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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6GZ4 | 0099 | 2022-04-24 | 2018-07-03 | 3.6 | 3.89 | — | 3.6 | 0.004 | 0.81 | 0.0 | 0.04 | 14.04 | 0.01 | 1.337 | 5.56 | 0.22 | 8.9 | 90.9 | 0.2 | -3.81 | 0.80 | 0.74 | 1.83 | 3.6 | 0.008 | 0.80 | 0.0 | 0.04 | 16.38 | 0.01 | 1.069 | 18.41 | 1.17 | 10.7 | 89.1 | 0.2 | -1.55 | 1.28 | 0.86 | 0.86 | 1.58 | 225601 | 12699 | 103 | 5759 | 333 | 0 | 0 | logfile |
✔ | 6GZ5 | 0100 | 2022-04-24 | 2018-07-03 | 3.5 | 3.86 | — | 3.6 | 0.003 | 0.79 | 0.0 | 0.04 | 13.93 | 0.01 | 1.375 | 5.29 | 0.15 | 8.6 | 91.2 | 0.2 | -3.79 | 0.79 | 0.72 | 1.70 | 3.6 | 0.004 | 0.67 | 0.0 | 0.04 | 16.14 | 0.01 | 1.200 | 14.88 | 0.76 | 9.4 | 90.5 | 0.1 | -1.17 | 0.84 | 0.84 | 0.85 | 1.55 | 225601 | 12699 | 105 | 5759 | 333 | 0 | 0 | logfile |
✔ | 6GZQ | 0101 | 2022-04-10 | 2018-07-04 | 3.28 | 3.72 | — | 3.6 | 0.017 | 1.33 | 0.0 | 0.06 | 17.34 | 0.01 | 1.769 | 5.57 | 0.58 | 15.1 | 84.4 | 0.5 | -5.41 | 0.79 | 0.83 | 2.31 | 3.6 | 0.008 | 0.92 | 2.0 | 0.04 | 17.66 | 0.01 | 1.216 | 14.78 | 1.05 | 13.8 | 86.0 | 0.2 | -3.86 | 0.62 | 0.79 | 0.83 | 1.64 | 144138 | 5820 | 53 | 4540 | 0 | 0 | 0 | logfile |
✔ | 6H05 | 0108 | 2022-04-09 | 2018-07-06 | 2.9 | 3.15 | — | 3.5 | 0.016 | 1.09 | 0.0 | 0.07 | 9.74 | 0.01 | 0.426 | 17.80 | 0.00 | 8.5 | 91.5 | 0.0 | -5.50 | 0.36 | 0.13 | 0.50 | 3.1 | 0.007 | 1.02 | 0.0 | 0.05 | 15.81 | 0.01 | 1.535 | 23.01 | 2.30 | 5.2 | 94.8 | 0.0 | -1.96 | 1.64 | 0.58 | 0.48 | 0.74 | 44544 | 5664 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6H25 | 0128 | 2022-04-06 | 2018-07-13 | 3.8 | 3.89 | — | 3.9 | 0.006 | 1.10 | 1.0 | 0.06 | 10.98 | 0.01 | 1.101 | 12.90 | 1.51 | 5.7 | 93.9 | 0.4 | -2.77 | 0.49 | 0.63 | 1.51 | 3.9 | 0.003 | 0.72 | 0.0 | 0.04 | 15.89 | 0.00 | 2.110 | 9.76 | 0.49 | 5.1 | 94.9 | 0.0 | -0.02 | 1.58 | 0.69 | 0.81 | 1.47 | 22138 | 2971 | 12 | 6 | 0 | 0 | 0 | logfile |
✔ | 6H3C | 0132 | 2022-04-09 | 2018-07-18 | 3.9 | 3.99 | 3.83 | 3.9 | 0.020 | 1.86 | 0.0 | 0.10 | 10.54 | 0.01 | 1.965 | 1.76 | 0.00 | 5.3 | 94.2 | 0.4 | -0.37 | 0.73 | 0.68 | 1.52 | 3.9 | 0.006 | 0.89 | 0.0 | 0.04 | 14.65 | 0.00 | 1.714 | 14.79 | 0.36 | 7.1 | 92.5 | 0.4 | -0.84 | 1.02 | 0.75 | 0.71 | 1.80 | 49982 | 3146 | 14 | 0 | 2 | 2 | 24860 | logfile |
