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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7W7V | 32349 | 2024-03-11 | 2021-12-06 | 3.0 | 2.82 | 3.01 | 3.0 | 0.003 | 0.56 | 0.0 | 0.04 | 13.32 | 0.00 | 2.010 | 8.84 | 0.00 | 2.5 | 97.5 | 0.0 | 0.63 | 0.59 | 0.73 | 1.18 | 3.0 | 0.003 | 0.53 | 0.0 | 0.04 | 16.38 | 0.00 | 1.944 | 7.44 | 2.78 | 2.7 | 97.3 | 0.0 | 0.04 | 0.53 | 0.61 | 0.76 | 1.39 | 7823 | 1012 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 8QSM | 18636 | 2024-03-10 | 2023-10-10 | 3.69 | 4.23 | 3.52 | 4.0 | 0.002 | 0.48 | 0.0 | 0.03 | 10.37 | 0.00 | 2.269 | 4.15 | 3.75 | 3.5 | 96.5 | 0.0 | 2.22 | 0.55 | 0.76 | 0.70 | 4.0 | 0.003 | 0.87 | 0.0 | 0.04 | 15.54 | 0.00 | 2.035 | 14.93 | 3.49 | 3.5 | 96.5 | 0.0 | 1.79 | 1.46 | 0.56 | 0.78 | 1.37 | 3579 | 464 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R9o | 24330 | 2024-03-11 | 2021-06-29 | 4.0 | 4.66 | — | 4.0 | 0.002 | 0.38 | 0.0 | 0.04 | 4.49 | 0.00 | 2.252 | 2.85 | 0.25 | 10.5 | 88.7 | 0.8 | -4.93 | 0.83 | 0.71 | — | 4.0 | 0.003 | 0.61 | 0.0 | 0.04 | 10.79 | 0.00 | 1.908 | 12.95 | 0.98 | 4.0 | 96.0 | 0.0 | -0.49 | 3.44 | 0.88 | 0.83 | — | 7726 | 505 | 1 | 0 | 0 | 0 | 3938 | logfile |
✔ | 7R6N | 24283 | 2024-03-11 | 2021-06-22 | 4.1 | 3.51 | — | 3.7 | 0.006 | 0.96 | 0.0 | 0.04 | 25.04 | 0.01 | 2.036 | 3.68 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.56 | 0.75 | — | 3.7 | 0.006 | 0.82 | 0.0 | 0.04 | 24.95 | 0.01 | 1.770 | 17.37 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.26 | 0.58 | 0.76 | — | 7588 | 0 | 1 | 354 | 12 | 0 | 0 | logfile |
✔ | 6PZC | 20534 | 2024-03-11 | 2019-07-31 | 4.34 | 4.63 | — | 4.4 | 0.008 | 1.12 | 0.0 | 0.06 | 11.22 | 0.01 | 2.137 | 7.52 | 0.42 | 9.7 | 90.3 | 0.0 | -5.15 | 0.60 | 0.54 | — | 4.4 | 0.004 | 0.75 | 0.0 | 0.04 | 11.33 | 0.00 | 2.087 | 13.46 | 0.00 | 6.9 | 93.0 | 0.1 | -0.07 | 1.65 | 0.70 | 0.78 | — | 7456 | 1173 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XoW | 22282 | 2024-03-11 | 2020-07-07 | 4.6 | 8.17 | 4.40 | 7.0 | 0.006 | 1.00 | 0.0 | 0.05 | 13.39 | 0.01 | 1.991 | 24.14 | 0.23 | 4.2 | 95.8 | 0.0 | -0.98 | 0.87 | 0.72 | — | 6.9 | 0.004 | 0.76 | 0.0 | 0.04 | 13.49 | 0.01 | 2.102 | 27.34 | 0.23 | 4.6 | 95.4 | 0.0 | 0.07 | 1.90 | 0.92 | 0.82 | — | 7711 | 966 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UPT | 42455 | 2024-03-10 | 2023-10-23 | 2.8 | 3.38 | 2.84 | 2.9 | 0.016 | 2.20 | 0.0 | 0.16 | 30.45 | 0.01 | 1.072 | 99.56 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.23 | 0.59 | — | 2.9 | 0.005 | 0.73 | 0.0 | 0.04 | 27.91 | 0.01 | 2.113 | 22.27 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.95 | 0.28 | 0.87 | — | 1518 | 0 | 1 | 71 | 0 | 0 | 0 | logfile |
