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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7Ji0 | 22341 | 2023-09-27 | 2020-07-21 | 2.95 | 3.30 | 3.08 | 3.2 | 0.003 | 0.48 | 0.0 | 0.04 | 12.97 | 0.00 | 2.233 | 3.94 | 5.91 | 4.5 | 95.5 | 0.0 | -3.04 | 0.73 | 0.84 | 4.32 | 3.2 | 0.002 | 0.47 | 0.0 | 0.04 | 15.32 | 0.00 | 2.210 | 3.66 | 2.96 | 3.8 | 96.2 | 0.0 | 1.47 | 0.45 | 0.70 | 0.83 | 3.46 | 3556 | 432 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8E4N | 27893 | 2023-09-27 | 2022-08-18 | 3.07 | 3.58 | 3.04 | 3.3 | 0.003 | 0.47 | 0.0 | 0.04 | 11.07 | 0.01 | 2.123 | 8.01 | 0.00 | 1.8 | 98.2 | 0.0 | 3.01 | 0.70 | 0.79 | 2.72 | 3.3 | 0.003 | 0.68 | 0.0 | 0.03 | 13.61 | 0.00 | 2.129 | 8.20 | 0.46 | 3.0 | 97.0 | 0.1 | 2.62 | 0.69 | 0.70 | 0.79 | 2.64 | 52736 | 3604 | 8 | 0 | 4 | 0 | 25460 | logfile |
✔ | 8HDS | 34679 | 2023-09-27 | 2022-11-06 | 3.57 | 3.28 | 3.59 | 3.4 | 0.007 | 1.11 | 0.0 | 0.06 | 10.70 | 0.01 | 2.312 | 4.13 | 0.63 | 10.9 | 89.1 | 0.0 | -6.20 | 0.55 | 0.77 | 2.49 | 3.4 | 0.004 | 0.71 | 0.0 | 0.04 | 16.09 | 0.00 | 2.083 | 10.70 | 0.96 | 9.7 | 90.3 | 0.0 | -2.59 | 1.26 | 0.56 | 0.78 | 1.67 | 53532 | 6864 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N5F | 24188 | 2023-09-27 | 2021-06-05 | 2.7 | 2.27 | 2.74 | 2.0 | 0.023 | 1.50 | 0.0 | 0.10 | 9.99 | 0.01 | 2.468 | 0.16 | 0.00 | 1.3 | 98.7 | 0.0 | 1.68 | 0.36 | 0.75 | 3.32 | 1.7 | 0.003 | 0.57 | 0.0 | 0.04 | 17.55 | 0.00 | 2.307 | 7.74 | 1.59 | 1.6 | 98.4 | 0.0 | 2.51 | 0.79 | 0.36 | 0.78 | 3.13 | 3037 | 386 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7Y7Y | 33674 | 2023-09-27 | 2022-06-22 | 2.4 | 2.62 | 2.37 | 2.6 | 0.006 | 0.73 | 0.0 | 0.07 | 17.14 | 0.00 | 1.789 | 6.02 | 0.45 | 3.0 | 97.0 | 0.0 | 0.29 | 0.72 | 0.87 | 3.50 | 2.6 | 0.003 | 0.57 | 0.0 | 0.04 | 16.60 | 0.00 | 2.148 | 6.02 | 2.68 | 1.7 | 98.3 | 0.0 | 0.96 | 0.41 | 0.71 | 0.88 | 3.46 | 4303 | 527 | 1 | 0 | 7 | 54 | 0 | logfile |
✔ | 7KU5 | 23034 | 2023-09-27 | 2020-11-24 | 3.76 | 3.63 | — | 3.9 | 0.006 | 1.29 | 0.0 | 0.07 | 14.85 | 0.01 | 2.420 | 3.63 | 0.00 | 12.8 | 87.2 | 0.0 | -5.41 | 0.23 | 0.65 | -0.48 | 3.9 | 0.002 | 0.72 | 0.0 | 0.04 | 15.66 | 0.01 | 2.252 | 10.89 | 0.00 | 9.3 | 90.7 | 0.0 | -1.34 | 1.18 | 0.24 | 0.69 | 2.46 | 750 | 88 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 8DT3 | 27690 | 2023-09-27 | 2022-07-25 | 3.3 | 3.99 | 3.55 | 3.7 | 0.004 | 0.67 | 0.0 | 0.04 | 13.45 | 0.00 | 2.125 | 10.67 | 0.00 | 8.2 | 