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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 3JBS | 6478 | 2022-05-12 | 2015-10-13 | 2.9 | 3.04 | — | 3.2 | 0.010 | 1.32 | 0.0 | 0.06 | 8.67 | 0.01 | 2.510 | 0.00 | 0.00 | 2.9 | 97.1 | 0.0 | 0.51 | 0.21 | 0.76 | 4.15 | 3.0 | 0.004 | 0.63 | 0.0 | 0.04 | 18.27 | 0.00 | 2.222 | 7.93 | 3.29 | 1.7 | 98.3 | 0.0 | 0.83 | 1.30 | 0.22 | 0.81 | 3.95 | 1401 | 175 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TGP | 10500 | 2022-05-12 | 2019-11-17 | 4.4 | 4.64 | — | 4.3 | 0.013 | 1.90 | 1.0 | 0.13 | 12.88 | 0.01 | 2.228 | 7.38 | 2.08 | 5.2 | 94.8 | 0.0 | -3.36 | 0.45 | 0.85 | — | 4.1 | 0.005 | 0.79 | 0.0 | 0.04 | 12.86 | 0.00 | 2.270 | 20.30 | 0.00 | 5.2 | 94.8 | 0.0 | 0.17 | 1.84 | 0.44 | 0.79 | — | 1344 | 176 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QJH | 4563 | 2022-05-12 | 2019-01-24 | 3.3 | 3.70 | 2.77 | 3.6 | 0.012 | 1.21 | 3.0 | 0.10 | 14.39 | 0.01 | 2.673 | 1.49 | 1.96 | 7.0 | 93.0 | 0.0 | -3.22 | 0.36 | 0.83 | 2.97 | 3.6 | 0.003 | 0.61 | 0.0 | 0.05 | 15.77 | 0.00 | 2.278 | 5.61 | 0.00 | 2.3 | 97.7 | 0.0 | -2.55 | 1.57 | 0.31 | 0.78 | 2.85 | 1302 | 177 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RiU | 4898 | 2022-05-12 | 2019-04-25 | 3.9 | 6.21 | 2.04 | 7.0 | 0.008 | 1.19 | 0.0 | 0.09 | 15.19 | 0.01 | 2.182 | 5.20 | 0.00 | 8.4 | 91.6 | 0.0 | -5.77 | 0.59 | 0.69 | 0.56 | 7.1 | 0.003 | 0.67 | 0.0 | 0.03 | 16.53 | 0.00 | 2.057 | 13.17 | 0.00 | 5.1 | 94.9 | 0.0 | -0.39 | 1.43 | 0.61 | 0.75 | 1.30 | 2882 | 182 | 2 | 0 | 0 | 0 | 1430 | logfile |
✔ | 6R23 | 4708 | 2022-05-12 | 2019-03-15 | 4.9 | 4.57 | — | 4.6 | 0.006 | 1.07 | 0.0 | 0.05 | 16.56 | 0.01 | 2.332 | 7.52 | 0.00 | 7.9 | 92.1 | 0.0 | -4.61 | 0.60 | 0.75 | — | 4.6 | 0.003 | 0.59 | 0.0 | 0.03 | 16.52 | 0.00 | 2.361 | 7.85 | 0.00 | 6.7 | 93.3 | 0.0 | 0.29 | 3.60 | 0.60 | 0.73 | — | 1518 | 182 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QK3 | 14030 | 2022-05-12 | 2021-12-17 | 2.44 | 2.73 | 2.35 | 2.7 | 0.010 | 2.07 | 0.0 | 0.11 | 12.55 | 0.01 | 2.519 | 0.00 | 0.00 | 3.4 | 96.6 | 0.0 | -3.04 | 0.38 | 0.77 | 5.65 | 2.7 | 0.003 | 0.73 | 0.0 | 0.05 | 16.22 | 0.00 | 2.309 | 3.65 | 1.28 | 4.0 | 96.0 | 0.0 | -2.83 | 1.47 | 0.40 | 0.82 | 5.18 | 2742 | 183 | 3 | 0 | 0 | 0 | 1407 | logfile |
