Table showing results for July 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	7LQi	23487	2022-07-03	2021-02-13	3.5	3.92	—	3.9	0.016	1.40	0.0	0.03	20.42	0.00	2.242	22.86	5.00	0.0	100.0	0.0	-3.42	0.62	0.78	4.80	3.9	0.051	2.84	5.0	0.14	22.95	0.01	1.918	120.83	3.83	46.2	53.8	0.0	-7.03	1.54	0.65	0.83	2.47	8400	800	100	0	0	0	0	logfile
✔	7RZV	24779	2022-07-02	2021-08-27	2.11	2.24	—	2.0	0.005	0.35	0.0	0.03	14.68	0.00	2.348	5.44	0.00	0.0	100.0	0.0	3.06	0.79	0.80	2.21	2.0	0.004	0.36	0.0	0.03	15.90	0.00	2.235	5.24	0.34	0.0	100.0	0.0	5.91	0.88	0.83	0.82	1.88	2562	339	6	0	0	0	0	logfile
✔	7Q2Z	13786	2022-07-03	2021-10-26	3.2	2.91	3.15	3.2	0.002	0.48	0.0	0.03	18.78	0.00	2.227	4.26	0.00	6.5	93.4	0.1	-1.44	0.67	0.80	2.05	3.2	0.002	0.53	0.0	0.03	19.97	0.00	2.116	3.52	0.00	2.1	97.7	0.1	2.12	1.23	0.71	0.85	1.71	8258	902	4	46	0	0	0	logfile
✘	7QWQ	14191	2022-07-07	2022-01-25	2.83	2.26	—	2.7	0.002	0.53	0.0	0.03	14.96	0.01	1.516	9.20	0.03	4.6	95.4	0.0	0.48	0.46	0.66	1.64	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	143809	7312	59	3936	158	0	0	logfile
✘	7oDS	12846	2022-07-03	2021-04-30	3.1	3.32	—	3.1	0.002	0.40	0.0	0.03	11.11	0.00	1.207	5.15	0.51	1.2	98.8	0.0	0.91	0.78	0.76	2.42	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	108339	9371	67	1487	132	0	0	logfile
✔	7RZS	24776	2022-07-02	2021-08-27	2.52	2.32	—	2.1	0.005	0.46	0.0	0.03	14.73	0.00	2.273	3.04	0.00	1.0	99.0	0.0	1.98	0.77	0.79	1.82	2.0	0.003	0.43	0.0	0.04	15.95	0.00	2.318	4.66	0.71	0.0	100.0	0.0	5.82	1.18	0.78	0.81	1.27	2445	324	6	0	0	0	0	logfile
✔	7QV2	14158	2022-07-07	2022-01-19	3.5	3.59	—	3.2	0.002	0.48	0.0	0.03	15.58	0.00	1.833	6.01	0.25	4.7	95.2	0.1	-1.90	0.77	0.82	1.24	3.2	0.004	0.70	0.0	0.04	16.91	0.01	1.982	16.74	1.16	7.9	92.0	0.1	-1.32	3.66	0.78	0.86	1.16	142856	5268	53	4726	24	0	0	logfile
✔	7oQZ	13035	2022-07-03	2021-06-04	3.27	3.59	3.75	3.8	0.009	0.98	0.0	0.03	13.71	0.00	2.257	3.35	0.51	1.3	98.7	0.0	4.83	0.61	0.78	2.67	3.8	0.004	0.68	0.0	0.04	17.14	0.00	2.171	10.48	0.77	3.2	96.8	0.0	3.30	0.82	0.62	0.81	2.22	7996	948	8	0	16	0	0	logfile
✔	7QWS	14193	2022-07-06	2022-01-25	3.4	3.09	—	7.2	0.002	0.46	0.0	0.03	14.64	0.00	2.011	9.49	1.65	3.7	96.3	0.0	0.47	0.23	0.02	-0.02	3.0	0.008	1.22	3.0	0.06	19.93	0.01	0.959	37.21	0.73	12.5	87.4	0.1	-3.55	1.98	0.49	0.54	0.44	137913	7047	55	3769	126	0	0	logfile
✔	7TB3	25791	2022-07-08	2021-12-21	2.57	3.30	—	3.1	0.002	0.41	0.0	0.03	9.42	0.00	2.212	4.57	1.06	9.5	90.1	0.4	0.76	0.74	0.74	1.78	3.0	0.003	0.64	0.0	0.04	15.25	0.00	2.145	9.47	1.65	3.0	97.0	0.0	3.19	0.98	0.73	0.84	2.00	48000	5832	24	0	0	0	0	logfile