✔ | 6H3i | 0133 | 2022-04-06 | 2018-07-18 | 3.5 | 3.59 | — | 3.5 | 0.009 | 0.92 | 0.0 | 0.05 | 10.08 | 0.01 | 2.012 | 39.59 | 0.40 | 21.4 | 78.4 | 0.2 | -5.64 | 0.78 | 0.86 | 4.47 | 3.5 | 0.010 | 0.93 | 1.0 | 0.04 | 13.26 | 0.00 | 2.010 | 52.80 | 0.00 | 21.1 | 78.8 | 0.1 | -4.42 | 2.52 | 0.78 | 0.87 | 3.45 | 20599 | 2597 | 3 | 0 | 0 | 0 | 53 | logfile |
✔ | 6H3J | 0134 | 2022-04-06 | 2018-07-18 | 3.7 | 3.83 | — | 3.7 | 0.007 | 0.87 | 0.0 | 0.05 | 10.17 | 0.00 | 2.025 | 43.38 | 0.05 | 23.8 | 76.2 | 0.0 | -6.63 | 0.77 | 0.85 | 3.89 | 3.7 | 0.005 | 0.65 | 0.0 | 0.04 | 13.39 | 0.00 | 1.860 | 56.20 | 0.32 | 21.3 | 78.7 | 0.0 | -4.95 | 2.68 | 0.78 | 0.86 | 2.86 | 20301 | 2511 | 3 | 0 | 0 | 0 | 212 | logfile |
✔ | 6H3L | 0135 | 2022-04-07 | 2018-07-19 | 4.2 | 4.88 | — | 3.9 | 0.015 | 1.70 | 0.0 | 0.08 | 11.55 | 0.01 | 2.124 | 5.25 | 0.06 | 7.7 | 91.4 | 0.9 | -1.43 | 0.92 | 0.69 | — | 3.7 | 0.005 | 0.73 | 0.0 | 0.04 | 13.32 | 0.01 | 1.925 | 24.22 | 0.00 | 10.2 | 89.6 | 0.2 | -2.30 | 1.35 | 0.91 | 0.77 | — | 29319 | 1881 | 3 | 0 | 0 | 0 | 14388 | logfile |
✔ | 6H3N | 0136 | 2022-04-07 | 2018-07-19 | 3.25 | 3.45 | — | 3.4 | 0.015 | 1.52 | 0.0 | 0.07 | 10.78 | 0.01 | 2.457 | 1.67 | 0.00 | 4.7 | 94.6 | 0.7 | -0.43 | 0.77 | 0.79 | 4.55 | 3.4 | 0.004 | 0.60 | 0.0 | 0.04 | 14.73 | 0.00 | 2.076 | 6.35 | 0.06 | 5.7 | 94.3 | 0.0 | -0.21 | 1.46 | 0.72 | 0.77 | 4.06 | 29319 | 1881 | 3 | 0 | 0 | 0 | 14388 | logfile |
✔ | 6H4N | 0137 | 2022-04-11 | 2018-07-22 | 3.0 | 3.20 | — | 3.1 | 0.007 | 0.96 | 4.0 | 0.05 | 14.51 | 0.01 | 0.418 | 5.98 | 0.74 | 10.1 | 89.4 | 0.5 | -4.18 | 0.86 | 0.87 | 3.31 | 3.1 | 0.005 | 0.68 | 0.0 | 0.04 | 15.38 | 0.01 | 2.017 | 11.69 | 3.71 | 9.9 | 89.9 | 0.1 | -1.42 | 1.21 | 0.87 | 0.90 | 2.47 | 147282 | 6188 | 57 | 4636 | 0 | 0 | 0 | logfile |
✔ | 6H5i | 0140 | 2022-04-04 | 2018-07-24 | 3.9 | 3.87 | — | 23.0 | 0.006 | 0.81 | 0.0 | 0.05 | 10.47 | 0.01 | 2.196 | 2.63 | 0.17 | 4.3 | 95.7 | 0.0 | -1.74 | 0.29 | 0.06 | 0.15 | 3.8 | 0.005 | 0.83 | 0.0 | 0.04 | 15.12 | 0.01 | 1.992 | 18.13 | 0.63 | 4.7 | 95.3 | 0.0 | 0.75 | 1.92 | 0.38 | 0.26 | 0.19 | 43900 | 5392 | 26 | 0 | 0 | 0 | 0 | logfile |
✔ | 6H5Q | 0141 | 2022-04-09 | 2018-07-25 | 3.3 | 3.43 | — | 3.4 | 0.010 | 1.14 | 0.0 | 0.06 | 11.79 | 0.01 | 1.628 | 11.72 | 1.54 | 4.0 | 96.0 | 0.0 | -4.31 | 0.46 | 0.87 | 4.00 | 3.4 | 0.004 | 0.69 | 0.0 | 0.04 | 15.04 | 0.01 | 2.102 | 11.14 | 0.70 | 3.8 | 96.2 | 0.0 | 0.34 | 0.62 | 0.49 | 0.89 | 2.74 | 46650 | 5715 | 30 | 90 | 0 | 0 | 0 | logfile |
