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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7TP9 | 26049 | 2022-12-15 | 2022-01-25 | 3.48 | 3.86 | — | 3.5 | 0.013 | 1.76 | 6.0 | 0.09 | 12.66 | 0.01 | 2.518 | 0.13 | 0.94 | 6.9 | 92.4 | 0.7 | -0.96 | 0.84 | 0.84 | 3.41 | 3.5 | 0.004 | 0.63 | 0.0 | 0.04 | 13.46 | 0.00 | 2.021 | 5.71 | 0.13 | 5.8 | 94.1 | 0.1 | 0.17 | 0.49 | 0.85 | 0.87 | 2.70 | 23199 | 2983 | 18 | 0 | 58 | 0 | 0 | logfile |
✔ | 7SCZ | 25043 | 2022-12-14 | 2021-09-29 | 3.5 | 4.01 | 3.49 | 3.8 | 0.014 | 1.91 | 1.0 | 0.09 | 27.47 | 0.03 | 2.529 | 0.13 | 0.00 | 1.7 | 98.3 | 0.0 | 0.09 | 0.80 | 0.77 | 2.51 | 3.8 | 0.005 | 0.64 | 0.0 | 0.04 | 27.86 | 0.00 | 1.978 | 6.73 | 0.28 | 2.3 | 97.7 | 0.0 | 2.83 | 1.42 | 0.79 | 0.80 | 1.56 | 23205 | 850 | 11 | 294 | 0 | 0 | 10435 | logfile |
✔ | 7LYo | 23597 | 2022-12-15 | 2021-03-07 | 3.32 | 3.53 | — | 3.5 | 0.013 | 1.74 | 5.0 | 0.09 | 12.44 | 0.01 | 2.511 | 0.13 | 0.43 | 5.4 | 94.3 | 0.3 | -0.89 | 0.78 | 0.83 | 3.84 | 3.5 | 0.005 | 0.65 | 0.0 | 0.05 | 14.24 | 0.00 | 2.164 | 6.76 | 0.35 | 3.9 | 96.0 | 0.1 | 0.25 | 0.66 | 0.81 | 0.87 | 3.01 | 23649 | 2982 | 6 | 0 | 40 | 0 | 0 | logfile |
✔ | 7TPF | 26053 | 2022-12-15 | 2022-01-25 | 3.4 | 3.74 | — | 3.4 | 0.013 | 1.75 | 3.0 | 0.09 | 12.67 | 0.01 | 2.518 | 0.13 | 0.72 | 6.1 | 93.5 | 0.3 | -0.86 | 0.84 | 0.86 | 3.82 | 3.4 | 0.003 | 0.60 | 0.0 | 0.04 | 13.29 | 0.00 | 2.204 | 4.45 | 0.09 | 4.2 | 95.7 | 0.1 | 0.35 | 0.45 | 0.85 | 0.87 | 3.19 | 23199 | 2983 | 18 | 0 | 58 | 0 | 0 | logfile |
✔ | 7QK1 | 14028 | 2022-12-11 | 2021-12-17 | 3.03 | 3.20 | 2.13 | 3.2 | 0.011 | 1.97 | 2.0 | 0.11 | 12.98 | 0.01 | 2.502 | 0.14 | 0.00 | 5.5 | 94.5 | 0.0 | -1.61 | 0.48 | 0.84 | 4.10 | 3.2 | 0.006 | 0.81 | 0.0 | 0.05 | 16.34 | 0.00 | 2.070 | 6.83 | 1.01 | 4.1 | 95.9 | 0.0 | -1.96 | 3.39 | 0.42 | 0.84 | 4.26 | 3444 | 450 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LWP | 23553 | 2022-12-15 | 2021-03-01 | 3.01 | 3.22 | — | 3.2 | 0.013 | 1.79 | 8.0 | 0.09 | 13.56 | 0.01 | 2.498 | 0.15 | 1.14 | 5.6 | 93.9 | 0.5 | -1.08 | 0.74 | 0.81 | 3.01 | 3.2 | 0.004 | 0.62 | 0.0 | 0.04 | 14.62 | 0.00 | 2.142 | 5.05 | 0.31 | 4.3 | 95.7 | 0.0 | 0.36 | 1.23 | 0.75 | 0.84 | 2.81 | 23499 | 2982 | 6 | 0 | 31 | 0 | 0 | logfile |
✔ | 7LYN | 23596 | 2022-12-15 | 2021-03-07 | 3.32 | 3.52 | — | 3.5 | 0.013 | 1.74 | 1.0 | 0.09 | 12.67 | 0.01 | 2.504 | 0.15 | 0.86 | 5.8 | 94.0 | 0.3 | -0.95 | 0.77 | 0.84 | 3.55 | 3.5 | 0.003 | 0.58 | 0.0 | 0.04 | 14.26 | 0.00 | 2.221 | 5.45 | 0.20 | 3.1 | 96.8 | 0.1 | 0.62 | 0.64 | 0.81 | 0.86 | 2.84 | 23641 | 2985 | 6 | 0 | 38 | 0 | 0 | logfile |
