2022-05-12 | 2021-07-31 | 3.8 | 2.32 | — | 1.8 | 0.001 | 0.41 | 0.0 | 0.04 | 8.02 | 0.00 | 2.344 | 3.95 | 0.00 | 4.1 | 95.9 | 0.0 | 1.10 | 0.58 | 0.50 | 3.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3061 | 561 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oJN | 12956 | 2022-05-14 | 2021-05-16 | 2.92 | 3.27 | 2.88 | 2.9 | 0.004 | 0.41 | 0.0 | 0.04 | 9.25 | 0.00 | 1.859 | 3.60 | 0.93 | 4.7 | 95.2 | 0.1 | 0.93 | 0.88 | 0.83 | 3.05 | 3.0 | 0.004 | 0.53 | 0.0 | 0.04 | 13.00 | 0.00 | 2.064 | 6.16 | 1.91 | 5.3 | 94.7 | 0.0 | 0.48 | 2.61 | 0.91 | 0.90 | 3.08 | 16991 | 2010 | 6 | 39 | 7 | 0 | 0 | logfile |
✘ | 7PiM | 13442 | 2022-05-13 | 2021-08-20 | 4.6 | 5.02 | 5.18 | 4.6 | 0.002 | 0.41 | 0.0 | 0.03 | 8.31 | 0.00 | 1.900 | 46.18 | 0.67 | 2.0 | 98.0 | 0.0 | 2.23 | 0.81 | 0.76 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11844 | 1412 | 12 | 0 | 8 | 0 | 524 | logfile |
✔ | 7oDR | 12845 | 2022-05-12 | 2021-04-30 | 2.9 | 3.11 | — | 3.0 | 0.002 | 0.41 | 0.0 | 0.03 | 11.10 | 0.02 | 1.963 | 5.13 | 0.44 | 1.1 | 98.9 | 0.0 | 0.96 | 0.74 | 0.80 | 3.31 | 3.0 | 0.008 | 0.86 | 1.0 | 0.04 | 15.38 | 0.01 | 1.509 | 12.18 | 2.44 | 2.3 | 97.7 | 0.0 | 0.57 | 1.25 | 0.76 | 0.83 | 2.88 | 107464 | 9244 | 68 | 1489 | 135 | 0 | 0 | logfile |