✘	7oDR	12845	2022-07-02	2021-04-30	2.9	3.11	—	3.0	0.002	0.40	0.0	0.03	11.06	0.00	1.208	5.13	0.44	1.1	98.9	0.0	0.96	0.74	0.80	3.31	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	107464	9244	68	1489	135	0	0	logfile
✘	7P7T	13244	2022-07-09	2021-07-20	2.9	3.42	2.91	2.2	0.003	0.40	0.0	0.03	13.97	0.00	0.923	4.50	0.66	2.6	97.4	0.0	0.93	0.89	0.91	3.72	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	149080	6097	68	4697	307	1	0	logfile
✔	7QV1	14157	2022-07-07	2022-01-19	3.5	3.50	—	3.2	0.002	0.51	0.0	0.03	15.47	0.00	1.575	5.98	0.41	5.1	94.8	0.1	-2.06	0.73	0.82	1.19	3.2	0.004	0.69	0.0	0.04	16.92	0.01	1.991	16.53	0.93	7.5	92.4	0.1	-1.44	1.77	0.75	0.85	1.23	140774	5254	53	4635	24	0	0	logfile
✔	7QWR	14192	2022-07-06	2022-01-25	2.9	2.44	—	2.9	0.002	0.47	0.0	0.03	14.58	0.00	2.054	7.64	0.72	5.1	94.8	0.1	-0.61	0.48	0.71	2.26	2.7	0.004	0.80	0.0	0.04	17.77	0.01	1.864	9.22	4.61	5.8	94.2	0.0	-1.02	1.39	0.52	0.80	2.96	134576	6621	55	3769	126	0	0	logfile
✘	7P7S	13243	2022-07-08	2021-07-20	3.0	3.49	2.93	2.0	0.005	0.47	0.0	0.03	14.02	0.00	1.182	5.65	0.78	2.6	97.4	0.0	0.77	0.89	0.91	3.48	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	147573	6097	68	4625	349	0	0	logfile
✔	7RZQ	24774	2022-07-02	2021-08-27	2.09	2.26	—	2.7	0.006	0.40	0.0	0.03	14.23	0.00	2.339	4.69	0.00	1.9	98.1	0.0	2.15	0.78	0.79	1.56	2.0	0.003	0.30	0.0	0.03	15.08	0.00	2.337	5.30	0.36	0.0	100.0	0.0	5.90	0.30	0.81	0.82	1.87	2421	322	6	0	0	0	0	logfile
✘	7oDT	12847	2022-07-03	2021-04-30	3.1	3.31	—	3.1	0.002	0.40	0.0	0.03	10.95	0.00	1.207	5.39	0.53	1.2	98.8	0.0	1.05	0.77	0.79	2.84	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	110473	9585	71	1526	110	0	0	logfile
✔	7QEW	13943	2022-07-03	2021-12-03	2.1	2.62	—	2.2	0.009	0.60	0.0	0.03	11.35	0.00	2.191	3.73	2.18	3.3	96.7	0.0	1.32	0.78	0.89	4.62	2.3	0.003	0.66	0.0	0.04	14.63	0.00	2.197	5.67	1.29	2.9	97.1	0.0	2.91	1.06	0.79	0.92	3.45	9702	1128	18	0	30	234	0	logfile
✔	7RZT	24777	2022-07-02	2021-08-27	2.35	2.27	—	2.1	0.005	0.32	0.0	0.03	14.89	0.00	2.388	3.83	0.00	2.9	97.1	0.0	2.81	0.77	0.79	2.62	2.0	0.003	0.32	0.0	0.03	15.54	0.00	2.332	5.44	0.35	0.0	100.0	0.0	6.21	0.24	0.80	0.82	3.03	2451	324	6	0	0	0	0	logfile
✘	7RYH	24740	2022-07-06	2021-08-25	2.43	1.94	—	2.2	0.002	0.54	0.0	0.03	15.81	0.00	1.184	3.81	2.55	2.2	97.7	0.1	1.17	0.77	0.74	2.99	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	135829	5499	53	4328	8	0	0	logfile

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