Table showing results for December 2021

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7CMU	30410	2021-12-01	2020-07-29	3.0	3.27	—	3.3	0.005	0.49	0.0	0.04	12.33	0.00	1.996	4.07	0.00	1.7	98.3	0.0	2.96	0.61	0.74	2.42	3.3	0.005	0.70	0.0	0.04	16.18	0.01	2.046	8.88	2.81	3.1	96.9	0.0	1.55	1.18	0.66	0.81	2.42	8771	1123	5	0	1	0	0	logfile
✔	6WFQ	21652	2021-12-01	2020-04-03	3.9	4.88	3.77	3.9	0.002	0.49	0.0	0.03	16.66	0.00	2.265	8.11	0.80	4.3	95.7	0.0	-2.49	0.84	0.78	0.76	3.9	0.004	0.91	0.0	0.05	19.24	0.01	2.157	23.46	0.27	6.5	93.5	0.0	-0.40	1.01	0.85	0.81	0.54	4164	447	4	30	0	0	0	logfile
✔	7R8C	24315	2021-12-01	2021-06-26	3.7	4.19	—	4.1	0.002	0.49	0.0	0.04	12.82	0.00	2.073	6.73	0.21	4.8	95.2	0.0	-1.63	0.68	0.85	1.76	4.1	0.003	0.66	0.0	0.04	14.78	0.00	2.158	8.87	0.21	4.9	95.1	0.0	1.23	1.05	0.71	0.87	1.86	8538	1090	2	0	0	0	0	logfile
✔	7V84	31789	2021-12-01	2021-08-22	3.0	3.81	—	3.5	0.002	0.49	0.0	0.04	15.06	0.00	2.199	5.87	0.00	4.3	95.7	0.0	-0.37	0.82	0.87	2.88	3.5	0.003	0.59	0.0	0.05	16.32	0.00	2.178	7.41	0.57	4.7	95.3	0.0	-0.04	0.36	0.78	0.84	2.95	6636	797	9	0	13	0	0	logfile
✔	6Wi9	21683	2021-12-01	2020-04-09	4.3	4.37	4.24	4.3	0.002	0.50	0.0	0.04	12.85	0.00	2.214	5.37	0.00	4.2	95.8	0.0	-3.72	0.77	0.78	—	4.3	0.004	0.73	0.0	0.04	13.93	0.00	2.087	14.09	0.00	6.6	93.4	0.0	-0.58	0.80	0.78	0.78	—	8550	1108	6	0	0	0	0	logfile
✔	6WJ3	21687	2021-12-01	2020-04-11	3.9	4.46	4.05	4.2	0.009	0.50	0.0	0.04	12.83	0.00	2.210	8.22	0.00	4.7	95.2	0.1	-2.80	0.85	0.76	0.95	4.2	0.009	1.04	0.0	0.04	15.41	0.01	1.836	15.75	0.11	6.0	94.0	0.0	-0.67	1.72	0.86	0.78	1.14	8912	1168	10	1	1	0	0	logfile
✔	7CMV	30411	2021-12-01	2020-07-29	2.7	2.91	—	2.9	0.008	0.50	0.0	0.04	12.72	0.00	2.032	3.78	0.00	1.5	98.5	0.0	2.95	0.61	0.78	2.85	2.9	0.003	0.54	0.0	0.04	15.56	0.00	2.140	5.67	1.87	2.0	98.0	0.0	1.94	0.47	0.64	0.84	3.28	8775	1123	5	0	1	0	0	logfile
✔	7E7S	31003	2021-12-01	2021-02-27	3.3	3.32	3.27	3.4	0.003	0.50	0.0	0.04	14.41	0.00	2.166	8.26	0.00	2.6	97.4	0.0	-0.13	0.68	0.82	1.44	3.4	0.003	0.58	0.0	0.04	15.87	0.00	2.214	8.57	0.23	3.1	96.9	0.0	1.43	1.28	0.67	0.82	0.57	7884	1020	1	0	2	0	0	logfile
✔	6UUS	20901	2021-12-01	2019-10-31	2.4	2.10	2.30	2.4	0.002	0.50	0.0	0.04	17.13	0.00	2.214	7.39	3.27	2.8	97.2	0.0	-2.25	0.57	0.72	3.22	2.3	0.002	0.57	0.0	0.04	17.80	0.00	2.176	9.30	2.25	2.6	97.4	0.0	0.57	1.00	0.63	0.76	3.20	9308	1190	7	0	0	0	0	logfile
✔	6WB1	21584	2021-12-01	2020-03-26	4.7	4.87	—	4.6	0.002	0.50	0.0	0.04	12.49	0.00	2.204	7.21	0.55	4.5	95.4	0.1	-4.82	0.86	0.80	—	4.6	0.003	0.61	0.0	0.04	13.12	0.00	2.159	10.71	0.00	4.3	95.7	0.0	-0.90	0.73	0.88	0.84	—	8235	944	4	75	0	0	0	logfile
