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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6RiE | 4890 | 2022-12-21 | 2019-04-23 | 3.1 | 3.16 | 2.97 | 3.1 | 0.006 | 0.76 | 0.0 | 0.05 | 15.00 | 0.01 | 2.067 | 4.46 | 0.07 | 4.2 | 95.8 | 0.0 | -3.21 | 0.80 | 0.85 | 3.51 | 3.1 | 0.004 | 0.55 | 0.0 | 0.04 | 16.03 | 0.00 | 1.405 | 8.01 | 0.12 | 3.6 | 96.4 | 0.0 | -0.19 | 0.38 | 0.82 | 0.87 | 3.19 | 36583 | 4418 | 17 | 41 | 7 | 0 | 0 | logfile |
✔ | 6i2N | 0333 | 2022-12-14 | 2018-11-01 | 3.3 | 3.45 | 3.33 | 3.4 | 0.007 | 0.97 | 0.0 | 0.05 | 11.09 | 0.01 | 2.323 | 2.82 | 0.00 | 6.0 | 94.0 | 0.0 | -3.81 | 0.75 | 0.79 | 2.55 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 14.79 | 0.00 | 2.134 | 8.41 | 0.39 | 4.5 | 95.5 | 0.0 | 0.62 | 2.27 | 0.77 | 0.84 | 1.84 | 18970 | 2352 | 14 | 21 | 0 | 0 | 0 | logfile |
✔ | 6SKY | 10231 | 2022-12-14 | 2019-08-16 | 2.8 | 2.95 | — | 3.0 | 0.009 | 0.69 | 0.0 | 0.05 | 13.80 | 0.00 | 2.077 | 5.12 | 3.63 | 4.2 | 95.8 | 0.0 | -2.12 | 0.75 | 0.85 | 2.69 | 3.0 | 0.003 | 0.52 | 0.0 | 0.04 | 16.48 | 0.00 | 2.102 | 5.19 | 2.81 | 2.1 | 97.9 | 0.0 | 1.58 | 2.20 | 0.73 | 0.85 | 2.38 | 22348 | 2824 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 6MPH | 9189 | 2022-12-16 | 2018-10-06 | 3.8 | 4.28 | — | 3.9 | 0.006 | 0.79 | 0.0 | 0.05 | 12.56 | 0.01 | 2.286 | 6.16 | 6.01 | 5.3 | 94.6 | 0.2 | -3.46 | 0.84 | 0.85 | 2.34 | 3.9 | 0.003 | 0.70 | 0.0 | 0.04 | 14.24 | 0.00 | 2.068 | 13.92 | 0.33 | 5.2 | 94.8 | 0.0 | -1.06 | 0.76 | 0.84 | 0.85 | 2.02 | 32092 | 3843 | 72 | 0 | 155 | 0 | 0 | logfile |
✔ | 6MWQ | 9277 | 2022-12-14 | 2018-10-30 | 3.0 | 3.33 | 2.89 | 3.1 | 0.001 | 0.36 | 0.0 | 0.04 | 4.66 | 0.00 | 2.321 | 4.19 | 0.13 | 11.0 | 87.5 | 1.5 | -4.81 | 0.54 | 0.39 | 0.22 | 3.1 | 0.003 | 0.70 | 0.0 | 0.04 | 13.25 | 0.00 | 2.183 | 8.34 | 1.48 | 3.6 | 96.1 | 0.2 | -1.09 | 1.31 | 0.77 | 0.86 | 1.70 | 22072 | 2873 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N1V | 9319 | 2022-12-19 | 2018-11-12 | 4.0 | 4.63 | — | 4.2 | 0.008 | 0.96 | 0.0 | 0.06 | 15.13 | 0.01 | 2.226 | 8.06 | 10.74 | 6.7 | 93.1 | 0.2 | -2.97 | 0.79 | 0.72 | — | 4.2 | 0.003 | 0.69 | 0.0 | 0.05 | 14.86 | 0.00 | 2.129 | 13.02 | 0.29 | 6.9 | 93.0 | 0.1 | -1.16 | 1.70 | 0.86 | 0.86 | — | 36498 | 4470 | 69 | 0 | 144 | 0 | 0 | logfile |
