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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6K9F | 9948 | 2022-05-14 | 2019-06-15 | 3.7 | 7.50 | 4.15 | 7.2 | 0.002 | 0.45 | 0.0 | 0.03 | 11.87 | 0.00 | 2.356 | 5.29 | 0.00 | 0.0 | 100.0 | 0.0 | -0.68 | 0.66 | 0.76 | 0.04 | 7.0 | 0.004 | 1.14 | 0.0 | 0.05 | 18.10 | 0.00 | 2.005 | 26.86 | 0.63 | 1.3 | 98.7 | 0.0 | -0.41 | 3.86 | 0.67 | 0.84 | 0.10 | 8484 | 1044 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oBQ | 12799 | 2022-05-14 | 2021-04-23 | 3.9 | 4.22 | — | 3.9 | 0.003 | 0.48 | 0.0 | 0.03 | 12.88 | 0.00 | 2.106 | 9.25 | 2.63 | 2.7 | 97.3 | 0.0 | 1.55 | 0.76 | 0.79 | 0.82 | 3.9 | 0.011 | 1.11 | 0.0 | 0.04 | 15.51 | 0.00 | 1.846 | 21.29 | 0.37 | 4.1 | 95.9 | 0.0 | 0.39 | 1.25 | 0.77 | 0.81 | 0.90 | 16668 | 1642 | 11 | 165 | 39 | 0 | 0 | logfile |
✔ | 6PC7 | 20298 | 2022-05-15 | 2019-06-16 | 2.5 | 3.01 | — | 2.9 | 0.006 | 0.50 | 0.0 | 0.03 | 12.79 | 0.02 | 1.954 | 2.86 | 2.23 | 6.2 | 93.7 | 0.1 | -3.93 | 0.66 | 0.85 | 3.71 | 2.9 | 0.004 | 0.61 | 0.0 | 0.03 | 14.37 | 0.01 | 2.018 | 7.85 | 3.55 | 6.8 | 93.0 | 0.2 | -0.97 | 1.25 | 0.66 | 0.88 | 3.95 | 72146 | 964 | 8 | 3015 | 1 | 0 | 0 | logfile |
✔ | 6Z5L | 11079 | 2022-05-25 | 2020-05-26 | 3.8 | 4.08 | — | 3.9 | 0.004 | 0.63 | 0.0 | 0.03 | 15.41 | 0.00 | 1.986 | 3.72 | 0.00 | 5.2 | 94.8 | 0.0 | 1.60 | 0.53 | 0.68 | 0.31 | 3.9 | 0.004 | 0.73 | 0.0 | 0.04 | 17.30 | 0.00 | 2.134 | 14.41 | 0.27 | 4.6 | 95.4 | 0.0 | 2.36 | 1.29 | 0.58 | 0.86 | 1.00 | 154880 | 20080 | 80 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PCT | 20307 | 2022-05-15 | 2019-06-18 | 2.8 | 3.01 | — | 2.9 | 0.006 | 0.52 | 2.0 | 0.03 | 12.86 | 0.02 | 1.891 | 2.99 | 2.50 | 6.3 | 93.6 | 0.1 | -3.70 | 0.66 | 0.85 | 4.28 | 2.9 | 0.005 | 0.67 | 0.0 | 0.04 | 14.69 | 0.01 | 2.086 | 8.30 | 3.68 | 6.6 | 93.3 | 0.1 | -0.91 | 0.41 | 0.68 | 0.89 | 4.30 | 72198 | 964 | 8 | 3015 | 1 | 0 | 0 | logfile |
✔ | 7JiL | 22345 | 2022-05-16 | 2020-07-23 | 2.8 | 3.31 | — | 3.2 | 0.002 | 0.48 | 0.0 | 0.03 | 14.70 | 0.00 | 1.987 | 6.79 | 2.15 | 9.9 | 90.0 | 0.1 | -3.96 | 0.82 | 0.84 | 2.44 | 3.2 | 0.007 | 0.70 | 0.0 | 0.04 | 15.87 | 0.01 | 1.790 | 6.52 | 5.13 | 12.3 | 87.6 | 0.1 | -2.42 | 0.39 | 0.75 | 0.79 | 2.78 | 133098 | 5314 | 64 | 4327 | 325 | 36 | 0 | logfile |