✔ | 6C4H | 7340 | 2022-05-13 | 2018-01-12 | 3.1 | 3.33 | — | 3.3 | 0.011 | 1.19 | 1.0 | 0.11 | 16.68 | 0.05 | 1.913 | 7.76 | 6.80 | 5.3 | 94.7 | 0.0 | -2.61 | 0.43 | 0.85 | 3.61 | 3.3 | 0.008 | 0.92 | 0.0 | 0.04 | 15.73 | 0.01 | 1.777 | 7.89 | 0.68 | 7.0 | 93.0 | 0.0 | -2.37 | 0.39 | 0.39 | 0.86 | 4.75 | 15326 | 184 | 8 | 648 | 34 | 0 | 0 | logfile |
✔ | 7ABK | 11698 | 2022-05-12 | 2020-09-07 | 3.6 | 4.10 | 3.49 | 3.9 | 0.004 | 0.66 | 0.0 | 0.04 | 16.30 | 0.00 | 2.315 | 5.67 | 1.23 | 1.5 | 98.5 | 0.0 | 0.91 | 0.28 | 0.87 | 1.10 | 3.9 | 0.003 | 0.67 | 0.0 | 0.03 | 19.97 | 0.01 | 2.302 | 7.56 | 0.62 | 2.1 | 97.9 | 0.0 | 5.19 | 1.33 | 0.28 | 0.85 | 1.55 | 1574 | 196 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oG6 | 12879 | 2022-05-12 | 2021-05-06 | 3.3 | 3.47 | — | 2.9 | 0.008 | 0.82 | 0.0 | 0.04 | 17.33 | 0.01 | 2.325 | 7.36 | 6.10 | 9.6 | 90.4 | 0.0 | -4.47 | 0.28 | 0.82 | 2.77 | 2.9 | 0.003 | 0.58 | 0.0 | 0.04 | 16.44 | 0.00 | 2.233 | 9.92 | 0.00 | 6.6 | 93.4 | 0.0 | -0.04 | 0.54 | 0.27 | 0.84 | 3.04 | 1602 | 199 | 2 | 5 | 0 | 0 | 0 | logfile |
✔ | 7QKH | 14042 | 2022-05-12 | 2021-12-17 | 3.17 | 3.37 | 2.07 | 3.5 | 0.011 | 2.48 | 5.0 | 0.19 | 15.22 | 0.01 | 2.470 | 2.26 | 0.00 | 14.6 | 85.4 | 0.0 | -3.56 | 0.37 | 0.74 | 3.98 | 3.5 | 0.004 | 0.97 | 0.0 | 0.22 | 15.37 | 0.00 | 2.116 | 8.71 | 0.00 | 6.8 | 93.2 | 0.0 | -2.57 | 2.30 | 0.31 | 0.69 | 4.34 | 3105 | 204 | 6 | 0 | 0 | 0 | 1593 | logfile |
✔ | 6X0V | 21985 | 2022-05-12 | 2020-05-17 | 4.5 | 4.37 | — | 4.4 | 0.003 | 0.62 | 1.0 | 0.04 | 11.58 | 0.00 | 2.285 | 15.16 | 4.48 | 3.5 | 96.0 | 0.5 | -2.45 | 0.40 | 0.74 | — | 4.4 | 0.002 | 0.46 | 0.0 | 0.04 | 13.09 | 0.00 | 2.230 | 19.17 | 0.00 | 6.0 | 94.0 | 0.0 | 2.59 | 1.22 | 0.40 | 0.75 | — | 1384 | 211 | 4 | 0 | 0 | 0 | 62 | logfile |
✔ | 7QL1 | 14060 | 2022-05-12 | 2021-12-19 | 3.34 | 3.41 | 3.13 | 3.4 | 0.011 | 2.01 | 0.0 | 0.10 | 11.06 | 0.01 | 2.654 | 1.47 | 0.00 | 7.5 | 92.5 | 0.0 | -3.09 | 0.42 | 0.83 | 4.57 | 3.4 | 0.004 | 0.73 | 0.0 | 0.05 | 15.67 | 0.00 | 2.155 | 10.56 | 0.00 | 3.3 | 96.7 | 0.0 | -2.40 | 1.74 | 0.37 | 0.79 | 4.22 | 1671 | 219 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QKK | 14045 | 2022-05-12 | 2021-12-17 | 2.8 | 2.31 | 2.82 | 3.2 | 0.012 | 2.17 | 4.0 | 0.12 | 13.17 | 0.02 | 2.483 | 1.98 | 0.00 | 9.5 | 90.5 | 0.0 | -3.44 | 0.37 | 0.77 | 4.39 | 3.2 | 0.007 | 0.83 | 0.0 | 0.05 | 17.75 | 0.00 | 2.156 | 12.45 | 2.02 | 6.8 | 93.2 | 0.0 | -3.24 | 2.17 | 0.34 | 0.78 | 3.28 | 3537 | 228 | 3 | 0 | 0 | 0 | 1803 | logfile |
