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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7X57 | 33010 | 2022-12-12 | 2022-03-04 | 3.63 | 3.95 | — | 3.8 | 0.003 | 0.63 | 0.0 | 0.03 | 28.98 | 0.01 | 2.286 | 9.90 | 0.20 | 1.4 | 98.6 | 0.0 | 0.39 | 0.82 | 0.76 | 1.31 | 3.8 | 0.004 | 0.64 | 0.0 | 0.03 | 30.07 | 0.00 | 2.275 | 12.91 | 0.99 | 2.4 | 97.6 | 0.0 | 2.69 | 0.70 | 0.83 | 0.79 | 1.19 | 9767 | 595 | 10 | 242 | 0 | 0 | 0 | logfile |
✔ | 7PGQ | 13392 | 2022-12-16 | 2021-08-15 | 3.5 | 3.89 | 3.50 | 3.6 | 0.003 | 0.45 | 0.0 | 0.03 | 10.46 | 0.00 | 1.905 | 3.83 | 0.91 | 1.2 | 98.8 | 0.0 | -0.24 | 0.81 | 0.79 | 1.38 | 3.6 | 0.002 | 0.53 | 0.0 | 0.03 | 12.92 | 0.00 | 2.015 | 5.79 | 0.28 | 3.6 | 96.4 | 0.1 | 0.93 | 0.72 | 0.81 | 0.79 | 1.26 | 31508 | 1970 | 3 | 0 | 2 | 0 | 15807 | logfile |
✔ | 7ZW1 | 14991 | 2022-12-12 | 2022-05-17 | 3.7 | 4.52 | 3.66 | 3.9 | 0.002 | 0.50 | 0.0 | 0.03 | 17.28 | 0.00 | 2.021 | 7.62 | 0.16 | 3.1 | 96.9 | 0.0 | 3.09 | 0.65 | 0.80 | 1.73 | 4.0 | 0.002 | 0.48 | 0.0 | 0.03 | 17.37 | 0.00 | 2.034 | 8.22 | 0.32 | 2.3 | 97.7 | 0.0 | 3.27 | 0.70 | 0.65 | 0.79 | 1.44 | 11807 | 760 | 3 | 0 | 0 | 0 | 5883 | logfile |
✔ | 7Z4C | 14493 | 2022-12-13 | 2022-03-03 | 3.87 | 5.00 | 3.91 | 4.1 | 0.003 | 0.45 | 0.0 | 0.03 | 15.32 | 0.00 | 2.232 | 8.16 | 2.06 | 2.5 | 97.5 | 0.0 | 1.06 | 0.91 | 0.83 | 1.82 | 4.1 | 0.002 | 0.59 | 0.0 | 0.04 | 16.68 | 0.00 | 2.158 | 12.49 | 0.33 | 2.7 | 97.3 | 0.0 | 0.97 | 0.70 | 0.91 | 0.84 | 1.25 | 14180 | 1357 | 4 | 148 | 0 | 0 | 0 | logfile |
✔ | 8CVi | 27008 | 2022-12-13 | 2022-05-18 | 3.4 | 3.54 | 3.20 | 3.4 | 0.003 | 0.49 | 0.0 | 0.03 | 13.53 | 0.00 | 2.073 | 8.79 | 0.05 | 4.0 | 95.9 | 0.1 | 1.49 | 0.55 | 0.83 | 1.22 | 3.4 | 0.003 | 0.59 | 1.0 | 0.04 | 16.36 | 0.00 | 2.034 | 10.85 | 0.50 | 4.1 | 95.9 | 0.0 | 3.67 | 2.21 | 0.58 | 0.84 | 0.86 | 66030 | 8856 | 33 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Z4K | 14500 | 2022-12-13 | 2022-03-04 | 3.81 | 4.83 | 3.89 | 3.9 | 0.003 | 0.44 | 0.0 | 0.03 | 14.82 | 0.00 | 2.200 | 9.47 | 0.99 | 2.4 | 97.6 | 0.0 | 1.12 | 0.85 | 0.75 | 0.54 | 4.0 | 0.004 | 0.70 | 0.0 | 0.04 | 16.96 | 0.00 | 2.136 | 22.49 | 0.57 | 5.6 | 94.4 | 0.0 | -0.13 | 1.90 | 0.88 | 0.80 | 0.75 | 14005 | 1360 | 4 | 138 | 0 | 0 | 0 | logfile |