✔ | 5AN9 | 3145 | 2022-12-20 | 2015-09-06 | 3.3 | 3.29 | — | 3.3 | 0.007 | 1.22 | 5.0 | 0.10 | 17.04 | 0.01 | 1.192 | 3.57 | 2.32 | 9.1 | 88.0 | 2.9 | -3.68 | 0.38 | 0.81 | 1.98 | 3.3 | 0.007 | 0.87 | 0.0 | 0.05 | 17.57 | 0.01 | 2.003 | 13.84 | 1.16 | 11.8 | 87.5 | 0.6 | -2.88 | 1.53 | 0.40 | 0.81 | 1.34 | 39693 | 1905 | 11 | 1162 | 0 | 0 | 0 | logfile |
✘ | 5YKG | 6833 | 2022-12-22 | 2017-10-14 | 4.57 | 4.68 | 4.39 | 4.4 | 0.005 | 0.71 | 4.0 | 0.04 | 13.41 | 0.01 | 2.245 | 13.43 | 7.90 | 4.2 | 95.6 | 0.1 | -2.42 | 0.73 | 0.73 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 50868 | 6536 | 16 | 0 | 12 | 0 | 0 | logfile |
✔ | 6ME0 | 9105 | 2022-12-14 | 2018-09-05 | 3.6 | 3.74 | — | 3.6 | 0.010 | 1.16 | 0.0 | 0.05 | 17.63 | 0.01 | 1.531 | 13.75 | 0.00 | 11.8 | 88.2 | 0.0 | -5.11 | 0.89 | 0.81 | 2.89 | 3.6 | 0.005 | 0.67 | 0.0 | 0.03 | 17.39 | 0.00 | 1.842 | 19.43 | 0.28 | 13.2 | 86.8 | 0.0 | -2.26 | 1.22 | 0.89 | 0.82 | 2.07 | 21539 | 414 | 4 | 845 | 33 | 0 | 0 | logfile |
✔ | 6T9L | 10415 | 2022-12-14 | 2019-10-28 | 3.6 | 3.74 | 3.53 | 3.6 | 0.002 | 0.47 | 0.0 | 0.03 | 22.54 | 0.00 | 2.136 | 7.14 | 0.07 | 1.1 | 98.9 | 0.0 | -1.63 | 0.74 | 0.68 | 0.82 | 3.6 | 0.004 | 0.64 | 0.0 | 0.04 | 25.05 | 0.00 | 1.954 | 9.36 | 0.30 | 3.3 | 96.7 | 0.0 | 0.94 | 0.83 | 0.84 | 0.84 | 1.19 | 18157 | 1532 | 18 | 290 | 8 | 0 | 0 | logfile |
✔ | 5ANB | 3146 | 2022-12-22 | 2015-09-06 | 4.1 | 4.11 | — | 4.1 | 0.008 | 1.31 | 6.0 | 0.10 | 18.54 | 0.01 | 1.245 | 5.13 | 4.33 | 13.0 | 83.9 | 3.1 | -4.17 | 0.41 | 0.75 | — | 4.0 | 0.004 | 0.83 | 0.0 | 0.04 | 17.28 | 0.01 | 2.089 | 19.99 | 0.04 | 13.7 | 85.6 | 0.7 | -3.60 | 0.89 | 0.40 | 0.72 | — | 48493 | 3025 | 12 | 1162 | 0 | 0 | 0 | logfile |
✔ | 6K15 | 9905 | 2022-12-14 | 2019-05-09 | 3.4 | 3.68 | — | 3.6 | 0.005 | 0.96 | 0.0 | 0.05 | 10.23 | 0.01 | 1.639 | 5.00 | 0.33 | 8.6 | 91.3 | 0.1 | -4.21 | 0.74 | 0.78 | 2.17 | 3.6 | 0.003 | 0.68 | 0.0 | 0.04 | 14.97 | 0.00 | 2.132 | 10.19 | 0.21 | 8.1 | 91.9 | 0.0 | -0.23 | 1.75 | 0.76 | 0.81 | 1.25 | 21486 | 2655 | 14 | 0 | 1 | 0 | 0 | logfile |
✔ | 6VPP | 21315 | 2022-12-12 | 2020-02-04 | 4.4 | 5.69 | — | 5.4 | 0.005 | 0.96 | 0.0 | 0.05 | 15.79 | 0.01 | 2.087 | 11.75 | 0.30 | 5.2 | 94.7 | 0.1 | -4.45 | 0.71 | 0.79 | — | 5.4 | 0.003 | 0.69 | 0.0 | 0.04 | 14.69 | 0.00 | 1.955 | 18.84 | 0.00 | 5.2 | 94.8 | 0.0 | -1.01 | 1.72 | 0.70 | 0.79 | — | 9156 | 1164 | 5 | 1 | 2 | 0 | 0 | logfile |
