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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8G7o | 29818 | 2024-03-22 | 2023-02-16 | 3.4 | 3.73 | 3.51 | 3.6 | 0.003 | 0.57 | 0.0 | 0.05 | 14.09 | 0.00 | 2.133 | 3.99 | 0.00 | 2.2 | 97.8 | 0.0 | 1.72 | 0.69 | 0.85 | 2.60 | 3.6 | 0.002 | 0.51 | 0.0 | 0.04 | 14.55 | 0.00 | 2.206 | 4.45 | 1.07 | 1.7 | 98.3 | 0.0 | 1.61 | 0.39 | 0.68 | 0.86 | 2.22 | 33047 | 4389 | 21 | 0 | 7 | 0 | 0 | logfile |
✘ | 6XXD | 10647 | 2024-03-16 | 2020-01-27 | 3.22 | 2.31 | — | 3.1 | 0.007 | 1.05 | 0.0 | 0.06 | 11.45 | 0.00 | 2.647 | 2.40 | 0.00 | 5.7 | 94.3 | 0.0 | -2.51 | 0.70 | 0.68 | 2.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14896 | 2000 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 8GTP | 34261 | 2024-03-21 | 2022-09-08 | 3.1 | 3.47 | 3.25 | 3.4 | 0.009 | 1.09 | 1.0 | 0.08 | 13.84 | 0.01 | 1.912 | 19.57 | 4.36 | 7.8 | 89.5 | 2.7 | -3.18 | 0.69 | 0.71 | 1.46 | 3.4 | 0.003 | 0.68 | 0.0 | 0.05 | 14.74 | 0.00 | 2.116 | 8.41 | 2.56 | 6.7 | 93.2 | 0.1 | -0.65 | 1.42 | 0.71 | 0.81 | 2.22 | 30249 | 3768 | 30 | 0 | 69 | 0 | 0 | logfile |
✔ | 3JAK | 6349 | 2024-03-24 | 2015-06-16 | 3.3 | 3.49 | — | 3.6 | 0.009 | 1.40 | 0.0 | 0.08 | 15.62 | 0.01 | 2.010 | 2.26 | 1.12 | 2.2 | 97.7 | 0.1 | 0.27 | 0.64 | 0.85 | 2.90 | 3.5 | 0.003 | 0.58 | 0.0 | 0.04 | 16.64 | 0.00 | 1.943 | 6.04 | 1.90 | 1.9 | 98.1 | 0.0 | 1.11 | 0.71 | 0.61 | 0.88 | 2.57 | 43066 | 5428 | 26 | 0 | 18 | 0 | 0 | logfile |
✔ | 6VH7 | 21200 | 2024-03-10 | 2020-01-09 | 3.8 | 3.84 | — | 4.1 | 0.007 | 1.03 | 0.0 | 0.05 | 15.14 | 0.01 | 2.318 | 28.35 | 2.13 | 12.4 | 87.6 | 0.0 | -4.78 | 0.54 | 0.62 | 2.62 | 4.0 | 0.003 | 0.76 | 0.0 | 0.05 | 16.82 | 0.00 | 2.300 | 9.42 | 2.48 | 6.8 | 93.2 | 0.0 | -4.21 | 3.67 | 0.59 | 0.67 | 1.69 | 4878 | 642 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8KG8 | 37213 | 2024-03-12 | 2023-08-17 | 4.23 | 6.03 | 4.25 | 4.2 | 0.002 | 0.58 | 0.0 | 0.04 | 14.46 | 0.00 | 1.997 | 13.72 | 0.01 | 4.1 | 95.9 | 0.0 | 0.19 | 0.84 | 0.78 | — | 4.2 | 0.002 | 0.56 | 0.0 | 0.04 | 14.33 | 0.00 | 1.938 | 16.39 | 0.03 | 4.9 | 95.1 | 0.0 | 0.25 | 1.20 | 0.86 | 0.83 | — | 63829 | 7950 | 25 | 25 | 17 | 0 | 0 | logfile |