✔ | 7V9C | 31815 | 2022-12-14 | 2021-08-24 | 4.5 | 3.01 | 4.36 | 3.5 | 0.002 | 0.44 | 0.0 | 0.03 | 28.95 | 0.00 | 2.240 | 8.56 | 1.27 | 5.0 | 94.1 | 0.9 | -0.37 | 0.60 | 0.38 | — | 2.9 | 0.004 | 0.75 | 0.0 | 0.04 | 29.43 | 0.01 | 2.091 | 22.31 | 0.16 | 5.4 | 94.5 | 0.1 | 0.35 | 1.77 | 0.73 | 0.57 | — | 23228 | 1518 | 18 | 546 | 0 | 0 | 0 | logfile |
✔ | 7SYN | 25534 | 2022-12-15 | 2021-11-25 | 4.0 | 3.26 | 3.81 | 3.2 | 0.002 | 0.49 | 0.0 | 0.03 | 15.18 | 0.00 | 2.115 | 9.75 | 0.00 | 4.8 | 95.2 | 0.0 | -0.83 | 0.64 | 0.72 | — | 3.2 | 0.006 | 0.80 | 0.0 | 0.04 | 17.19 | 0.01 | 1.963 | 14.74 | 0.71 | 9.9 | 90.1 | 0.0 | -1.89 | 1.06 | 0.65 | 0.75 | — | 78761 | 4891 | 38 | 1859 | 2 | 0 | 0 | logfile |
✔ | 7TTW | 26125 | 2022-12-15 | 2022-02-02 | 2.9 | 2.35 | 2.83 | 2.8 | 0.003 | 0.54 | 0.0 | 0.03 | 15.04 | 0.00 | 2.065 | 3.80 | 0.04 | 4.3 | 95.7 | 0.0 | -2.03 | 0.71 | 0.80 | 3.36 | 2.8 | 0.002 | 0.55 | 0.0 | 0.03 | 15.88 | 0.00 | 2.020 | 4.41 | 3.37 | 4.3 | 95.7 | 0.0 | -1.64 | 0.25 | 0.72 | 0.85 | 2.87 | 80853 | 2661 | 27 | 2801 | 0 | 0 | 0 | logfile |
✔ | 7TTU | 26124 | 2022-12-15 | 2022-02-01 | 3.0 | 2.90 | — | 3.1 | 0.002 | 0.46 | 0.0 | 0.03 | 14.34 | 0.00 | 2.175 | 4.28 | 0.00 | 3.6 | 96.4 | 0.0 | -1.25 | 0.62 | 0.66 | 1.12 | 3.0 | 0.006 | 0.75 | 0.0 | 0.04 | 16.30 | 0.01 | 2.014 | 4.87 | 4.45 | 5.7 | 94.3 | 0.0 | -1.95 | 0.85 | 0.76 | 0.88 | 2.58 | 80724 | 2661 | 27 | 2795 | 0 | 0 | 0 | logfile |
✔ | 7XSM | 33427 | 2022-12-12 | 2022-05-14 | 4.01 | 4.70 | 4.03 | 4.0 | 0.002 | 0.47 | 0.0 | 0.03 | 15.76 | 0.00 | 1.969 | 7.06 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.75 | — | 4.0 | 0.007 | 0.77 | 0.0 | 0.04 | 19.97 | 0.01 | 1.775 | 49.41 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.71 | 0.92 | 0.82 | — | 12464 | 0 | 1 | 388 | 0 | 0 | 4165 | logfile |
✔ | 8CZi | 27098 | 2022-12-11 | 2022-05-24 | 2.22 | 2.26 | 2.61 | 2.0 | 0.004 | 0.33 | 0.0 | 0.03 | 14.48 | 0.00 | 2.382 | 6.62 | 0.00 | 0.0 | 100.0 | 0.0 | 2.90 | 0.78 | 0.80 | 1.97 | 2.0 | 0.004 | 0.40 | 0.0 | 0.03 | 15.24 | 0.00 | 2.167 | 6.23 | 0.00 | 0.0 | 100.0 | 0.0 | 5.34 | 0.86 | 0.83 | 0.84 | 1.97 | 2550 | 339 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7E9C | 31029 | 2022-12-15 | 2021-03-04 | 3.5 | 4.28 | 3.62 | 4.0 | 0.003 | 0.58 | 0.0 | 0.03 | 26.96 | 0.00 | 2.221 | 12.83 | 0.14 | 3.3 | 96.7 | 0.0 | 0.16 | 0.78 | 0.69 | 0.28 | 4.0 | 0.004 | 0.69 | 0.0 | 0.04 | 28.66 | 0.01 | 2.126 | 18.84 | 1.11 | 4.9 | 95.1 | 0.0 | -0.16 | 1.93 | 0.82 | 0.78 | 0.87 | 12338 | 898 | 11 | 260 | 0 | 0 | 0 | logfile |