✔ | 7LWU | 23557 | 2022-12-15 | 2021-03-01 | 3.22 | 3.45 | — | 3.4 | 0.013 | 1.76 | 3.0 | 0.09 | 12.68 | 0.01 | 2.528 | 0.15 | 0.94 | 5.5 | 94.3 | 0.2 | -0.75 | 0.74 | 0.83 | 3.14 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 14.07 | 0.00 | 2.179 | 5.01 | 0.08 | 3.3 | 96.7 | 0.0 | 0.64 | 1.24 | 0.75 | 0.86 | 2.87 | 23576 | 2980 | 6 | 0 | 35 | 0 | 0 | logfile |
✔ | 7THE | 25893 | 2022-12-11 | 2022-01-10 | 3.87 | 4.06 | 3.94 | 4.0 | 0.013 | 1.88 | 0.0 | 0.11 | 13.70 | 0.02 | 2.548 | 0.15 | 0.00 | 8.2 | 91.8 | 0.0 | -2.01 | 0.67 | 0.75 | 3.24 | 4.0 | 0.004 | 0.78 | 0.0 | 0.05 | 15.65 | 0.00 | 2.180 | 17.59 | 1.39 | 7.7 | 92.3 | 0.0 | -1.24 | 0.72 | 0.68 | 0.76 | 2.45 | 3305 | 423 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 7M71 | 23707 | 2022-12-11 | 2021-03-26 | 2.66 | 3.67 | 2.73 | 3.0 | 0.013 | 1.86 | 5.0 | 0.11 | 13.04 | 0.02 | 2.531 | 0.15 | 0.41 | 5.0 | 95.0 | 0.0 | -0.93 | 0.52 | 0.79 | 3.87 | 3.0 | 0.003 | 0.63 | 0.0 | 0.04 | 13.71 | 0.00 | 2.162 | 7.58 | 0.82 | 3.4 | 96.6 | 0.0 | -0.43 | 1.35 | 0.59 | 0.90 | 3.76 | 6646 | 852 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 7LWo | 23552 | 2022-12-15 | 2021-03-01 | 2.85 | 3.02 | — | 3.0 | 0.013 | 1.78 | 6.0 | 0.09 | 12.61 | 0.01 | 2.511 | 0.15 | 0.59 | 4.5 | 95.1 | 0.3 | -0.78 | 0.72 | 0.80 | 3.55 | 3.0 | 0.003 | 0.58 | 0.0 | 0.04 | 15.12 | 0.00 | 2.080 | 4.59 | 1.85 | 2.6 | 97.2 | 0.1 | 0.67 | 0.61 | 0.68 | 0.82 | 3.21 | 23556 | 2980 | 9 | 0 | 36 | 0 | 0 | logfile |
✔ | 7LYM | 23595 | 2022-12-15 | 2021-03-07 | 3.57 | 3.82 | — | 3.7 | 0.013 | 1.73 | 2.0 | 0.09 | 13.00 | 0.01 | 2.536 | 0.15 | 0.84 | 5.3 | 94.4 | 0.4 | -1.08 | 0.80 | 0.83 | 2.78 | 3.7 | 0.003 | 0.60 | 0.0 | 0.04 | 14.36 | 0.00 | 2.122 | 5.78 | 0.11 | 3.3 | 96.7 | 0.0 | 0.46 | 0.66 | 0.80 | 0.83 | 2.11 | 23916 | 3006 | 6 | 0 | 33 | 0 | 0 | logfile |
✔ | 7LWW | 23559 | 2022-12-15 | 2021-03-01 | 3.0 | 3.20 | — | 3.2 | 0.013 | 1.78 | 5.0 | 0.10 | 12.62 | 0.01 | 2.511 | 0.15 | 0.55 | 5.3 | 94.4 | 0.3 | -0.82 | 0.75 | 0.84 | 3.87 | 3.2 | 0.004 | 0.62 | 0.0 | 0.04 | 14.79 | 0.00 | 2.170 | 5.63 | 1.81 | 3.3 | 96.7 | 0.0 | 0.50 | 0.63 | 0.78 | 0.85 | 3.08 | 23786 | 2982 | 18 | 0 | 50 | 0 | 0 | logfile |
