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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7KU5 | 23034 | 2022-12-11 | 2020-11-24 | 3.76 | 3.63 | — | 3.9 | 0.006 | 1.29 | 0.0 | 0.07 | 14.85 | 0.01 | 2.420 | 3.63 | 0.00 | 12.8 | 87.2 | 0.0 | -5.41 | 0.23 | 0.65 | -0.48 | 3.9 | 0.002 | 0.73 | 0.0 | 0.04 | 16.42 | 0.01 | 2.247 | 10.16 | 0.00 | 10.5 | 89.5 | 0.0 | -1.80 | 1.30 | 0.25 | 0.68 | 2.01 | 750 | 88 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 6EU3 | 3958 | 2022-12-20 | 2017-10-27 | 3.3 | 3.38 | — | 6.0 | 0.004 | 1.06 | 0.0 | 0.06 | 11.41 | 0.01 | 1.167 | 5.10 | 0.26 | 12.9 | 86.6 | 0.5 | -5.18 | 0.23 | 0.03 | 0.17 | 3.3 | 0.003 | 0.84 | 0.0 | 0.05 | 15.81 | 0.00 | 1.912 | 14.56 | 0.40 | 11.7 | 88.0 | 0.3 | -2.66 | 1.63 | 0.62 | 0.61 | 0.65 | 38330 | 4825 | 22 | 0 | 7 | 0 | 0 | logfile |
✔ | 7LiV | 23386 | 2022-12-22 | 2021-01-28 | 3.6 | 3.63 | — | 3.6 | 0.009 | 0.95 | 1.0 | 0.05 | 13.49 | 0.01 | 1.080 | 27.01 | 2.97 | 4.9 | 94.5 | 0.6 | -3.03 | 0.24 | 0.49 | 0.16 | 3.6 | 0.005 | 0.85 | 0.0 | 0.05 | 17.32 | 0.01 | 2.038 | 15.21 | 1.12 | 6.1 | 93.9 | 0.1 | -1.34 | 1.79 | 0.39 | 0.82 | 1.44 | 47058 | 5903 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 5Li4 | 4052 | 2022-12-14 | 2016-07-14 | 4.2 | 5.13 | — | 4.0 | 0.053 | 3.06 | 114.0 | 0.34 | 14.44 | 0.02 | 0.111 | 93.07 | 2.94 | 14.0 | 79.1 | 6.9 | -4.32 | 0.24 | 0.30 | — | 4.0 | 0.004 | 1.00 | 0.0 | 0.05 | 13.63 | 0.01 | 2.096 | 28.96 | 0.00 | 14.1 | 84.7 | 1.2 | -3.67 | 4.17 | 0.34 | 0.57 | — | 20070 | 2562 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 6RBE | 4794 | 2022-12-19 | 2019-04-10 | 3.8 | 4.03 | 3.73 | 40.0 | 0.007 | 1.27 | 0.0 | 0.06 | 18.44 | 0.01 | 2.076 | 9.23 | 1.35 | 11.9 | 86.8 | 1.2 | -4.17 | 0.25 | 0.02 | 0.00 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 72721 | 4512 | 33 | 1750 | 0 | 0 | 0 | logfile |
✔ | 6VHL | 21207 | 2022-12-11 | 2020-01-10 | 3.3 | 3.60 | — | 3.5 | 0.007 | 1.03 | 0.0 | 0.07 | 15.85 | 0.01 | 1.791 | 16.17 | 4.48 | 14.7 | 85.3 | 0.0 | -6.30 | 0.26 | 0.70 | 3.54 | 3.7 | 0.003 | 0.73 | 0.0 | 0.04 | 16.47 | 0.00 | 2.338 | 9.12 | 0.75 | 10.7 | 89.3 | 0.0 | -3.61 | 2.63 | 0.27 | 0.69 | 3.44 | 1190 | 158 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7U15 | 26278 | 2022-12-11 | 2022-02-19 | 3.0 | 3.14 | — | 3.3 | 0.006 | 1.18 | 0.0 | 0.12 | 17.37 | 0.01 | 1.886 | 12.16 | 3.44 | 3.8 | 96.2 | 0.0 | -6.51 | 0.26 | 0.64 | 1.55 | 3.2 | 0.003 | 0.74 | 0.0 | 0.11 | 17.44 | 0.00 | 1.928 | 11.58 | 3.17 | 16.8 | 83.2 | 0.0 | -5.23 | 1.48 | 0.27 | 0.70 | 2.64 | 6684 | 405 | 6 | 0 | 12 | 0 | 3255 | logfile |