✔ | 7TCP | 25816 | 2022-12-13 | 2021-12-27 | 3.84 | 3.97 | — | 3.9 | 0.002 | 0.37 | 0.0 | 0.03 | 9.57 | 0.00 | 2.327 | 4.21 | 1.26 | 2.8 | 97.2 | 0.0 | 2.66 | 0.70 | 0.81 | 2.29 | 3.9 | 0.002 | 0.48 | 0.0 | 0.04 | 12.83 | 0.00 | 2.136 | 4.68 | 0.20 | 2.6 | 97.4 | 0.0 | 2.73 | 0.36 | 0.71 | 0.83 | 2.13 | 14992 | 1912 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 7TB3 | 25791 | 2022-12-22 | 2021-12-21 | 2.57 | 3.30 | — | 3.1 | 0.002 | 0.41 | 0.0 | 0.03 | 9.42 | 0.00 | 2.212 | 4.57 | 1.06 | 9.5 | 90.1 | 0.4 | 0.76 | 0.74 | 0.74 | 1.78 | 3.0 | 0.004 | 0.66 | 0.0 | 0.04 | 15.18 | 0.00 | 2.152 | 9.23 | 1.88 | 3.0 | 97.0 | 0.0 | 3.05 | 0.99 | 0.74 | 0.86 | 2.01 | 48000 | 5832 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Z4H | 14497 | 2022-12-13 | 2022-03-03 | 3.49 | 4.59 | 3.66 | 3.8 | 0.003 | 0.45 | 0.0 | 0.03 | 13.12 | 0.00 | 2.043 | 10.10 | 1.25 | 2.0 | 98.0 | 0.0 | 1.67 | 0.90 | 0.83 | 1.71 | 3.8 | 0.003 | 0.52 | 0.0 | 0.03 | 14.70 | 0.00 | 2.157 | 12.88 | 0.17 | 2.7 | 97.3 | 0.0 | 1.75 | 1.66 | 0.91 | 0.85 | 1.69 | 13900 | 1334 | 4 | 142 | 0 | 0 | 0 | logfile |
✔ | 7TBH | 25799 | 2022-12-22 | 2021-12-22 | 2.3 | 3.49 | — | 2.8 | 0.001 | 0.43 | 0.0 | 0.03 | 8.12 | 0.00 | 2.141 | 6.38 | 0.43 | 7.8 | 91.4 | 0.8 | 0.80 | 0.78 | 0.76 | 0.52 | 2.8 | 0.003 | 0.66 | 0.0 | 0.04 | 13.86 | 0.00 | 2.130 | 8.18 | 0.55 | 2.1 | 97.5 | 0.4 | 2.83 | 0.95 | 0.81 | 0.88 | 2.83 | 51768 | 6288 | 48 | 0 | 0 | 0 | 0 | logfile |
✔ | 7X58 | 33011 | 2022-12-12 | 2022-03-04 | 3.93 | 4.15 | — | 3.9 | 0.003 | 0.56 | 0.0 | 0.03 | 27.31 | 0.00 | 2.221 | 7.16 | 0.00 | 0.9 | 99.1 | 0.0 | 0.68 | 0.86 | 0.80 | 1.58 | 3.9 | 0.004 | 0.71 | 0.0 | 0.04 | 29.66 | 0.00 | 2.214 | 15.06 | 0.99 | 2.4 | 97.6 | 0.0 | 2.24 | 1.37 | 0.88 | 0.83 | 0.65 | 9775 | 596 | 10 | 242 | 0 | 0 | 0 | logfile |
✔ | 7Z4G | 14496 | 2022-12-12 | 2022-03-03 | 3.64 | 4.65 | 3.78 | 3.9 | 0.003 | 0.48 | 0.0 | 0.03 | 13.82 | 0.00 | 2.209 | 12.87 | 1.03 | 1.9 | 98.1 | 0.0 | 1.30 | 0.85 | 0.76 | 0.95 | 3.9 | 0.003 | 0.60 | 0.0 | 0.04 | 16.43 | 0.00 | 2.168 | 19.12 | 0.38 | 3.7 | 96.2 | 0.1 | 0.90 | 2.10 | 0.86 | 0.78 | 0.45 | 12714 | 1188 | 4 | 144 | 0 | 0 | 0 | logfile |
✔ | 7NAF | 24271 | 2022-12-14 | 2021-06-21 | 3.13 | 3.14 | 3.06 | 3.1 | 0.005 | 0.59 | 0.0 | 0.03 | 15.35 | 0.01 | 2.172 | 7.16 | 0.00 | 4.2 | 95.8 | 0.0 | 0.43 | 0.70 | 0.78 | 3.17 | 3.1 | 0.004 | 0.62 | 0.0 | 0.04 | 16.47 | 0.00 | 2.106 | 7.07 | 0.00 | 5.6 | 94.4 | 0.0 | 0.06 | 0.30 | 0.71 | 0.82 | 3.07 | 18868 | 1342 | 17 | 378 | 0 | 2 | 0 | logfile |