The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6V6C | 21068 | 2023-04-20 | 2019-12-04 | 4.5 | 4.50 | — | 4.4 | 0.003 | 0.55 | 0.0 | 0.04 | 13.78 | 0.00 | 2.226 | 7.10 | 0.00 | 5.1 | 94.9 | 0.0 | -4.56 | 0.42 | 0.82 | — | 4.4 | 0.003 | 0.67 | 0.0 | 0.04 | 14.26 | 0.00 | 2.222 | 6.48 | 0.23 | 4.7 | 95.3 | 0.0 | -0.11 | 2.03 | 0.42 | 0.81 | — | 4007 | 497 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5YW7 | 6847 | 2023-04-21 | 2017-11-29 | 4.4 | 4.45 | 4.13 | 4.3 | 0.004 | 0.71 | 1.0 | 0.05 | 13.01 | 0.01 | 2.246 | 14.02 | 6.49 | 4.3 | 95.7 | 0.0 | -2.58 | 0.70 | 0.79 | — | 4.3 | 0.003 | 0.71 | 0.0 | 0.04 | 13.10 | 0.00 | 2.227 | 12.04 | 0.00 | 3.8 | 96.2 | 0.0 | 0.76 | 1.83 | 0.71 | 0.80 | — | 8944 | 1140 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6PLZ | 20381 | 2023-04-23 | 2019-07-01 | 3.0 | 3.68 | — | 3.5 | 0.006 | 0.97 | 0.0 | 0.06 | 8.93 | 0.01 | 2.338 | 4.40 | 0.00 | 5.3 | 94.7 | 0.0 | -5.25 | 0.60 | 0.85 | 4.29 | 3.5 | 0.003 | 0.67 | 0.0 | 0.04 | 15.36 | 0.00 | 2.102 | 9.19 | 2.85 | 3.1 | 96.9 | 0.0 | -0.67 | 0.70 | 0.56 | 0.84 | 3.32 | 14210 | 1725 | 15 | 0 | 20 | 0 | 0 | logfile |
✔ | 5WRG | 6679 | 2023-04-23 | 2016-12-01 | 4.3 | 4.45 | — | 4.3 | 0.007 | 1.40 | 0.0 | 0.07 | 12.06 | 0.01 | 2.191 | 9.91 | 0.53 | 18.0 | 81.4 | 0.7 | -5.05 | 0.66 | 0.69 | — | 4.3 | 0.004 | 1.00 | 0.0 | 0.05 | 12.31 | 0.00 | 2.019 | 20.07 | 0.00 | 18.0 | 81.8 | 0.1 | -3.25 | 1.52 | 0.68 | 0.76 | — | 16317 | 2208 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NBX | 12262 | 2023-04-26 | 2021-01-28 | 4.8 | 5.30 | 4.72 | 4.9 | 0.008 | 1.04 | 0.0 | 0.05 | 15.90 | 0.01 | 1.950 | 12.59 | 0.00 | 12.3 | 87.6 | 0.1 | -4.49 | 0.76 | 0.82 | — | 4.9 | 0.004 | 0.64 | 0.0 | 0.04 | 14.15 | 0.00 | 1.865 | 13.30 | 0.00 | 9.7 | 90.3 | 0.0 | -2.01 | 0.71 | 0.76 | 0.81 | — | 22637 | 1475 | 5 | 0 | 0 | 0 | 11129 | logfile |
✔ | 7E3B | 30978 | 2023-04-20 | 2021-02-08 | 4.2 | 4.05 | — | 4.0 | 0.006 | 0.81 | 0.0 | 0.05 | 13.28 | 0.00 | 2.241 | 16.63 | 0.00 | 8.2 | 91.8 | 0.0 | -2.04 | 0.74 | 0.84 | — | 4.0 | 0.003 | 0.70 | 0.0 | 0.05 | 13.19 | 0.00 | 2.247 | 15.70 | 0.00 | 5.8 | 94.2 | 0.0 | -1.19 | 0.41 | 0.74 | 0.83 | — | 3299 | 421 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 7D45 | 30570 | 2023-04-28 | 2020-09-22 | 3.8 | 3.90 | — | 3.9 | 0.009 | 0.92 | 0.0 | 0.05 | 15.23 | 0.00 | 2.082 | 19.92 | 0.35 | 16.6 | 83.1 | 0.2 | -4.81 | 0.79 | 0.80 | 1.51 | 3.8 | 0.004 | 0.69 | 