✔ | 5LiJ | 4054 | 2024-03-10 | 2016-07-14 | 4.2 | 3.63 | — | 4.2 | 0.009 | 2.92 | 4.0 | 0.17 | 15.82 | 0.01 | 2.249 | 25.64 | 0.00 | 10.7 | 89.3 | 0.0 | -6.36 | 0.85 | 0.76 | — | 3.8 | 0.005 | 1.17 | 0.0 | 0.04 | 10.44 | 0.00 | 2.149 | 15.78 | 0.00 | 35.3 | 64.7 | 0.0 | -5.53 | 1.48 | 0.86 | 0.78 | — | 761 | 152 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PZi | 20535 | 2024-03-11 | 2019-07-31 | 4.5 | 4.80 | — | 4.4 | 0.005 | 1.13 | 0.0 | 0.05 | 9.01 | 0.01 | 2.253 | 2.60 | 0.00 | 6.3 | 93.7 | 0.0 | -3.83 | 0.67 | 0.80 | — | 4.4 | 0.002 | 0.65 | 0.0 | 0.04 | 8.28 | 0.00 | 2.162 | 5.20 | 0.00 | 3.1 | 96.9 | 0.0 | 2.16 | 0.55 | 0.68 | 0.83 | — | 7985 | 1412 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7PTX | 13642 | 2024-03-11 | 2021-09-27 | 4.03 | 4.17 | — | 3.9 | 0.003 | 0.76 | 0.0 | 0.05 | 14.08 | 0.01 | 2.202 | 19.18 | 0.00 | 10.6 | 89.4 | 0.0 | -1.97 | 0.84 | 0.72 | — | 3.9 | 0.003 | 0.76 | 0.0 | 0.05 | 14.47 | 0.00 | 2.241 | 19.24 | 0.00 | 10.5 | 89.5 | 0.0 | -1.28 | 0.52 | 0.85 | 0.74 | — | 7653 | 1000 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R9M | 24329 | 2024-03-11 | 2021-06-29 | 4.0 | 4.58 | — | 3.9 | 0.002 | 0.38 | 0.0 | 0.04 | 4.68 | 0.00 | 2.214 | 3.88 | 0.00 | 8.3 | 90.9 | 0.8 | -4.83 | 0.85 | 0.77 | — | 3.9 | 0.002 | 0.54 | 0.0 | 0.04 | 9.11 | 0.00 | 2.104 | 8.80 | 0.49 | 3.2 | 96.8 | 0.0 | -0.14 | 1.72 | 0.86 | 0.78 | — | 7727 | 505 | 1 | 0 | 0 | 0 | 3939 | logfile |
✔ | 8JY4 | 36719 | 2024-03-18 | 2023-07-02 | 3.58 | 4.95 | 3.68 | 4.2 | 0.003 | 0.55 | 0.0 | 0.04 | 15.96 | 0.00 | 1.980 | 6.92 | 0.00 | 3.0 | 96.9 | 0.1 | -0.52 | 0.62 | 0.78 | 0.68 | 4.2 | 0.003 | 0.64 | 0.0 | 0.04 | 16.09 | 0.00 | 2.086 | 13.89 | 2.28 | 3.6 | 96.3 | 0.1 | 1.01 | 1.35 | 0.62 | 0.80 | 0.40 | 22246 | 1383 | 1 | 0 | 0 | 0 | 11252 | logfile |
✔ | 7YAM | 33717 | 2024-03-11 | 2022-06-28 | 3.3 | 3.46 | 3.26 | 3.4 | 0.003 | 0.53 | 0.0 | 0.04 | 14.47 | 0.00 | 1.756 | 6.05 | 0.13 | 1.6 | 98.4 | 0.0 | 1.95 | 0.70 | 0.80 | 2.17 | 3.4 | 0.003 | 0.93 | 0.0 | 0.04 | 16.23 | 0.00 | 1.933 | 7.97 | 2.41 | 2.1 | 97.9 | 0.0 | 1.88 | 0.40 | 0.69 | 0.82 | 1.77 | 6672 | 871 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7K8C | 22726 | 2024-03-15 | 2020-09-26 | 4.27 | 4.22 | — | 4.2 | 0.004 | 0.84 | 2.0 | 0.05 | 13.70 | 0.01 | 