✔ | 7N5F | 24188 | 2022-12-11 | 2021-06-05 | 2.7 | 2.27 | 2.74 | 2.0 | 0.023 | 1.50 | 0.0 | 0.10 | 9.99 | 0.01 | 2.468 | 0.16 | 0.00 | 1.3 | 98.7 | 0.0 | 1.68 | 0.36 | 0.75 | 3.32 | 1.7 | 0.003 | 0.56 | 0.0 | 0.04 | 17.43 | 0.00 | 2.324 | 7.74 | 0.95 | 1.3 | 98.7 | 0.0 | 2.60 | 0.79 | 0.36 | 0.78 | 3.26 | 3037 | 386 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7LWT | 23556 | 2022-12-15 | 2021-03-01 | 3.19 | 3.41 | — | 3.4 | 0.013 | 1.78 | 1.0 | 0.10 | 12.52 | 0.01 | 2.527 | 0.17 | 0.90 | 5.1 | 94.6 | 0.3 | -0.82 | 0.76 | 0.84 | 3.87 | 3.4 | 0.002 | 0.55 | 0.0 | 0.04 | 14.16 | 0.00 | 2.191 | 4.61 | 0.35 | 2.9 | 97.1 | 0.1 | 0.72 | 1.24 | 0.77 | 0.83 | 2.91 | 23759 | 2980 | 15 | 0 | 48 | 0 | 0 | logfile |
✔ | 7NCJ | 12268 | 2022-12-12 | 2021-01-28 | 4.23 | 3.11 | 3.97 | 4.5 | 0.011 | 1.60 | 2.0 | 0.10 | 13.68 | 0.01 | 2.444 | 0.18 | 0.76 | 7.7 | 92.0 | 0.3 | -2.36 | 0.65 | 0.46 | — | 4.5 | 0.003 | 0.61 | 1.0 | 0.05 | 14.19 | 0.00 | 1.945 | 15.31 | 0.00 | 10.3 | 89.7 | 0.0 | -2.78 | 1.36 | 0.70 | 0.58 | — | 10860 | 774 | 12 | 0 | 0 | 0 | 5586 | logfile |
✔ | 7ToV | 26039 | 2022-12-15 | 2022-01-24 | 3.16 | 3.39 | — | 3.2 | 0.013 | 1.79 | 5.0 | 0.09 | 12.54 | 0.01 | 2.515 | 0.18 | 0.89 | 5.8 | 93.7 | 0.4 | -0.81 | 0.83 | 0.86 | 4.13 | 3.2 | 0.002 | 0.58 | 0.0 | 0.04 | 13.29 | 0.00 | 2.094 | 4.43 | 0.17 | 3.9 | 96.0 | 0.1 | 0.35 | 0.51 | 0.85 | 0.88 | 3.38 | 23199 | 2983 | 18 | 0 | 58 | 0 | 0 | logfile |
✔ | 7TP8 | 26048 | 2022-12-15 | 2022-01-25 | 3.4 | 3.77 | — | 3.4 | 0.013 | 1.75 | 6.0 | 0.09 | 12.89 | 0.01 | 2.519 | 0.18 | 0.98 | 6.3 | 92.8 | 0.9 | -0.98 | 0.84 | 0.85 | 4.23 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 13.49 | 0.00 | 2.230 | 3.96 | 0.09 | 4.4 | 95.5 | 0.1 | 0.26 | 1.61 | 0.85 | 0.87 | 2.86 | 23199 | 2983 | 18 | 0 | 58 | 0 | 0 | logfile |
✔ | 7KDL | 22826 | 2022-12-14 | 2020-10-08 | 2.96 | 3.49 | — | 3.4 | 0.013 | 1.75 | 2.0 | 0.10 | 12.25 | 0.01 | 1.479 | 0.18 | 0.27 | 6.1 | 93.6 | 0.3 | -0.99 | 0.78 | 0.78 | 3.84 | 3.4 | 0.003 | 0.61 | 0.0 | 0.04 | 14.19 | 0.00 | 2.142 | 6.76 | 1.42 | 3.4 | 96.6 | 0.0 | 0.33 | 1.22 | 0.79 | 0.82 | 3.35 | 22365 | 2875 | 18 | 0 | 59 | 0 | 0 | logfile |
✔ | 7TJZ | 25947 | 2022-12-14 | 2022-01-17 | 4.4 | 7.00 | 4.54 | 4.2 | 0.019 | 2.21 | 0.0 | 0.00 | 6.67 | 0.01 | 2.384 | 0.19 | 0.00 | 4.2 | 94.2 | 1.6 | -0.41 | 0.58 | 0.63 | — | 4.3 | 0.012 | 0.93 | 0.0 | 0.00 | 5.55 | 0.00 | 2.081 | 10.56 | 0.00 | 10.4 | 89.3 | 0.3 | 0.17 | 0.73 | 0.79 | 0.83 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |