The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7MVU | 24056 | 2022-12-15 | 2021-05-15 | 3.77 | 4.87 | 3.73 | 4.0 | 0.002 | 0.36 | 0.0 | 0.03 | 6.38 | 0.00 | 2.187 | 3.55 | 0.00 | 1.1 | 98.9 | 0.0 | -0.33 | 0.85 | 0.73 | 0.19 | 4.1 | 0.002 | 0.58 | 0.0 | 0.03 | 11.85 | 0.00 | 1.937 | 10.96 | 0.22 | 2.9 | 97.1 | 0.0 | 2.75 | 2.06 | 0.88 | 0.82 | 0.36 | 25645 | 1604 | 2 | 0 | 0 | 0 | 12841 | logfile |
✔ | 7Z8L | 14556 | 2022-12-13 | 2022-03-17 | 4.9 | 4.50 | 4.38 | 4.0 | 0.012 | 1.30 | 0.0 | 0.09 | 6.41 | 0.01 | 2.296 | 0.29 | 0.00 | 1.2 | 98.8 | 0.0 | 1.37 | 0.76 | 0.77 | — | 4.0 | 0.003 | 0.57 | 0.0 | 0.04 | 6.17 | 0.00 | 1.902 | 4.71 | 0.00 | 3.8 | 96.2 | 0.0 | 2.16 | 0.60 | 0.84 | 0.80 | — | 16513 | 3311 | 3 | 0 | 5 | 0 | 0 | logfile |
✔ | 7MVV | 24057 | 2022-12-15 | 2021-05-15 | 3.22 | 4.20 | 3.24 | 3.5 | 0.002 | 0.36 | 0.0 | 0.03 | 6.43 | 0.00 | 2.161 | 3.07 | 0.07 | 1.3 | 98.7 | 0.0 | -0.66 | 0.88 | 0.76 | 0.50 | 3.6 | 0.003 | 0.52 | 0.0 | 0.03 | 11.12 | 0.00 | 2.027 | 7.30 | 0.07 | 3.4 | 96.6 | 0.0 | 2.79 | 0.96 | 0.90 | 0.83 | 1.13 | 25764 | 1609 | 4 | 0 | 0 | 0 | 12907 | logfile |
✔ | 7WD8 | 32434 | 2022-12-11 | 2021-12-21 | 4.3 | 3.48 | — | 3.5 | 0.002 | 0.51 | 0.0 | 0.04 | 6.43 | 0.00 | 2.246 | 9.18 | 0.00 | 4.1 | 95.7 | 0.2 | -0.96 | 0.60 | 0.61 | — | 3.4 | 0.005 | 0.82 | 0.0 | 0.05 | 12.56 | 0.01 | 2.093 | 19.99 | 0.00 | 7.2 | 92.6 | 0.2 | -0.59 | 1.67 | 0.64 | 0.68 | — | 4029 | 524 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6B19 | 7031 | 2022-12-11 | 2017-09-18 | 4.5 | 4.61 | — | 4.4 | 0.023 | 1.38 | 0.0 | 0.05 | 6.45 | 0.01 | 2.201 | 16.18 | 0.00 | 19.4 | 80.5 | 0.1 | -5.73 | 0.74 | 0.63 | — | 4.4 | 0.003 | 0.87 | 0.0 | 0.04 | 13.09 | 0.00 | 1.943 | 28.42 | 0.00 | 24.5 | 75.5 | 0.0 | -5.38 | 1.33 | 0.77 | 0.65 | — | 5699 | 907 | 4 | 38 | 0 | 0 | 409 | logfile |
✔ | 7JG6 | 22312 | 2022-12-14 | 2020-07-18 | 3.7 | 2.39 | 3.79 | 2.2 | 0.008 | 1.40 | 0.0 | 0.00 | 6.55 | 0.01 | 2.433 | 0.00 | 0.00 | 2.9 | 97.0 | 0.1 | -0.59 | 0.62 | 0.54 | — | 2.3 | 0.003 | 0.91 | 0.0 | 0.00 | 5.94 | 0.00 | 2.230 | 1.09 | 0.00 | 10.6 | 89.3 | 0.1 | -1.07 | 1.66 | 0.70 | 0.68 | — | 19320 | 4819 | 20 | 0 | 11 | 0 | 0 | logfile |