✔ | 7M61 | 23686 | 2022-05-12 | 2021-03-25 | 3.8 | 3.83 | — | 4.1 | 0.005 | 1.01 | 0.0 | 0.08 | 12.79 | 0.00 | 2.218 | 23.57 | 0.00 | 14.3 | 85.7 | 0.0 | -4.63 | 0.49 | 0.73 | 2.45 | 3.9 | 0.004 | 0.78 | 0.0 | 0.05 | 14.97 | 0.00 | 2.122 | 21.71 | 1.03 | 14.8 | 85.2 | 0.0 | -4.62 | 0.86 | 0.47 | 0.75 | 2.83 | 1690 | 230 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 6XTB | 10618 | 2022-05-12 | 2020-01-15 | 4.3 | 4.32 | — | 3.9 | 0.006 | 1.17 | 0.0 | 0.07 | 8.68 | 0.00 | 2.369 | 3.00 | 0.00 | 15.6 | 84.4 | 0.0 | -4.66 | 0.32 | 0.43 | — | 4.1 | 0.004 | 1.06 | 0.0 | 0.05 | 7.90 | 0.00 | 2.205 | 9.62 | 0.00 | 22.1 | 77.9 | 0.0 | -5.53 | 2.43 | 0.34 | 0.64 | — | 1161 | 235 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VW2 | 21410 | 2022-05-12 | 2020-02-18 | 3.4 | 3.62 | — | 3.8 | 0.006 | 1.13 | 0.0 | 0.06 | 14.20 | 0.01 | 2.292 | 24.13 | 0.00 | 27.3 | 72.7 | 0.0 | -4.46 | 0.42 | 0.71 | 2.71 | 3.9 | 0.005 | 0.96 | 0.0 | 0.05 | 14.94 | 0.00 | 2.171 | 15.12 | 0.95 | 19.5 | 80.5 | 0.0 | -4.88 | 0.44 | 0.40 | 0.72 | 1.55 | 1800 | 240 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RSQ | 24677 | 2022-05-12 | 2021-08-11 | 3.8 | 4.03 | 3.73 | 4.1 | 0.008 | 0.80 | 0.0 | 0.05 | 12.74 | 0.00 | 2.360 | 4.01 | 2.88 | 3.0 | 97.0 | 0.0 | -0.64 | 0.63 | 0.68 | 1.39 | 4.2 | 0.002 | 0.51 | 0.0 | 0.03 | 15.35 | 0.00 | 2.389 | 2.76 | 0.00 | 2.6 | 97.4 | 0.0 | 2.59 | 1.83 | 0.63 | 0.70 | 1.77 | 3970 | 246 | 1 | 0 | 0 | 0 | 1958 | logfile |
✔ | 7JZU | 22574 | 2022-05-12 | 2020-09-02 | 3.1 | 3.26 | 3.10 | 3.3 | 0.015 | 1.33 | 0.0 | 0.08 | 9.63 | 0.01 | 2.509 | 0.78 | 0.00 | 3.3 | 96.7 | 0.0 | 0.23 | 0.69 | 0.76 | 4.15 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 14.23 | 0.00 | 2.252 | 5.19 | 0.00 | 3.3 | 96.7 | 0.0 | 0.46 | 1.61 | 0.69 | 0.80 | 4.31 | 1987 | 248 | 3 | 0 | 3 | 0 | 0 | logfile |
✔ | 7QKF | 14040 | 2022-05-12 | 2021-12-17 | 2.83 | 2.46 | 2.72 | 2.8 | 0.012 | 2.23 | 2.0 | 0.21 | 13.42 | 0.01 | 2.598 | 0.53 | 0.00 | 8.4 | 91.6 | 0.0 | -2.72 | 0.40 | 0.79 | 6.57 | 2.8 | 0.004 | 1.06 | 0.0 | 0.25 | 17.62 | 0.00 | 2.431 | 6.09 | 2.31 | 3.4 | 96.6 | 0.0 | -3.47 | 1.38 | 0.41 | 0.86 | 6.04 | 3783 | 249 | 6 | 0 | 0 | 0 | 1926 | logfile |
✔ | 7M64 | 23688 | 2022-05-12 | 2021-03-25 | 4.0 | 4.02 | — | 4.3 | 0.008 | 1.15 | 0.0 | 0.07 | 10.07 | 0.00 | 2.451 | 19.77 | 0.00 | 8.7 | 91.3 | 0.0 | -3.84 | 0.52 | 0.75 | — | 4.3 | 0.003 | 0.90 | 0.0 | 0.04 | 11.30 | 0.00 | 2.242 | 6.78 | 0.00 | 5.2 | 94.8 | 0.0 | -4.00 | 1.14 | 0.51 | 0.74 | — | 1850 | 250 | 10 | 0 | 10 | 0 | 0 | logfile |