✔ | 6GY6 | 0088 | 2022-12-14 | 2018-06-28 | 4.0 | 3.98 | — | 3.8 | 0.006 | 0.88 | 0.0 | 0.05 | 10.55 | 0.01 | 2.234 | 4.84 | 1.08 | 2.6 | 97.4 | 0.0 | -4.40 | 0.90 | 0.84 | — | 3.8 | 0.003 | 0.65 | 0.0 | 0.04 | 14.61 | 0.00 | 2.139 | 11.29 | 0.27 | 2.0 | 98.0 | 0.0 | 2.55 | 0.93 | 0.90 | 0.85 | — | 72462 | 9139 | 26 | 0 | 0 | 0 | 0 | logfile |
✔ | 5ANC | 3147 | 2022-12-21 | 2015-09-06 | 4.2 | 4.23 | — | 4.2 | 0.008 | 1.35 | 7.0 | 0.10 | 19.00 | 0.01 | 1.236 | 6.63 | 4.21 | 13.6 | 82.7 | 3.6 | -4.33 | 0.41 | 0.74 | — | 4.2 | 0.004 | 0.83 | 0.0 | 0.04 | 17.25 | 0.01 | 2.031 | 20.61 | 0.00 | 14.5 | 84.5 | 1.0 | -3.66 | 1.57 | 0.39 | 0.70 | — | 46807 | 2801 | 11 | 1162 | 0 | 0 | 0 | logfile |
✔ | 5VHY | 8687 | 2022-12-15 | 2017-04-13 | 4.6 | 4.98 | — | 4.7 | 0.007 | 1.12 | 0.0 | 0.04 | 8.34 | 0.01 | 1.831 | 19.00 | 0.17 | 5.2 | 93.0 | 1.8 | -1.87 | 0.77 | 0.64 | — | 4.7 | 0.003 | 0.64 | 0.0 | 0.04 | 11.47 | 0.00 | 2.141 | 13.97 | 0.00 | 4.0 | 95.7 | 0.3 | 0.76 | 5.51 | 0.84 | 0.84 | — | 27572 | 3484 | 10 | 0 | 8 | 0 | 0 | logfile |
✘ | 3JD6 | 6425 | 2022-12-21 | 2016-04-12 | 4.1 | 5.00 | — | 4.6 | 0.026 | 2.70 | 34.0 | 0.12 | 14.71 | 0.02 | 0.000 | 5.64 | 0.00 | 13.3 | 86.1 | 0.6 | -3.14 | 0.59 | 0.40 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 45781 | 2839 | 17 | 0 | 0 | 0 | 22542 | logfile |
✔ | 6Kio | 9996 | 2022-12-13 | 2019-07-19 | 3.94 | 4.22 | — | 3.9 | 0.035 | 3.43 | 48.0 | 0.22 | 17.77 | 0.04 | 2.231 | 11.34 | 8.39 | 18.6 | 74.1 | 7.3 | -6.45 | 0.56 | 0.66 | 1.26 | 3.8 | 0.003 | 0.72 | 0.0 | 0.04 | 17.11 | 0.00 | 2.004 | 11.80 | 0.12 | 7.1 | 92.5 | 0.4 | -1.30 | 1.67 | 0.65 | 0.77 | 1.34 | 15091 | 968 | 3 | 0 | 0 | 0 | 7442 | logfile |
✔ | 6ND1 | 0440 | 2022-12-12 | 2018-12-13 | 4.1 | 4.15 | — | 4.1 | 0.009 | 1.23 | 14.0 | 0.08 | 16.24 | 0.01 | 2.249 | 7.63 | 0.10 | 3.7 | 96.2 | 0.2 | -3.89 | 0.60 | 0.82 | — | 4.1 | 0.003 | 0.70 | 0.0 | 0.04 | 14.75 | 0.00 | 2.085 | 7.69 | 0.00 | 3.6 | 96.4 | 0.0 | 0.48 | 0.70 | 0.59 | 0.81 | — | 9186 | 1179 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6AV9 | 7007 | 2022-12-12 | 2017-09-01 | 3.9 | 3.83 | — | 3.8 | 0.008 | 1.11 | 0.0 | 0.06 | 12.77 | 0.01 | 1.920 | 32.37 | 0.33 | 12.8 | 86.8 | 0.4 | -4.62 | 0.58 | 0.80 | 2.42 | 3.8 | 0.004 | 0.93 | 0.0 | 0.05 | 16.01 | 0.00 | 2.138 | 16.79 | 0.87 | 11.0 | 88.8 | 0.3 | -2.09 | 1.27 | 0.58 | 0.79 | 1.32 | 8673 | 1101 | 6 | 0 | 3 | 0 | 0 | logfile |