91.8 | 0.0 | -0.65 | 0.78 | 0.83 | 2.90 | 3.7 | 0.004 | 0.66 | 0.0 | 0.05 | 15.28 | 0.00 | 2.083 | 12.94 | 0.00 | 8.0 | 92.0 | 0.0 | -0.49 | 0.39 | 0.79 | 0.85 | 2.73 | 3821 | 485 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 8EFP | 28087 | 2023-09-27 | 2022-09-08 | 3.8 | 4.73 | 3.90 | 4.0 | 0.006 | 1.46 | 7.0 | 0.09 | 18.61 | 0.01 | 1.908 | 33.65 | 3.07 | 13.3 | 86.7 | 0.0 | -4.26 | 0.82 | 0.62 | -0.42 | 4.0 | 0.003 | 0.86 | 0.0 | 0.04 | 18.75 | 0.00 | 2.083 | 23.79 | 0.38 | 9.6 | 90.4 | 0.0 | -2.53 | 0.88 | 0.84 | 0.73 | -0.29 | 4705 | 594 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Y97 | 10733 | 2023-09-27 | 2020-03-06 | 4.33 | 4.65 | — | 4.5 | 0.002 | 0.58 | 0.0 | 0.04 | 14.61 | 0.00 | 2.147 | 7.17 | 0.00 | 5.2 | 94.8 | 0.0 | 1.11 | 0.69 | 0.62 | — | 4.5 | 0.003 | 0.70 | 0.0 | 0.04 | 13.33 | 0.00 | 2.077 | 12.75 | 0.00 | 7.2 | 92.8 | 0.0 | 0.76 | 1.20 | 0.71 | 0.71 | — | 4366 | 564 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6X2Z | 22014 | 2023-09-27 | 2020-05-21 | 3.03 | 3.18 | — | 3.2 | 0.005 | 0.84 | 0.0 | 0.05 | 15.51 | 0.01 | 2.131 | 6.52 | 0.00 | 3.6 | 96.4 | 0.0 | -5.65 | 0.44 | 0.86 | 2.63 | 3.2 | 0.003 | 0.67 | 0.0 | 0.04 | 16.15 | 0.00 | 2.195 | 9.40 | 0.28 | 2.9 | 97.1 | 0.0 | 0.74 | 0.96 | 0.44 | 0.87 | 2.26 | 3205 | 420 | 1 | 0 | 3 | 0 | 0 | logfile |
✔ | 3JBS | 6478 | 2023-09-27 | 2015-10-13 | 2.9 | 3.04 | — | 3.2 | 0.010 | 1.32 | 0.0 | 0.06 | 8.67 | 0.01 | 2.510 | 0.00 | 0.00 | 2.9 | 97.1 | 0.0 | 0.51 | 0.21 | 0.76 | 4.15 | 3.0 | 0.003 | 0.61 | 0.0 | 0.04 | 18.11 | 0.00 | 2.225 | 5.17 | 3.95 | 1.7 | 98.3 | 0.0 | 0.99 | 1.75 | 0.21 | 0.81 | 3.63 | 1401 | 175 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YNi | 33962 | 2023-09-27 | 2022-07-31 | 3.26 | 3.56 | 3.00 | 3.6 | 0.005 | 0.66 | 0.0 | 0.04 | 10.99 | 0.01 | 2.206 | 19.26 | 0.00 | 5.0 | 94.5 | 0.5 | 0.78 | 0.44 | 0.69 | 1.96 | 3.6 | 0.004 | 0.68 | 0.0 | 0.04 | 13.96 | 0.01 | 2.229 | 12.72 | 0.00 | 4.8 | 94.8 | 0.3 | 1.03 | 0.93 | 0.49 | 0.73 | 1.44 | 4387 | 594 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 7UUZ | 26807 | 2023-09-27 | 2022-04-29 | 3.2 | 3.25 | 1.51 | 3.2 | 0.006 | 0.57 | 0.0 | 0.04 | 13.36 | 0.00 | 2.186 | 5.97 | 0.51 | 5.9 | 94.1 | 0.0 | 1.14 | 0.62 | 0.78 | 2.69 | 3.2 | 0.004 | 0.65 | 0.0 | 0.04 | 15.14 | 0.00 | 2.210 | 10.00 | 0.25 | 5.5 | 94.5 | 0.0 | 1.03 | 1.12 | 0.60 | 0.79 | 2.16 | 3786 | 501 | 1 | 0 | 3 | 0 | 0 | logfile |