✔ | 6H5S | 0142 | 2022-04-09 | 2018-07-25 | 3.3 | 3.45 | — | 3.4 | 0.010 | 1.12 | 0.0 | 0.06 | 10.77 | 0.01 | 1.817 | 7.18 | 0.65 | 7.3 | 92.7 | 0.0 | -5.39 | 0.51 | 0.88 | 4.96 | 3.4 | 0.004 | 0.63 | 0.0 | 0.04 | 14.96 | 0.00 | 2.120 | 8.94 | 0.19 | 3.6 | 96.4 | 0.0 | -0.19 | 0.63 | 0.53 | 0.90 | 3.43 | 44700 | 5445 | 30 | 90 | 0 | 0 | 0 | logfile |
✔ | 6H61 | 0143 | 2022-04-05 | 2018-07-25 | 4.02 | 4.20 | 3.87 | 4.0 | 0.007 | 0.84 | 0.0 | 0.05 | 9.67 | 0.00 | 2.107 | 14.74 | 0.18 | 9.5 | 90.5 | 0.0 | -2.98 | 0.62 | 0.78 | — | 4.0 | 0.002 | 0.57 | 0.0 | 0.04 | 12.00 | 0.00 | 2.087 | 22.42 | 0.00 | 6.1 | 93.9 | 0.0 | 0.63 | 1.83 | 0.63 | 0.77 | — | 9912 | 660 | 4 | 30 | 1 | 0 | 4057 | logfile |
✔ | 6H66 | 0145 | 2022-04-05 | 2018-07-26 | 4.16 | 4.23 | 3.99 | 4.2 | 0.008 | 0.88 | 0.0 | 0.05 | 9.41 | 0.01 | 2.070 | 15.41 | 0.17 | 10.4 | 89.4 | 0.2 | -3.09 | 0.61 | 0.76 | — | 4.2 | 0.002 | 0.63 | 0.0 | 0.04 | 11.99 | 0.00 | 2.063 | 21.55 | 0.00 | 7.8 | 92.2 | 0.0 | 0.56 | 1.86 | 0.62 | 0.77 | — | 10017 | 667 | 4 | 30 | 1 | 0 | 4120 | logfile |
✔ | 6H67 | 0146 | 2022-04-08 | 2018-07-26 | 3.6 | 3.68 | — | 3.6 | 0.006 | 0.87 | 0.0 | 0.06 | 10.79 | 0.01 | 2.050 | 5.44 | 0.05 | 7.5 | 92.5 | 0.0 | -4.14 | 0.68 | 0.72 | 2.07 | 3.6 | 0.003 | 0.65 | 0.0 | 0.04 | 15.72 | 0.00 | 1.943 | 11.56 | 0.44 | 5.2 | 94.8 | 0.0 | -1.35 | 3.27 | 0.69 | 0.74 | 1.35 | 33803 | 4140 | 22 | 43 | 7 | 0 | 0 | logfile |
✔ | 6H68 | 0147 | 2022-04-08 | 2018-07-26 | 4.6 | 4.70 | — | 4.6 | 0.005 | 0.84 | 0.0 | 0.05 | 11.37 | 0.01 | 2.243 | 6.66 | 0.05 | 7.3 | 92.7 | 0.0 | -3.73 | 0.72 | 0.68 | — | 4.6 | 0.003 | 0.70 | 0.0 | 0.04 | 14.07 | 0.00 | 1.979 | 15.93 | 0.00 | 5.9 | 94.1 | 0.0 | -1.08 | 1.47 | 0.74 | 0.72 | — | 37103 | 4497 | 22 | 67 | 6 | 0 | 0 | logfile |
✔ | 6H6B | 0148 | 2022-04-04 | 2018-07-26 | 3.4 | 3.13 | — | 3.5 | 0.008 | 1.10 | 0.0 | 0.20 | 8.13 | 0.00 | 2.530 | 5.82 | 0.00 | 14.3 | 85.7 | 0.0 | -4.80 | 0.44 | 0.74 | 5.60 | 3.2 | 0.005 | 0.91 | 0.0 | 0.18 | 11.69 | 0.00 | 2.137 | 6.56 | 0.50 | 19.6 | 80.4 | 0.0 | -4.04 | 1.83 | 0.42 | 0.78 | 3.27 | 8060 | 580 | 10 | 0 | 0 | 0 | 4100 | logfile |
✔ | 6H6E | 0149 | 2022-04-05 | 2018-07-27 | 3.95 | 3.43 | — | 3.8 | 0.021 | 1.74 | 1.0 | 0.10 | 10.97 | 0.01 | 1.834 | 1.60 | 0.01 | 1.9 | 97.9 | 0.3 | 0.48 | 0.79 | 0.80 | 1.58 | 3.8 | 0.003 | 0.73 | 0.0 | 0.04 | 16.18 | 0.00 | 2.029 | 14.68 | 0.31 | 3.0 | 96.9 | 0.1 | 0.91 | 1.51 | 0.79 | 0.81 | 1.50 | 112922 | 14231 | 6 | 0 | 0 | 0 | 0 | logfile |