✔ | 6W7N | 21572 | 2022-05-17 | 2020-03-19 | 3.4 | 3.72 | — | 3.6 | 0.002 | 0.46 | 0.0 | 0.03 | 14.05 | 0.00 | 1.907 | 8.15 | 0.08 | 8.2 | 91.5 | 0.3 | -4.03 | 0.78 | 0.78 | 1.44 | 3.6 | 0.007 | 0.73 | 0.0 | 0.04 | 15.89 | 0.01 | 2.082 | 12.57 | 1.30 | 12.0 | 87.7 | 0.4 | -2.51 | 1.25 | 0.79 | 0.79 | 1.50 | 42287 | 1660 | 15 | 1372 | 0 | 0 | 0 | logfile |
✔ | 6VWM | 21421 | 2022-05-17 | 2020-02-20 | 3.4 | 3.74 | — | 3.2 | 0.003 | 0.59 | 0.0 | 0.03 | 14.75 | 0.00 | 1.963 | 7.04 | 1.73 | 5.0 | 95.0 | 0.0 | -3.11 | 0.82 | 0.83 | 1.68 | 3.2 | 0.005 | 0.70 | 0.0 | 0.04 | 16.61 | 0.00 | 1.825 | 18.46 | 0.76 | 7.3 | 92.7 | 0.0 | -1.65 | 2.10 | 0.83 | 0.86 | 1.57 | 140044 | 5342 | 57 | 4580 | 53 | 0 | 0 | logfile |
✔ | 6PC6 | 20297 | 2022-05-15 | 2019-06-16 | 2.5 | 3.08 | — | 2.9 | 0.008 | 0.50 | 0.0 | 0.03 | 12.75 | 0.02 | 1.930 | 2.96 | 2.11 | 6.3 | 93.7 | 0.0 | -3.58 | 0.73 | 0.88 | 4.50 | 2.9 | 0.004 | 0.63 | 0.0 | 0.03 | 14.58 | 0.01 | 1.976 | 7.98 | 3.42 | 6.7 | 93.1 | 0.2 | -0.78 | 0.91 | 0.74 | 0.90 | 4.21 | 72127 | 963 | 8 | 3015 | 1 | 0 | 0 | logfile |
✔ | 6X34 | 22017 | 2022-05-17 | 2020-05-21 | 4.7 | 6.14 | 4.99 | 4.8 | 0.001 | 0.41 | 0.0 | 0.03 | 9.38 | 0.00 | 2.258 | 3.87 | 0.61 | 1.6 | 98.4 | 0.0 | -2.99 | 0.74 | 0.66 | — | 4.8 | 0.003 | 0.65 | 0.0 | 0.04 | 9.64 | 0.00 | 2.095 | 12.85 | 0.00 | 4.0 | 96.0 | 0.0 | 0.40 | 0.92 | 0.80 | 0.80 | — | 97888 | 13956 | 12 | 0 | 1320 | 0 | 0 | logfile |
✔ | 6ZoK | 11321 | 2022-05-18 | 2020-07-07 | 2.8 | 2.96 | 2.77 | 2.9 | 0.003 | 0.52 | 0.0 | 0.03 | 14.36 | 0.00 | 1.989 | 4.11 | 1.48 | 2.2 | 97.8 | 0.0 | 0.55 | 0.74 | 0.86 | 4.30 | 2.9 | 0.007 | 0.68 | 0.0 | 0.04 | 16.03 | 0.01 | 1.814 | 4.24 | 2.85 | 2.9 | 97.1 | 0.0 | 0.44 | 1.56 | 0.75 | 0.88 | 4.00 | 50192 | 2970 | 26 | 1232 | 110 | 0 | 0 | logfile |
✔ | 7BL6 | 12219 | 2022-05-16 | 2021-01-18 | 4.0 | 7.11 | — | 4.0 | 0.002 | 0.42 | 0.0 | 0.03 | 13.17 | 0.00 | 2.117 | 11.03 | 0.07 | 4.7 | 95.3 | 0.1 | -0.28 | 0.92 | 0.83 | — | 4.0 | 0.004 | 0.66 | 0.0 | 0.03 | 16.96 | 0.00 | 1.946 | 35.11 | 0.17 | 8.2 | 91.8 | 0.1 | -1.70 | 3.13 | 0.95 | 0.82 | — | 92769 | 3600 | 42 | 3016 | 5 | 27 | 0 | logfile |
✔ | 7BL5 | 12218 | 2022-05-17 | 2021-01-18 | 3.3 | 3.74 | — | 3.5 | 0.002 | 0.45 | 0.0 | 0.03 | 14.15 | 0.00 | 2.029 | 11.86 | 0.11 | 5.7 | 94.3 | 0.0 | -1.05 | 0.75 | 0.79 | 1.02 | 3.5 | 0.004 | 0.64 | 1.0 | 0.03 | 15.81 | 0.00 | 1.958 | 17.19 | 0.88 | 7.9 | 92.1 | 0.0 | -1.73 | 0.57 | 0.76 | 0.83 | 1.21 | 98927 | 4348 | 46 | 3033 | 3 | 27 | 0 | logfile |