0.0 | 0.05 | 16.54 | 0.00 | 2.083 | 14.87 | 0.39 | 8.2 | 91.7 | 0.1 | -1.74 | 1.57 | 0.78 | 0.78 | 1.20 | 27529 | 3659 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 6DUZ | 8913 | 2023-04-27 | 2018-06-22 | 3.6 | 3.88 | — | 3.8 | 0.006 | 0.97 | 0.0 | 0.05 | 11.01 | 0.01 | 1.677 | 4.59 | 4.35 | 3.2 | 96.8 | 0.0 | -4.32 | 0.76 | 0.82 | 2.31 | 3.8 | 0.003 | 0.64 | 0.0 | 0.04 | 16.45 | 0.00 | 2.126 | 7.59 | 1.01 | 2.7 | 97.3 | 0.0 | -0.08 | 1.86 | 0.66 | 0.85 | 1.70 | 72744 | 9072 | 48 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZH0 | 14716 | 2023-04-20 | 2022-04-05 | 3.2 | 3.63 | 3.07 | 3.5 | 0.004 | 0.72 | 0.0 | 0.04 | 13.97 | 0.01 | 2.191 | 14.27 | 0.24 | 6.0 | 94.0 | 0.0 | 1.08 | 0.65 | 0.75 | 3.58 | 3.5 | 0.003 | 0.68 | 0.0 | 0.04 | 16.34 | 0.00 | 2.220 | 14.02 | 0.73 | 5.5 | 94.3 | 0.2 | 1.04 | 0.51 | 0.67 | 0.77 | 2.84 | 3869 | 495 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R8C | 24315 | 2023-04-20 | 2021-06-26 | 3.7 | 4.19 | — | 4.1 | 0.002 | 0.49 | 0.0 | 0.04 | 12.82 | 0.00 | 2.073 | 6.73 | 0.21 | 4.8 | 95.2 | 0.0 | -1.63 | 0.68 | 0.85 | 1.76 | 4.1 | 0.002 | 0.66 | 0.0 | 0.04 | 14.79 | 0.00 | 2.156 | 8.76 | 0.21 | 5.1 | 94.9 | 0.0 | 1.17 | 1.05 | 0.71 | 0.87 | 1.83 | 8538 | 1090 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oCF | 12806 | 2023-04-24 | 2021-04-26 | 3.6 | 3.48 | — | 3.5 | 0.018 | 0.95 | 0.0 | 0.11 | 13.48 | 0.00 | 2.067 | 5.05 | 0.00 | 4.2 | 95.8 | 0.0 | 0.18 | 0.68 | 0.78 | 3.00 | 3.5 | 0.004 | 0.62 | 0.0 | 0.04 | 15.00 | 0.00 | 2.035 | 6.85 | 0.54 | 3.3 | 96.7 | 0.0 | 0.90 | 1.24 | 0.69 | 0.82 | 2.80 | 17088 | 2298 | 15 | 0 | 30 | 0 | 0 | logfile |
✔ | 7WTG | 32785 | 2023-04-20 | 2022-02-04 | 3.8 | 3.93 | — | 3.9 | 0.006 | 1.20 | 0.0 | 0.07 | 14.44 | 0.01 | 2.297 | 4.61 | 0.00 | 9.1 | 90.9 | 0.0 | -2.94 | 0.67 | 0.73 | 2.60 | 3.9 | 0.003 | 0.77 | 0.0 | 0.05 | 15.85 | 0.01 | 2.100 | 12.76 | 0.56 | 9.3 | 90.5 | 0.2 | -2.41 | 0.66 | 0.70 | 0.76 | 1.80 | 3318 | 425 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6DVW | 8919 | 2023-04-25 | 2018-06-25 | 4.3 | 4.35 | — | 4.3 | 0.008 | 1.19 | 0.0 | 0.06 | 11.88 | 0.01 | 1.840 | 5.62 | 0.87 | 15.9 | 83.7 | 0.4 | -5.79 | 0.68 | 0.80 | — | 4.3 | 0.004 | 0.80 | 0.0 | 0.04 | 13.27 | 0.00 | 2.102 | 12.09 | 0.00 | 14.6 | 85.1 | 0.3 | -1.90 | 0.87 | 0.67 | 0.80 | — | 21004 | 2576 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R19 | 14235 | 2023-04-27 | 2022-02-02 | 3.3 | 3.69 | 3.53 | 3.6 | 0.004 | 0.59 | 0.0 | 0.05 | 11.43 | 0.01 | 2.179 | 4.01 | 0.18 | 2.1 | 97.9 | 0.0 | 0.42 | 0.82 | 0.83 | 2.64 | 3.6 | 0.003 | 0.57 | 0.0 | 0.04 | 13.78 | 0.00 | 2.246 | 5.51 | 0.14 | 3.0 | 97.0 | 0.0 | 0.12 | 0.53 | 0.85 | 0.86 | 2.52 | 25388 | 3178 | 10 | 0 | 38 | 0 | 0 | logfile |