✔ | 8CSY | 26975 | 2023-09-27 | 2022-05-13 | 2.7 | 2.51 | 2.69 | 2.6 | 0.003 | 0.56 | 0.0 | 0.04 | 14.36 | 0.00 | 2.224 | 4.67 | 4.06 | 1.6 | 98.4 | 0.0 | 1.07 | 0.63 | 0.86 | 4.96 | 2.6 | 0.003 | 0.54 | 0.0 | 0.04 | 17.50 | 0.00 | 2.137 | 6.84 | 2.03 | 1.6 | 98.4 | 0.0 | 1.15 | 0.81 | 0.63 | 0.87 | 4.32 | 4638 | 584 | 4 | 0 | 0 | 19 | 0 | logfile |
✔ | 7CKR | 30391 | 2023-09-27 | 2020-07-18 | 3.0 | 3.32 | — | 3.4 | 0.009 | 1.22 | 9.0 | 0.09 | 17.22 | 0.01 | 1.896 | 18.09 | 11.04 | 8.0 | 91.9 | 0.2 | -2.89 | 0.45 | 0.60 | 2.22 | 3.3 | 0.003 | 0.78 | 0.0 | 0.05 | 17.05 | 0.01 | 2.178 | 14.60 | 3.58 | 4.1 | 95.9 | 0.0 | 0.75 | 1.85 | 0.53 | 0.73 | 1.92 | 4094 | 597 | 3 | 0 | 1 | 0 | 0 | logfile |
✘ | 8DLY | 27520 | 2023-09-27 | 2022-07-08 | 3.0 | 3.63 | 2.92 | 3.6 | 0.005 | 0.94 | 0.0 | 0.06 | 12.37 | 0.01 | 2.317 | 1.86 | 0.37 | 3.5 | 96.5 | 0.0 | -1.46 | 0.63 | 0.81 | 3.36 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 2483 | 314 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 7CKo | 30389 | 2023-09-27 | 2020-07-18 | 2.95 | 3.28 | — | 3.3 | 0.012 | 1.32 | 10.0 | 0.13 | 16.64 | 0.01 | 1.964 | 11.96 | 12.88 | 9.1 | 90.8 | 0.2 | -2.69 | 0.47 | 0.62 | 2.15 | 3.3 | 0.004 | 0.84 | 0.0 | 0.04 | 16.28 | 0.01 | 2.084 | 9.99 | 4.29 | 5.0 | 95.0 | 0.0 | -0.14 | 2.24 | 0.47 | 0.70 | 1.77 | 4029 | 591 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 7UAQ | 26430 | 2023-09-27 | 2022-03-13 | 3.1 | 3.91 | 2.90 | 3.7 | 0.006 | 1.19 | 2.0 | 0.07 | 12.79 | 0.01 | 2.101 | 25.20 | 0.22 | 11.5 | 88.5 | 0.0 | -2.56 | 0.57 | 0.74 | 2.32 | 3.7 | 0.004 | 0.86 | 0.0 | 0.05 | 15.30 | 0.01 | 2.192 | 16.76 | 0.65 | 10.3 | 89.7 | 0.0 | -2.20 | 1.27 | 0.57 | 0.78 | 2.09 | 4362 | 533 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 7DA5 | 30623 | 2023-09-27 | 2020-10-14 | 3.3 | 3.66 | — | 3.8 | 0.008 | 1.21 | 10.0 | 0.09 | 16.47 | 0.01 | 1.673 | 16.04 | 10.06 | 9.1 | 90.6 | 0.3 | -3.63 | 0.43 | 0.58 | 1.81 | 3.7 | 0.004 | 0.78 | 0.0 | 0.04 | 16.11 | 0.00 | 2.233 | 8.41 | 0.91 | 5.1 | 94.9 | 0.0 | 0.00 | 1.49 | 0.49 | 0.71 | 2.09 | 4013 | 591 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8HND | 34911 | 2023-09-27 | 2022-12-07 | 3.19 | 3.62 | 3.32 | 3.6 | 0.008 | 1.22 | 4.0 | 0.07 | 12.21 | 0.02 | 2.231 | 14.77 | 0.65 | 4.5 | 95.5 | 0.0 | -2.74 | 0.50 | 0.73 | 2.07 | 3.6 | 0.004 | 0.63 | 0.0 | 0.04 | 14.97 | 0.00 | 2.206 | 7.90 | 0.00 | 3.6 | 96.4 | 0.0 | 1.02 | 1.07 | 0.44 | 0.69 | 1.97 | 4370 | 560 | 3 | 0 | 4 | 0 | 0 | logfile |