2.196 | 12.83 | 0.85 | 3.2 | 96.8 | 0.0 | 0.14 | 0.47 | 0.56 | — | 4.2 | 0.003 | 0.80 | 0.0 | 0.04 | 13.36 | 0.01 | 2.193 | 13.37 | 0.17 | 4.5 | 95.5 | 0.0 | 0.49 | 0.64 | 0.50 | 0.61 | — | 5524 | 723 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VV6 | 32139 | 2024-03-10 | 2021-11-04 | 3.3 | 3.47 | — | 3.5 | 0.010 | 1.38 | 0.0 | 0.07 | 19.05 | 0.01 | 2.291 | 4.89 | 10.37 | 5.2 | 94.8 | 0.0 | -4.22 | 0.62 | 0.83 | 1.64 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 16.46 | 0.00 | 2.189 | 6.66 | 3.73 | 2.2 | 97.8 | 0.0 | 3.08 | 0.66 | 0.65 | 0.86 | 1.99 | 2227 | 271 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7FJP | 31626 | 2024-03-11 | 2021-08-04 | 3.0 | 3.19 | — | 3.2 | 0.006 | 1.14 | 1.0 | 0.07 | 10.95 | 0.01 | 1.270 | 7.70 | 0.80 | 7.0 | 92.2 | 0.7 | -4.60 | 0.71 | 0.81 | 3.22 | 3.1 | 0.003 | 0.75 | 0.0 | 0.04 | 14.42 | 0.00 | 2.158 | 6.87 | 2.55 | 6.1 | 93.7 | 0.2 | -0.45 | 0.64 | 0.69 | 0.83 | 2.56 | 7239 | 983 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7LQ6 | 23482 | 2024-03-10 | 2021-02-13 | 3.28 | 4.07 | 3.16 | 3.5 | 0.005 | 0.76 | 0.0 | 0.05 | 15.77 | 0.00 | 1.549 | 9.45 | 1.41 | 5.5 | 94.4 | 0.2 | -4.83 | 0.90 | 0.85 | 3.36 | 3.5 | 0.002 | 0.59 | 0.0 | 0.04 | 16.29 | 0.00 | 2.146 | 7.09 | 0.88 | 3.9 | 96.1 | 0.0 | 0.16 | 1.02 | 0.91 | 0.87 | 1.86 | 5267 | 672 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UWF | 20922 | 2024-03-10 | 2019-11-05 | 3.08 | 3.26 | — | 3.3 | 0.008 | 1.08 | 0.0 | 0.05 | 17.11 | 0.01 | 2.294 | 2.14 | 0.00 | 3.1 | 96.9 | 0.0 | -3.86 | 0.70 | 0.85 | 2.48 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 15.52 | 0.00 | 2.238 | 6.57 | 2.46 | 3.4 | 96.6 | 0.0 | 1.07 | 0.29 | 0.69 | 0.86 | 2.42 | 3178 | 417 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6X13 | 21987 | 2024-03-10 | 2020-05-18 | 3.66 | 3.77 | — | 3.8 | 0.007 | 1.04 | 1.0 | 0.05 | 16.90 | 0.01 | 2.340 | 4.80 | 0.31 | 6.5 | 93.5 | 0.0 | -3.73 | 0.64 | 0.84 | 1.86 | 3.8 | 0.004 | 0.67 | 0.0 | 0.04 | 16.22 | 0.01 | 2.235 | 9.29 | 1.54 | 5.3 | 94.7 | 0.0 | 1.59 | 0.42 | 0.64 | 0.84 | 1.50 | 3136 | 417 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7K8A | 22724 | 2024-03-15 | 2020-09-26 | 3.65 | 3.57 | — | 3.7 | 0.004 | 0.92 | 1.0 | 0.05 | 13.38 | 0.01 | 2.226 | 16.09 | 0.17 | 6.4 | 93.6 | 0.0 | -1.30 | 0.40 | 0.55 | 0.67 | 3.7 | 0.004 | 0.82 | 0.0 | 0.04 | 15.98 | 0.01 | 2.180 | 17.79 | 5.44 | 5.7 | 94.2 | 0.1 | -0.95 | 0.44 | 0.43 | 0.57 | 0.27 | 5513 | 723 | 1 | 0 | 0 | 0 | 0 | logfile |