✔ | 7TK0 | 25948 | 2022-12-14 | 2022-01-17 | 4.4 | 6.63 | 4.39 | 4.1 | 0.019 | 2.21 | 0.0 | 0.00 | 6.55 | 0.01 | 2.394 | 0.08 | 0.00 | 3.9 | 94.5 | 1.5 | -0.40 | 0.58 | 0.62 | — | 4.1 | 0.004 | 0.83 | 0.0 | 0.00 | 5.40 | 0.00 | 2.153 | 9.44 | 0.00 | 10.9 | 88.8 | 0.3 | -0.57 | 0.81 | 0.83 | 0.81 | — | 20220 | 5054 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QPi | 4614 | 2022-12-11 | 2019-02-14 | 3.3 | 3.37 | 2.73 | 3.4 | 0.005 | 0.70 | 0.0 | 0.04 | 6.59 | 0.01 | 2.432 | 2.09 | 0.00 | 1.4 | 98.6 | 0.0 | -3.02 | 0.39 | 0.62 | — | 3.3 | 0.002 | 0.44 | 0.0 | 0.04 | 4.28 | 0.00 | 2.462 | 1.49 | 0.00 | 2.8 | 97.2 | 0.0 | 2.25 | 1.20 | 0.40 | 0.62 | — | 2288 | 462 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MVY | 24058 | 2022-12-15 | 2021-05-15 | 2.39 | 3.24 | 1.97 | 3.1 | 0.002 | 0.39 | 0.0 | 0.03 | 6.61 | 0.00 | 2.209 | 3.31 | 0.00 | 0.7 | 99.3 | 0.0 | -0.54 | 0.72 | 0.64 | 0.92 | 3.0 | 0.005 | 0.67 | 0.0 | 0.04 | 14.14 | 0.00 | 1.958 | 13.67 | 1.65 | 3.9 | 96.1 | 0.0 | 0.95 | 1.65 | 0.76 | 0.74 | 2.24 | 26555 | 1694 | 2 | 0 | 0 | 0 | 13337 | logfile |
✔ | 7TJZ | 25947 | 2022-12-14 | 2022-01-17 | 4.4 | 7.00 | 4.54 | 4.2 | 0.019 | 2.21 | 0.0 | 0.00 | 6.67 | 0.01 | 2.384 | 0.19 | 0.00 | 4.2 | 94.2 | 1.6 | -0.41 | 0.58 | 0.63 | — | 4.3 | 0.012 | 0.93 | 0.0 | 0.00 | 5.55 | 0.00 | 2.081 | 10.56 | 0.00 | 10.4 | 89.3 | 0.3 | 0.17 | 0.73 | 0.79 | 0.83 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TK8 | 25960 | 2022-12-14 | 2022-01-17 | 4.7 | 7.79 | 12.86 | 4.4 | 0.019 | 2.21 | 0.0 | 0.00 | 6.68 | 0.01 | 2.390 | 0.08 | 0.00 | 4.1 | 94.4 | 1.5 | -0.46 | 0.60 | 0.61 | — | 4.4 | 0.008 | 1.17 | 0.0 | 0.00 | 6.80 | 0.01 | 1.933 | 31.40 | 0.00 | 11.8 | 87.8 | 0.4 | -1.32 | 1.58 | 0.81 | 0.81 | — | 20227 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TKP | 25977 | 2022-12-14 | 2022-01-17 | 4.6 | 7.57 | 4.97 | 4.4 | 0.019 | 2.20 | 0.0 | 0.00 | 6.68 | 0.01 | 2.352 | 0.12 | 0.00 | 4.2 | 94.5 | 1.3 | -0.50 | 0.60 | 0.63 | — | 4.4 | 0.004 | 0.83 | 0.0 | 0.00 | 5.46 | 0.00 | 2.080 | 13.25 | 0.00 | 10.0 | 89.8 | 0.2 | 0.34 | 0.82 | 0.82 | 0.84 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 6YW7 | 10960 | 2022-12-11 | 2020-04-29 | 4.5 | 5.21 | — | 4.7 | 0.021 | 3.50 | 0.0 | 0.09 | 6.70 | 0.01 | 2.034 | 2.17 | 0.00 | 4.5 | 94.7 | 0.9 | -1.45 | 0.57 | 0.32 | — | 4.6 | 0.003 | 1.00 | 0.0 | 0.02 | 5.16 | 0.00 | 2.215 | 9.65 | 0.00 | 10.5 | 89.4 | 0.2 | -3.99 | 6.44 | 0.82 | 0.75 | — | 5426 | 1788 | 9 | 0 | 2 | 0 | 0 | logfile |