✔ | 6PXD | 20518 | 2023-04-23 | 2019-07-25 | 2.9 | 2.99 | — | 3.3 | 0.007 | 1.05 | 0.0 | 0.06 | 10.53 | 0.01 | 2.154 | 11.21 | 1.32 | 4.7 | 95.3 | 0.0 | -3.03 | 0.64 | 0.82 | 4.45 | 3.2 | 0.004 | 0.70 | 0.0 | 0.05 | 15.20 | 0.00 | 2.229 | 8.99 | 2.12 | 4.4 | 95.6 | 0.0 | 0.28 | 0.67 | 0.65 | 0.84 | 3.72 | 13899 | 1700 | 13 | 0 | 13 | 1 | 0 | logfile |
✔ | 5VMS | 8712 | 2023-04-23 | 2017-04-28 | 3.7 | 4.22 | — | 4.2 | 0.007 | 1.47 | 12.0 | 0.07 | 12.69 | 0.00 | 2.234 | 6.34 | 0.00 | 3.2 | 96.8 | 0.0 | 2.06 | 0.56 | 0.76 | 1.80 | 4.2 | 0.004 | 0.77 | 0.0 | 0.04 | 16.46 | 0.00 | 2.165 | 14.25 | 1.10 | 2.8 | 97.2 | 0.0 | 2.84 | 0.86 | 0.60 | 0.80 | 1.41 | 14916 | 1936 | 8 | 0 | 12 | 0 | 0 | logfile |
✔ | 6N38 | 9341 | 2023-04-27 | 2018-11-14 | 3.7 | 3.82 | — | 3.8 | 0.013 | 1.29 | 0.0 | 0.08 | 10.00 | 0.01 | 2.216 | 1.17 | 0.31 | 2.7 | 97.2 | 0.1 | 0.10 | 0.78 | 0.79 | 2.54 | 3.7 | 0.002 | 0.65 | 0.0 | 0.04 | 14.39 | 0.00 | 2.192 | 6.42 | 0.16 | 2.2 | 97.8 | 0.0 | 0.89 | 0.83 | 0.81 | 0.83 | 2.23 | 24456 | 3098 | 11 | 0 | 39 | 0 | 0 | logfile |
✔ | 7VLY | 32031 | 2023-04-22 | 2021-10-05 | 2.45 | 2.52 | — | 2.5 | 0.002 | 0.61 | 0.0 | 0.04 | 15.83 | 0.01 | 2.232 | 6.18 | 2.49 | 4.0 | 96.0 | 0.0 | 1.19 | 0.72 | 0.85 | 2.83 | 2.5 | 0.003 | 0.62 | 0.0 | 0.04 | 16.33 | 0.01 | 2.227 | 6.77 | 2.34 | 5.2 | 94.8 | 0.0 | 1.75 | 0.90 | 0.74 | 0.88 | 2.76 | 13347 | 1773 | 18 | 0 | 3 | 30 | 0 | logfile |
✔ | 6X3T | 22032 | 2023-04-24 | 2020-05-21 | 2.55 | 2.18 | 2.60 | 2.5 | 0.005 | 0.66 | 0.0 | 0.05 | 13.21 | 0.00 | 2.171 | 6.00 | 2.28 | 3.0 | 97.0 | 0.0 | -0.78 | 0.73 | 0.82 | 4.33 | 2.5 | 0.004 | 0.62 | 0.0 | 0.04 | 15.86 | 0.00 | 2.144 | 6.89 | 3.03 | 2.7 | 97.3 | 0.0 | 0.90 | 0.38 | 0.77 | 0.85 | 4.10 | 17415 | 2121 | 18 | 0 | 27 | 0 | 0 | logfile |
✔ | 7K43 | 22659 | 2023-04-29 | 2020-09-14 | 2.6 | 2.81 | 2.75 | 2.8 | 0.018 | 1.50 | 12.0 | 0.11 | 10.83 | 0.01 | 2.456 | 0.84 | 0.09 | 2.1 | 97.9 | 0.1 | 0.34 | 0.74 | 0.78 | 4.38 | 2.8 | 0.003 | 0.62 | 0.0 | 0.04 | 15.22 | 0.00 | 2.147 | 7.08 | 1.91 | 2.4 | 97.6 | 0.0 | 0.56 | 1.21 | 0.72 | 0.82 | 3.68 | 30390 | 3783 | 33 | 0 | 78 | 0 | 0 | logfile |