✔ | 8FKY | 29261 | 2024-03-03 | 2022-12-21 | 2.67 | 2.81 | 2.79 | 1.7 | 0.003 | 0.54 | 0.0 | 0.03 | 20.11 | 0.00 | 1.992 | 1.72 | 0.01 | 1.1 | 98.9 | 0.0 | 1.90 | 0.77 | 0.80 | 3.39 | 1.7 | 0.003 | 0.54 | 0.0 | 0.04 | 20.43 | 0.00 | 1.956 | 5.62 | 1.31 | 2.1 | 97.9 | 0.0 | 1.56 | 0.42 | 0.80 | 0.86 | 3.07 | 158284 | 12402 | 72 | 2810 | 75 | 0 | 0 | logfile |
✔ | 8G7J | 29813 | 2024-03-20 | 2023-02-16 | 3.4 | 3.70 | 3.39 | 3.9 | 0.015 | 1.46 | 0.0 | 0.08 | 9.30 | 0.01 | 2.369 | 1.16 | 0.00 | 0.7 | 99.2 | 0.1 | 0.22 | 0.65 | 0.71 | 1.18 | 3.9 | 0.004 | 0.63 | 0.0 | 0.04 | 13.81 | 0.00 | 2.175 | 5.87 | 1.92 | 3.1 | 96.9 | 0.0 | 1.36 | 2.21 | 0.68 | 0.73 | 1.42 | 27461 | 3682 | 7 | 0 | 0 | 0 | 0 | logfile |
✘ | 8HWG | 35057 | 2024-03-17 | 2022-12-29 | 3.0 | 3.09 | 2.85 | 3.0 | 0.004 | 0.66 | 0.0 | 0.04 | 18.54 | 0.00 | 1.832 | 7.63 | 4.33 | 6.0 | 93.9 | 0.0 | -1.90 | 0.76 | 0.87 | 3.15 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18110 | 2209 | 13 | 6 | 12 | 0 | 0 | logfile |
✔ | 8i95 | 35257 | 2024-03-11 | 2023-02-06 | 2.88 | 3.13 | 2.89 | 3.2 | 0.004 | 0.61 | 0.0 | 0.04 | 14.09 | 0.00 | 2.195 | 7.07 | 1.15 | 5.2 | 94.8 | 0.0 | 0.10 | 0.63 | 0.79 | 3.85 | 3.2 | 0.002 | 0.55 | 0.0 | 0.04 | 14.91 | 0.00 | 2.149 | 7.07 | 2.04 | 4.4 | 95.6 | 0.0 | 0.34 | 0.26 | 0.62 | 0.79 | 3.41 | 8153 | 1121 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 8SP3 | 40673 | 2024-03-17 | 2023-05-01 | 3.52 | 2.50 | 3.58 | 2.2 | 0.003 | 0.62 | 1.0 | 0.04 | 17.32 | 0.01 | 1.632 | 8.08 | 0.00 | 5.1 | 94.9 | 0.0 | -0.38 | 0.69 | 0.66 | 1.58 | 2.2 | 0.004 | 0.66 | 0.0 | 0.04 | 19.01 | 0.00 | 1.964 | 10.54 | 3.40 | 6.5 | 93.5 | 0.0 | -0.54 | 0.63 | 0.70 | 0.67 | 1.31 | 16270 | 1776 | 10 | 82 | 2 | 0 | 0 | logfile |
✔ | 8FKT | 29256 | 2024-03-17 | 2022-12-21 | 2.81 | 2.81 | 2.95 | 2.9 | 0.004 | 0.59 | 0.0 | 0.04 | 19.92 | 0.00 | 1.945 | 1.91 | 0.02 | 1.3 | 98.7 | 0.0 | 1.55 | 0.74 | 0.81 | 3.63 | 2.9 | 0.003 | 0.51 | 0.0 | 0.03 | 20.23 | 0.00 | 1.980 | 5.46 | 1.26 | 1.9 | 98.1 | 0.0 | 1.70 | 0.40 | 0.76 | 0.86 | 3.13 | 134945 | 10797 | 65 | 2347 | 69 | 0 | 0 | logfile |
✔ | 8BXF | 16317 | 2024-03-15 | 2022-12-08 | 3.4 | 3.97 | 3.47 | 3.9 | 0.005 | 0.96 | 0.0 | 0.06 | 13.51 | 0.01 | 2.365 | 5.27 | 0.38 | 4.3 | 95.7 | 0.0 | -2.13 | 0.67 | 0.81 | 3.05 | 3.9 | 0.002 | 0.63 | 0.0 | 0.04 | 15.07 | 0.00 | 2.190 | 9.36 | 1.82 | 3.1 | 96.9 | 0.0 | 0.22 | 0.89 | 0.69 | 0.84 | 1.95 | 12692 | 1630 | 10 | 0 | 5 | 0 | 0 | logfile |