✔ | 4UQ8 | 2676 | 2022-12-16 | 2014-06-21 | 4.95 | 5.05 | 4.64 | 4.9 | 0.012 | 2.07 | 23.0 | 1.38 | 6.71 | 0.01 | 1.032 | 67.37 | 25.00 | 0.0 | 0.0 | 0.0 | — | 0.57 | 0.75 | — | 4.9 | 0.013 | 2.54 | 0.0 | 0.41 | 5.50 | 0.00 | 2.103 | 29.65 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.11 | 0.61 | 0.83 | — | 28647 | 33 | 54 | 0 | 5686 | 0 | 0 | logfile |
✔ | 7TKQ | 25978 | 2022-12-14 | 2022-01-17 | 4.5 | 7.57 | 4.53 | 4.3 | 0.019 | 2.21 | 0.0 | 0.00 | 6.72 | 0.01 | 2.371 | 0.08 | 0.00 | 4.0 | 94.5 | 1.5 | -0.48 | 0.59 | 0.61 | — | 4.3 | 0.006 | 0.92 | 0.0 | 0.00 | 6.22 | 0.00 | 2.038 | 17.45 | 0.00 | 11.2 | 88.5 | 0.3 | -0.53 | 0.80 | 0.82 | 0.83 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TKo | 25976 | 2022-12-14 | 2022-01-17 | 4.8 | 7.71 | 5.39 | 4.4 | 0.019 | 2.23 | 0.0 | 0.00 | 6.74 | 0.01 | 2.314 | 0.12 | 0.00 | 4.8 | 93.9 | 1.4 | -0.54 | 0.62 | 0.65 | — | 4.4 | 0.018 | 1.36 | 0.0 | 0.00 | 7.58 | 0.01 | 1.972 | 30.28 | 0.00 | 15.9 | 83.8 | 0.3 | -2.17 | 0.89 | 0.84 | 0.82 | — | 20229 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TJY | 25946 | 2022-12-14 | 2022-01-17 | 3.8 | 4.84 | 3.78 | 3.6 | 0.020 | 2.29 | 0.0 | 0.00 | 6.75 | 0.01 | 2.333 | 0.12 | 0.00 | 4.3 | 94.3 | 1.5 | -0.54 | 0.59 | 0.68 | — | 3.7 | 0.006 | 0.89 | 0.0 | 0.00 | 5.53 | 0.00 | 2.131 | 6.70 | 0.00 | 11.9 | 87.8 | 0.3 | -0.26 | 1.48 | 0.84 | 0.80 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TKM | 25974 | 2022-12-14 | 2022-01-17 | 4.5 | 7.58 | 4.88 | 4.3 | 0.019 | 2.22 | 0.0 | 0.00 | 6.78 | 0.01 | 2.385 | 0.12 | 0.00 | 4.3 | 94.2 | 1.5 | -0.44 | 0.59 | 0.59 | — | 4.3 | 0.005 | 0.90 | 0.0 | 0.00 | 6.11 | 0.00 | 2.052 | 17.76 | 0.00 | 11.5 | 88.1 | 0.4 | -1.22 | 1.55 | 0.83 | 0.81 | — | 20227 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RAK | 24363 | 2022-12-12 | 2021-07-01 | 3.9 | 4.13 | — | 4.1 | 0.003 | 0.61 | 0.0 | 0.04 | 6.78 | 0.00 | 2.283 | 4.32 | 0.00 | 14.0 | 85.0 | 1.0 | -3.87 | 0.62 | 0.61 | 0.78 | 4.1 | 0.002 | 0.64 | 0.0 | 0.04 | 12.11 | 0.00 | 2.204 | 7.78 | 0.31 | 4.5 | 95.3 | 0.2 | -1.54 | 1.71 | 0.67 | 0.71 | 0.55 | 61296 | 8112 | 32 | 0 | 16 | 0 | 0 | logfile |
✘ | 6PM5 | 20388 | 2022-12-18 | 2019-07-01 | 3.1 | 3.38 | — | 3.4 | 0.001 | 0.42 | 0.0 | 0.06 | 6.80 | 0.00 | 2.275 | 5.10 | 0.00 | 2.4 | 97.6 | 0.0 | -4.42 | 0.52 | 0.78 | 3.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13975 | 1735 | 15 | 0 | 15 | 0 | 0 | logfile |