The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6LN9 | 0928 | 2022-12-11 | 2019-12-28 | 3.4 | 3.61 | 3.06 | 3.6 | 0.003 | 0.54 | 0.0 | 0.04 | 12.32 | 0.00 | 2.075 | 7.70 | 0.00 | 4.1 | 95.9 | 0.0 | -3.36 | 0.63 | 0.73 | 1.41 | 3.6 | 0.003 | 0.60 | 0.0 | 0.04 | 14.86 | 0.00 | 1.358 | 10.76 | 0.24 | 4.5 | 95.5 | 0.0 | -0.23 | 0.53 | 0.62 | 0.75 | 1.21 | 7612 | 987 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6FU8 | 4319 | 2022-12-11 | 2018-02-26 | 3.2 | 4.43 | 2.97 | 3.8 | 0.013 | 2.11 | 2.0 | 0.10 | 20.18 | 0.02 | 2.617 | 1.47 | 2.78 | 11.2 | 86.2 | 2.5 | -3.87 | 0.17 | 0.42 | 2.23 | 4.1 | 0.003 | 0.82 | 0.0 | 0.04 | 14.91 | 0.00 | 2.261 | 15.40 | 0.00 | 10.0 | 88.8 | 1.2 | -1.84 | 3.11 | 0.23 | 0.62 | -0.89 | 1364 | 82 | 1 | 0 | 0 | 0 | 711 | logfile |
✔ | 6TAX | 10429 | 2022-12-19 | 2019-10-31 | 3.2 | 2.63 | — | 1.9 | 0.009 | 1.13 | 0.0 | 0.06 | 11.18 | 0.01 | 2.065 | 5.52 | 0.46 | 9.5 | 90.3 | 0.2 | -4.10 | 0.88 | 0.80 | 3.18 | 1.9 | 0.002 | 0.67 | 0.0 | 0.04 | 13.73 | 0.00 | 2.032 | 10.32 | 0.23 | 8.0 | 92.0 | 0.0 | -0.17 | 1.60 | 0.88 | 0.81 | 2.02 | 35235 | 4349 | 1 | 0 | 71 | 0 | 0 | logfile |
✔ | 6KWX | 0780 | 2022-12-13 | 2019-09-09 | 3.75 | 4.07 | — | 4.0 | 0.011 | 1.55 | 1.0 | 0.17 | 12.89 | 0.01 | 1.627 | 13.88 | 1.69 | 9.0 | 90.6 | 0.3 | -4.69 | 0.68 | 0.72 | 1.40 | 4.0 | 0.004 | 0.88 | 0.0 | 0.05 | 17.14 | 0.00 | 2.133 | 15.70 | 0.63 | 7.2 | 92.8 | 0.0 | -0.78 | 1.45 | 0.69 | 0.80 | 0.86 | 14227 | 1751 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6L42 | 0828 | 2022-12-13 | 2019-10-15 | 3.4 | 3.83 | — | 3.7 | 0.013 | 3.32 | 109.0 | 0.17 | 16.55 | 0.02 | 1.223 | 41.60 | 6.61 | 11.4 | 86.6 | 2.0 | -5.16 | 0.79 | 0.75 | 1.25 | 3.7 | 0.003 | 0.89 | 0.0 | 0.04 | 16.65 | 0.01 | 2.077 | 12.86 | 0.67 | 10.3 | 89.4 | 0.3 | -2.64 | 0.84 | 0.82 | 0.83 | 1.49 | 14827 | 1864 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6Y6K | 10706 | 2022-12-12 | 2020-02-26 | 3.78 | 3.86 | — | 3.8 | 0.012 | 0.99 | 1.0 | 0.06 | 16.00 | 0.01 | 1.889 | 11.51 | 2.36 | 12.5 | 87.4 | 0.2 | -5.70 | 0.75 | 0.88 | 2.58 | 3.8 | 0.003 | 0.64 | 0.0 | 0.04 | 16.81 | 0.00 | 1.988 | 4.79 | 0.35 | 5.7 | 94.2 | 0.1 | -2.59 | 1.33 | 0.76 | 0.86 | 2.08 | 10351 | 1299 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6D3R | 7793 | 2022-12-11 | 2018-04-16 | 4.3 | 4.80 | 4.40 | 4.5 | 0.017 | 1.75 | 0.0 | 0.10 | 9.07 | 0.01 | 2.385 | 0.71 | 0.00 | 1.5 | 98.5 | 