✔ | 7YBi | 33722 | 2024-03-20 | 2022-06-29 | 4.1 | 4.25 | 4.13 | 4.1 | 0.004 | 0.66 | 0.0 | 0.05 | 15.19 | 0.00 | 2.038 | 11.91 | 0.21 | 3.8 | 96.1 | 0.1 | -0.90 | 0.77 | 0.78 | — | 4.1 | 0.005 | 0.68 | 0.0 | 0.05 | 13.16 | 0.00 | 2.059 | 15.30 | 0.07 | 6.5 | 93.5 | 0.0 | -0.94 | 0.40 | 0.77 | 0.79 | — | 26649 | 3241 | 35 | 0 | 95 | 0 | 0 | logfile |
✔ | 8FLA | 29272 | 2024-03-02 | 2022-12-21 | 2.63 | 2.81 | 2.75 | 2.9 | 0.007 | 0.74 | 0.0 | 0.04 | 21.91 | 0.02 | 1.946 | 2.05 | 0.00 | 1.2 | 98.8 | 0.0 | 1.16 | 0.85 | 0.85 | 3.77 | 2.9 | 0.004 | 0.72 | 2.0 | 0.03 | 22.17 | 0.01 | 1.926 | 5.92 | 2.12 | 1.9 | 98.1 | 0.0 | 1.30 | 0.47 | 0.85 | 0.87 | 3.47 | 153309 | 9002 | 72 | 3767 | 95 | 0 | 0 | logfile |
✔ | 7PLV | 13503 | 2024-03-14 | 2021-09-01 | 3.5 | 4.06 | 3.57 | 3.5 | 0.005 | 0.81 | 0.0 | 0.05 | 15.02 | 0.01 | 1.322 | 4.61 | 0.00 | 0.4 | 99.6 | 0.0 | -1.54 | 0.91 | 0.83 | 3.00 | 3.5 | 0.003 | 0.64 | 0.0 | 0.04 | 15.62 | 0.00 | 2.121 | 7.59 | 0.92 | 1.4 | 98.6 | 0.0 | 1.74 | 0.70 | 0.92 | 0.86 | 2.49 | 10139 | 1263 | 5 | 0 | 3 | 0 | 0 | logfile |
✔ | 7YVE | 34124 | 2024-03-21 | 2022-08-19 | 3.4 | 3.90 | 3.37 | 3.7 | 0.017 | 1.24 | 2.0 | 0.07 | 13.19 | 0.01 | 1.983 | 11.38 | 1.49 | 5.0 | 94.6 | 0.4 | -2.34 | 0.83 | 0.87 | 3.72 | 3.7 | 0.003 | 0.63 | 0.0 | 0.04 | 13.94 | 0.00 | 2.218 | 7.19 | 3.24 | 5.6 | 94.4 | 0.0 | -0.20 | 0.50 | 0.83 | 0.88 | 3.20 | 29009 | 3768 | 12 | 0 | 37 | 0 | 0 | logfile |
✔ | 8G4M | 29725 | 2024-03-18 | 2023-02-10 | 2.95 | 3.53 | 2.95 | 3.3 | 0.004 | 0.64 | 0.0 | 0.05 | 18.25 | 0.00 | 2.132 | 4.25 | 2.43 | 2.2 | 97.8 | 0.0 | 0.60 | 0.80 | 0.88 | 3.59 | 3.3 | 0.004 | 0.61 | 0.0 | 0.04 | 15.47 | 0.00 | 2.170 | 5.95 | 2.09 | 2.1 | 97.9 | 0.0 | 0.58 | 0.33 | 0.82 | 0.90 | 3.46 | 20584 | 2432 | 61 | 0 | 119 | 0 | 0 | logfile |
✘ | 7PMA | 13526 | 2024-03-14 | 2021-09-02 | 3.6 | 4.07 | 3.61 | 3.5 | 0.004 | 0.88 | 1.0 | 0.05 | 15.93 | 0.01 | 1.317 | 6.45 | 0.09 | 0.2 | 99.8 | 0.0 | -1.07 | 0.90 | 0.82 | 2.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10066 | 1249 | 6 | 0 | 5 | 0 | 0 | logfile |
✔ | 8T1D | 40960 | 2024-03-18 | 2023-06-02 | 3.35 | 3.74 | 3.50 | 3.7 | 0.027 | 1.47 | 0.0 | 0.21 | 12.77 | 0.01 | 2.170 | 6.09 | 0.72 | 12.2 | 87.1 | 0.6 | -5.63 | 0.57 | 0.77 | 2.57 | 3.7 | 0.007 | 1.24 | 0.0 | 0.10 | 15.84 | 0.01 | 1.916 | 21.29 | 4.03 | 11.9 | 87.4 | 0.7 | -3.29 | 0.70 | 0.57 | 0.81 | 2.32 | 20338 | 2502 | 8 | 0 | 4 | 0 | 0 | logfile |