✔ | 7BL4 | 12217 | 2022-05-16 | 2021-01-18 | 2.4 | 3.20 | — | 3.0 | 0.002 | 0.45 | 0.0 | 0.03 | 13.36 | 0.00 | 2.015 | 9.01 | 0.03 | 5.1 | 94.9 | 0.1 | -0.52 | 0.80 | 0.85 | 2.49 | 3.0 | 0.006 | 0.66 | 0.0 | 0.04 | 14.81 | 0.01 | 1.760 | 12.32 | 3.73 | 7.1 | 92.8 | 0.1 | -1.15 | 1.11 | 0.79 | 0.87 | 2.29 | 93560 | 3702 | 47 | 3016 | 9 | 35 | 0 | logfile |
✔ | 7NFX | 12303 | 2022-05-21 | 2021-02-08 | 3.2 | 3.29 | — | 3.3 | 0.002 | 0.53 | 0.0 | 0.03 | 15.77 | 0.00 | 2.097 | 8.89 | 3.98 | 4.9 | 95.0 | 0.1 | 0.36 | 0.55 | 0.78 | 2.57 | 3.2 | 0.006 | 0.70 | 1.0 | 0.04 | 17.02 | 0.01 | 2.003 | 9.81 | 0.59 | 5.6 | 94.4 | 0.1 | 0.02 | 0.54 | 0.57 | 0.83 | 2.38 | 148232 | 7672 | 62 | 4018 | 30 | 0 | 0 | logfile |
✔ | 7o5H | 12736 | 2022-05-16 | 2021-04-08 | 3.1 | 2.93 | 3.04 | 2.8 | 0.002 | 0.33 | 0.0 | 0.03 | 12.30 | 0.00 | 1.262 | 5.95 | 0.98 | 2.1 | 97.9 | 0.0 | 1.09 | 0.86 | 0.83 | 1.84 | 2.8 | 0.006 | 0.67 | 0.0 | 0.04 | 14.61 | 0.01 | 1.074 | 13.60 | 0.42 | 3.8 | 96.2 | 0.0 | 0.27 | 1.48 | 0.87 | 0.85 | 1.30 | 34436 | 1730 | 22 | 964 | 167 | 0 | 0 | logfile |
✔ | 7oDS | 12846 | 2022-05-12 | 2021-04-30 | 3.1 | 3.32 | — | 3.1 | 0.002 | 0.40 | 0.0 | 0.03 | 11.15 | 0.02 | 2.009 | 5.15 | 0.51 | 1.2 | 98.8 | 0.0 | 0.91 | 0.78 | 0.76 | 2.42 | 3.1 | 0.006 | 0.77 | 1.0 | 0.04 | 14.75 | 0.01 | 1.478 | 11.86 | 0.36 | 3.3 | 96.7 | 0.0 | 0.33 | 1.69 | 0.79 | 0.79 | 2.24 | 108339 | 9371 | 67 | 1487 | 132 | 0 | 0 | logfile |
✔ | 7oDR | 12845 | 2022-05-12 | 2021-04-30 | 2.9 | 3.11 | — | 3.0 | 0.002 | 0.41 | 0.0 | 0.03 | 11.10 | 0.02 | 1.963 | 5.13 | 0.44 | 1.1 | 98.9 | 0.0 | 0.96 | 0.74 | 0.80 | 3.31 | 3.0 | 0.008 | 0.86 | 1.0 | 0.04 | 15.38 | 0.01 | 1.509 | 12.18 | 2.44 | 2.3 | 97.7 | 0.0 | 0.57 | 1.25 | 0.76 | 0.83 | 2.88 | 107464 | 9244 | 68 | 1489 | 135 | 0 | 0 | logfile |
✔ | 6W7M | 21571 | 2022-05-18 | 2020-03-19 | 3.8 | 3.72 | — | 3.6 | 0.002 | 0.58 | 0.0 | 0.03 | 16.56 | 0.00 | 2.031 | 14.83 | 0.10 | 7.4 | 92.3 | 0.3 | -3.67 | 0.68 | 0.56 | 0.12 | 3.6 | 0.009 | 1.11 | 2.0 | 0.05 | 18.82 | 0.01 | 1.977 | 32.75 | 0.89 | 14.0 | 85.7 | 0.4 | -3.21 | 1.33 | 0.72 | 0.62 | 0.56 | 50694 | 2319 | 20 | 1512 | 0 | 0 | 0 | logfile |
✔ | 6ZoJ | 11320 | 2022-05-15 | 2020-07-07 | 2.8 | 3.07 | — | 3.0 | 0.002 | 0.51 | 0.0 | 0.03 | 14.31 | 0.00 | 1.694 | 4.49 | 1.39 | 2.3 | 97.7 | 0.0 | 0.76 | 0.80 | 0.85 | 3.50 | 2.9 | 0.007 | 0.69 | 0.0 | 0.04 | 16.02 | 0.01 | 1.068 | 5.53 | 2.64 | 3.5 | 96.5 | 0.0 | 0.48 | 2.45 | 0.81 | 0.87 | 3.31 | 75783 | 4914 | 45 | 1704 | 169 | 0 | 0 | logfile |