0.0 | 0.66 | 0.66 | 0.76 | — | 4.6 | 0.003 | 0.63 | 0.0 | 0.04 | 11.99 | 0.00 | 2.245 | 7.92 | 0.00 | 2.6 | 97.4 | 0.0 | 1.98 | 1.20 | 0.67 | 0.77 | — | 7610 | 1127 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6LLY | 0915 | 2022-12-11 | 2019-12-24 | 2.8 | 2.92 | 2.72 | 2.9 | 0.003 | 0.60 | 0.0 | 0.04 | 12.24 | 0.00 | 2.043 | 6.26 | 0.12 | 3.1 | 96.9 | 0.0 | -4.03 | 0.66 | 0.79 | 2.62 | 2.9 | 0.003 | 0.57 | 0.0 | 0.04 | 15.47 | 0.00 | 1.330 | 8.18 | 1.16 | 2.9 | 97.1 | 0.0 | 0.06 | 0.49 | 0.64 | 0.80 | 1.86 | 7774 | 1006 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6WBY | 21601 | 2022-12-12 | 2020-03-27 | 3.4 | 3.73 | 3.45 | 3.6 | 0.010 | 1.04 | 0.0 | 0.06 | 12.68 | 0.01 | 2.042 | 3.28 | 0.32 | 6.3 | 93.6 | 0.1 | -5.12 | 0.78 | 0.87 | 3.21 | 3.6 | 0.003 | 0.63 | 0.0 | 0.04 | 13.46 | 0.00 | 2.224 | 5.85 | 0.11 | 4.4 | 95.6 | 0.0 | -0.48 | 0.36 | 0.76 | 0.87 | 2.48 | 9156 | 1250 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6YJ5 | 10816 | 2022-12-11 | 2020-04-02 | 3.5 | 2.92 | 3.56 | 3.3 | 0.007 | 0.87 | 0.0 | 0.05 | 13.19 | 0.01 | 2.183 | 4.49 | 0.00 | 12.5 | 87.5 | 0.0 | -5.13 | 0.42 | 0.62 | 3.01 | 3.3 | 0.004 | 0.71 | 0.0 | 0.05 | 15.00 | 0.01 | 2.270 | 8.98 | 0.00 | 10.5 | 89.5 | 0.0 | -1.97 | 0.80 | 0.50 | 0.72 | 3.38 | 2061 | 306 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 6WBX | 21600 | 2022-12-18 | 2020-03-27 | 3.5 | 3.82 | 3.55 | 3.7 | 0.012 | 1.07 | 0.0 | 0.06 | 13.49 | 0.01 | 2.190 | 4.07 | 0.11 | 7.9 | 92.0 | 0.1 | -5.51 | 0.77 | 0.87 | 3.70 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9170 | 1264 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7KTV | 23031 | 2022-12-11 | 2020-11-24 | 4.5 | 4.83 | — | 4.5 | 0.006 | 1.06 | 0.0 | 0.06 | 12.50 | 0.01 | 2.221 | 17.73 | 0.12 | 6.5 | 93.5 | 0.0 | -5.20 | 0.80 | 0.79 | — | 6.7 | 0.003 | 0.75 | 0.0 | 0.04 | 13.26 | 0.00 | 2.123 | 21.97 | 0.12 | 4.4 | 95.6 | 0.0 | -0.21 | 0.83 | 0.80 | 0.77 | — | 7577 | 995 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XE6 | 22144 | 2022-12-11 | 2020-06-12 | 4.53 | 4.61 | — | 4.5 | 0.011 | 1.40 | 2.0 | 0.07 | 14.92 | 0.01 | 1.098 | 10.14 | 1.05 | 11.3 | 87.4 | 1.2 | -4.98 | 0.52 | 0.76 | — | 4.5 | 0.003 | 0.76 | 0.0 | 0.04 | 13.55 | 0.00 | 2.180 | 13.85 | 0.00 | 9.8 | 89.7 | 0.5 | -1.86 | 1.21 | 0.53 | 0.75 | — | 6530 | 826 | 1 | 0 | 6 | 0 | 0 | logfile |