✔	7L2Z	23146	2021-12-02	2020-12-17	3.4	3.78	—	3.7	0.002	0.50	1.0	0.05	12.49	0.00	1.866	2.68	0.63	3.6	96.4	0.0	-2.91	0.74	0.75	1.52	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	59631	3866	6	0	0	0	29676	logfile
✔	7RPo	24618	2021-12-02	2021-08-03	4.16	2.77	—	1.8	0.003	0.50	0.0	0.04	16.86	0.00	1.759	6.97	1.64	8.5	91.5	0.0	-2.01	0.74	0.71	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10602	1179	9	62	5	0	0	logfile
✔	6V5V	21054	2021-12-01	2019-12-04	3.8	4.01	—	3.9	0.003	0.51	0.0	0.04	13.58	0.00	2.212	6.07	0.00	4.6	95.4	0.0	-2.04	0.52	0.82	2.06	3.9	0.002	0.54	0.0	0.04	14.64	0.00	2.192	7.93	0.30	3.2	96.8	0.0	0.28	0.57	0.53	0.82	1.76	2979	369	1	1	0	0	0	logfile
✔	7P54	13194	2021-12-01	2021-07-14	3.3	3.29	3.21	3.5	0.003	0.51	0.0	0.04	13.48	0.00	2.206	6.98	0.00	1.7	98.3	0.0	4.08	0.53	0.76	1.07	3.5	0.003	0.49	0.0	0.05	15.89	0.00	2.239	6.82	0.15	2.0	98.0	0.0	4.49	1.36	0.55	0.78	1.13	6248	794	8	0	12	0	0	logfile
✔	6NTS	0510	2021-12-01	2019-01-30	3.63	4.31	3.00	3.6	0.016	0.51	0.0	0.03	13.21	0.00	1.917	2.01	0.00	3.8	96.2	0.0	-2.08	0.89	0.77	0.59	3.7	0.003	0.63	0.0	0.04	15.23	0.00	2.078	8.53	0.00	2.4	97.6	0.0	0.80	2.30	0.92	0.85	1.23	9956	1240	5	0	3	0	0	logfile
✔	7E7Z	31005	2021-12-01	2021-02-28	3.2	3.35	2.96	3.4	0.002	0.51	0.0	0.04	13.40	0.00	2.240	9.87	0.00	5.6	94.4	0.0	-0.12	0.63	0.81	1.86	3.3	0.003	0.53	0.0	0.04	15.12	0.00	2.223	8.28	0.23	5.7	94.3	0.0	1.59	0.43	0.57	0.80	1.77	7808	992	4	0	0	0	0	logfile
✔	7RTU	24689	2021-12-01	2021-08-15	3.89	4.06	—	4.1	0.003	0.51	0.0	0.04	14.84	0.00	2.175	7.03	0.16	3.1	96.9	0.0	4.32	0.55	0.69	0.15	4.1	0.003	0.52	0.0	0.04	16.76	0.00	2.223	7.11	0.47	2.5	97.5	0.0	4.38	0.29	0.61	0.73	0.38	5962	754	6	0	12	0	0	logfile
✔	7KAT	22783	2021-12-02	2020-10-01	4.4	5.04	4.41	4.5	0.002	0.51	0.0	0.04	11.32	0.00	2.185	6.85	0.00	1.9	98.1	0.0	-0.63	0.65	0.83	—	4.5	0.002	0.57	0.0	0.04	12.07	0.00	2.070	9.26	0.00	2.1	97.9	0.0	2.26	1.32	0.65	0.85	—	10431	1340	6	0	0	0	0	logfile
✔	6ZXN	11526	2021-12-01	2020-07-30	2.93	3.41	—	3.3	0.003	0.51	0.0	0.04	12.58	0.00	1.940	7.08	0.10	4.5	95.5	0.0	-0.46	0.54	0.73	2.84	3.3	0.004	0.56	0.0	0.04	14.44	0.00	1.910	8.35	0.98	4.6	95.4	0.0	-0.27	1.10	0.52	0.72	2.89	55098	3522	21	0	63	0	26763	logfile
✔	7KAL	22774	2021-12-02	2020-10-01	4.0	4.57	4.10	4.2	0.002	0.51	0.0	0.04	11.87	0.00	2.262	5.74	0.00	2.6	97.3	0.1	-0.72	0.63	0.82	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10789	1429	7	0	0	0	0	logfile

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