✔ | 6X0U | 21984 | 2022-12-11 | 2020-05-17 | 3.6 | 3.62 | — | 3.6 | 0.004 | 0.62 | 0.0 | 0.04 | 14.50 | 0.00 | 2.277 | 5.74 | 0.00 | 3.7 | 96.1 | 0.3 | -5.79 | 0.26 | 0.78 | 1.89 | 3.6 | 0.002 | 0.69 | 0.0 | 0.03 | 17.56 | 0.00 | 2.197 | 6.86 | 0.29 | 2.9 | 97.1 | 0.0 | 1.58 | 0.81 | 0.27 | 0.78 | 2.25 | 3091 | 398 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QL4 | 14063 | 2022-12-11 | 2021-12-19 | 3.2 | 3.36 | 2.99 | 3.5 | 0.011 | 1.86 | 0.0 | 0.10 | 12.28 | 0.01 | 2.511 | 0.28 | 0.00 | 8.3 | 91.7 | 0.0 | -1.77 | 0.26 | 0.51 | 0.51 | 3.4 | 0.003 | 0.59 | 0.0 | 0.05 | 15.13 | 0.00 | 2.055 | 8.49 | 0.00 | 1.8 | 98.2 | 0.0 | -1.69 | 3.11 | 0.31 | 0.74 | 3.85 | 7074 | 456 | 6 | 0 | 0 | 0 | 3606 | logfile |
✔ | 8A1S | 15086 | 2022-12-13 | 2022-06-02 | 4.0 | 3.83 | 3.95 | 37.0 | 0.008 | 0.74 | 0.0 | 0.05 | 10.01 | 0.00 | 1.988 | 10.32 | 0.97 | 3.9 | 96.0 | 0.2 | -0.24 | 0.26 | 0.00 | — | 3.5 | 0.003 | 0.75 | 0.0 | 0.05 | 12.92 | 0.01 | 1.967 | 15.85 | 0.24 | 4.3 | 95.5 | 0.2 | -1.09 | 1.62 | 0.32 | 0.20 | — | 67152 | 8528 | 32 | 0 | 32 | 0 | 0 | logfile |
✔ | 6SXo | 10344 | 2022-12-13 | 2019-09-26 | 3.3 | 3.36 | — | 3.3 | 0.009 | 1.35 | 0.0 | 0.07 | 16.45 | 0.01 | 2.142 | 6.10 | 1.16 | 4.7 | 95.3 | 0.0 | -4.39 | 0.26 | 0.72 | 2.92 | 3.3 | 0.003 | 0.59 | 0.0 | 0.03 | 16.64 | 0.00 | 2.121 | 10.83 | 0.70 | 3.3 | 96.7 | 0.0 | -1.07 | 0.68 | 0.26 | 0.77 | 2.06 | 14894 | 973 | 8 | 326 | 0 | 0 | 0 | logfile |
✔ | 6iAC | 4435 | 2022-12-11 | 2018-11-26 | 3.9 | 4.05 | — | 4.0 | 0.009 | 1.31 | 0.0 | 0.07 | 12.35 | 0.01 | 2.250 | 5.01 | 1.10 | 12.0 | 87.9 | 0.2 | -4.54 | 0.26 | 0.77 | 1.92 | 4.0 | 0.004 | 0.92 | 0.0 | 0.05 | 16.36 | 0.01 | 2.075 | 12.76 | 0.37 | 8.6 | 91.4 | 0.0 | -0.81 | 1.04 | 0.26 | 0.76 | 1.41 | 8210 | 1057 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 6i5A | 4413 | 2022-12-11 | 2018-11-13 | 2.3 | 2.34 | 1.50 | 2.3 | 0.012 | 1.84 | 1.0 | 0.10 | 14.16 | 0.01 | 2.431 | 6.70 | 0.74 | 1.3 | 97.4 | 1.3 | -0.89 | 0.26 | 0.84 | 3.95 | 2.3 | 0.003 | 0.54 | 0.0 | 0.04 | 16.64 | 0.00 | 2.349 | 2.93 | 4.44 | 2.0 | 98.0 | 0.0 | 2.46 | 1.23 | 0.30 | 0.88 | 4.22 | 1206 | 153 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6M99 | 9050 | 2022-12-19 | 2018-08-23 | 3.4 | 3.37 | — | 3.3 | 0.007 | 0.97 | 0.0 | 0.06 | 10.05 | 0.01 | 2.186 | 7.02 | 0.38 | 5.8 | 94.2 | 0.0 | -4.38 | 0.27 | 0.85 | 3.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 101389 | 13152 | 14 | 0 | 2 | 0 | 0 | logfile |