✔ | 7JGD | 22323 | 2022-12-14 | 2020-07-19 | 3.38 | 3.68 | — | 3.6 | 0.002 | 0.43 | 0.0 | 0.05 | 12.94 | 0.00 | 2.123 | 11.53 | 0.00 | 3.9 | 96.1 | 0.0 | 1.18 | 0.61 | 0.66 | 2.22 | 3.6 | 0.003 | 0.54 | 0.0 | 0.06 | 14.86 | 0.00 | 1.946 | 15.03 | 0.08 | 7.8 | 92.2 | 0.0 | 0.36 | 0.53 | 0.63 | 0.71 | 1.81 | 20292 | 1435 | 1 | 0 | 0 | 0 | 8505 | logfile |
✔ | 6UWL | 20923 | 2022-12-11 | 2019-11-05 | 3.62 | 3.73 | — | 3.7 | 0.008 | 1.16 | 0.0 | 0.06 | 16.05 | 0.01 | 2.303 | 6.24 | 0.00 | 7.6 | 92.2 | 0.3 | -4.71 | 0.67 | 0.82 | 1.71 | 3.7 | 0.004 | 0.77 | 0.0 | 0.04 | 16.09 | 0.00 | 2.200 | 12.65 | 0.64 | 6.3 | 93.7 | 0.0 | -0.08 | 0.55 | 0.66 | 0.81 | 1.34 | 3029 | 402 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6WYJ | 21966 | 2022-12-11 | 2020-05-13 | 3.7 | 3.74 | — | 3.8 | 0.010 | 0.64 | 0.0 | 0.05 | 12.33 | 0.00 | 2.268 | 5.08 | 0.00 | 5.3 | 94.7 | 0.0 | -4.80 | 0.59 | 0.78 | 4.37 | 3.8 | 0.003 | 0.60 | 0.0 | 0.04 | 14.54 | 0.00 | 2.276 | 5.58 | 0.00 | 1.8 | 98.2 | 0.0 | 2.06 | 0.58 | 0.63 | 0.81 | 1.59 | 2949 | 398 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WU0 | 21901 | 2022-12-11 | 2020-05-04 | 3.59 | 3.92 | — | 3.9 | 0.003 | 0.65 | 0.0 | 0.04 | 13.43 | 0.00 | 2.211 | 10.57 | 0.00 | 6.0 | 94.0 | 0.0 | -1.89 | 0.56 | 0.63 | 0.78 | 3.9 | 0.003 | 0.78 | 0.0 | 0.04 | 15.45 | 0.01 | 2.119 | 12.73 | 0.61 | 6.6 | 93.4 | 0.0 | 0.34 | 0.53 | 0.54 | 0.64 | 0.62 | 6340 | 854 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 6V4D | 21040 | 2022-12-18 | 2019-11-27 | 3.8 | 4.13 | — | 4.1 | 0.007 | 0.90 | 0.0 | 0.06 | 13.63 | 0.01 | 1.752 | 21.75 | 1.35 | 7.0 | 93.0 | 0.0 | -3.84 | 0.49 | 0.80 | 2.10 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3095 | 422 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6YNV | 10857 | 2022-12-11 | 2020-04-14 | 2.8 | 3.33 | 2.74 | 3.2 | 0.014 | 0.90 | 0.0 | 0.06 | 15.71 | 0.01 | 2.129 | 6.07 | 1.67 | 6.0 | 94.0 | 0.0 | -3.24 | 0.64 | 0.88 | 5.38 | 3.2 | 0.003 | 0.55 | 0.0 | 0.04 | 15.77 | 0.00 | 2.222 | 2.81 | 0.56 | 5.3 | 94.7 | 0.0 | 0.31 | 1.43 | 0.64 | 0.90 | 5.07 | 6724 | 417 | 1 | 0 | 1 | 0 | 3285 | logfile |
✔ | 6ZFP | 11185 | 2022-12-16 | 2020-06-17 | 3.24 | 3.95 | 3.34 | 3.7 | 0.006 | 0.70 | 0.0 | 0.05 | 14.34 | 0.00 | 2.198 | 9.82 | 0.12 | 8.4 | 91.5 | 0.1 | -1.19 | 0.83 | 0.83 | 1.85 | 3.7 | 0.002 | 0.61 | 0.0 | 0.04 | 15.61 | 0.00 | 2.206 | 7.45 | 0.19 | 5.9 | 94.0 | 0.1 | 0.30 | 0.77 | 0.80 | 0.77 | 1.30 | 29385 | 3676 | 1 | 0 | 28 | 0 | 0 | logfile |