✔ | 3KTT | 5148 | 2022-12-11 | 2009-11-25 | 4.0 | 2.33 | — | 4.5 | 0.020 | 2.86 | 20.0 | 0.20 | 15.20 | 0.01 | 1.652 | 180.45 | 7.82 | 6.3 | 89.4 | 4.3 | -0.59 | 0.27 | 0.28 | — | 2.0 | 0.004 | 1.18 | 0.0 | 0.05 | 17.18 | 0.01 | 2.023 | 26.84 | 0.49 | 9.4 | 89.6 | 1.0 | -2.22 | 1.72 | 0.31 | 0.41 | — | 3855 | 513 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8AZS | 15770 | 2022-12-12 | 2022-09-06 | 2.9 | 2.78 | 2.55 | 2.8 | 0.011 | 1.50 | 0.0 | 0.12 | 16.09 | 0.01 | 0.017 | 1346.55 | 0.00 | 3.1 | 96.9 | 0.0 | -1.98 | 0.27 | 0.40 | 5.06 | 3.3 | 0.027 | 3.71 | 25.0 | 0.19 | 25.02 | 0.02 | 1.804 | 345.70 | 17.56 | 51.6 | 42.5 | 5.9 | -8.21 | 18.78 | 0.21 | 0.21 | 0.44 | 9036 | 1224 | 36 | 0 | 0 | 0 | 0 | logfile |
✔ | 6EU2 | 3957 | 2022-12-20 | 2017-10-27 | 3.4 | 3.45 | — | 6.0 | 0.004 | 1.04 | 0.0 | 0.06 | 11.35 | 0.01 | 1.787 | 5.07 | 0.40 | 13.0 | 86.5 | 0.5 | -5.22 | 0.27 | 0.04 | 0.18 | 3.4 | 0.006 | 1.12 | 0.0 | 0.06 | 15.75 | 0.01 | 1.981 | 21.10 | 1.13 | 13.5 | 86.0 | 0.5 | -3.25 | 1.81 | 0.67 | 0.67 | 0.69 | 38329 | 4825 | 22 | 0 | 7 | 0 | 0 | logfile |
✔ | 6L4S | 0833 | 2022-12-11 | 2019-10-21 | 3.37 | 3.47 | — | 4.0 | 0.014 | 1.36 | 0.0 | 0.09 | 10.28 | 0.01 | 2.408 | 7.28 | 0.00 | 5.7 | 94.3 | 0.0 | -3.73 | 0.28 | 0.67 | 4.12 | 4.1 | 0.008 | 0.87 | 0.0 | 0.06 | 15.50 | 0.00 | 2.214 | 12.64 | 0.44 | 14.5 | 85.5 | 0.0 | -3.63 | 3.12 | 0.35 | 0.74 | 2.16 | 2268 | 330 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 5MPE | 3535 | 2022-12-21 | 2016-12-16 | 4.5 | 4.55 | — | 4.5 | 0.034 | 3.32 | 297.0 | 0.19 | 17.16 | 0.03 | 1.158 | 3.98 | 2.25 | 5.2 | 92.6 | 2.2 | -1.86 | 0.28 | 0.39 | — | 4.5 | 0.003 | 0.80 | 0.0 | 0.04 | 14.92 | 0.00 | 1.932 | 18.88 | 0.00 | 5.5 | 94.2 | 0.3 | -0.54 | 2.08 | 0.36 | 0.67 | — | 40974 | 5142 | 13 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WCo | 32426 | 2022-12-12 | 2021-12-20 | 3.8 | 3.90 | — | 3.9 | 0.008 | 1.13 | 0.0 | 0.06 | 11.02 | 0.01 | 0.599 | 4.28 | 0.53 | 14.2 | 85.8 | 0.0 | -5.43 | 0.28 | 0.77 | 2.77 | 3.9 | 0.003 | 0.73 | 0.0 | 0.04 | 15.01 | 0.01 | 2.177 | 8.75 | 1.50 | 8.1 | 91.9 | 0.0 | -2.37 | 1.57 | 0.30 | 0.82 | 2.80 | 10740 | 1434 | 18 | 0 | 0 | 0 | 0 | logfile |