Table showing results for October 2021

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	6S91	10126	2021-10-04	2019-07-11	2.68	3.17	2.85	3.0	0.006	0.78	0.0	0.05	14.80	0.00	1.696	19.71	0.09	13.5	86.3	0.2	-4.91	0.69	0.74	2.17	3.1	0.008	0.99	0.0	0.05	17.23	0.01	1.734	19.22	3.35	10.9	89.1	0.0	-2.73	0.69	0.69	0.82	1.84	62045	7488	36	84	6	0	0	logfile
✔	6S8B	10117	2021-10-04	2019-07-09	2.41	3.08	2.65	3.0	0.006	0.78	0.0	0.05	14.25	0.00	1.698	17.44	0.19	15.0	84.6	0.4	-4.57	0.72	0.78	2.94	3.0	0.005	0.86	0.0	0.05	16.91	0.01	1.800	15.94	2.22	11.8	88.2	0.1	-2.51	1.08	0.70	0.84	2.34	62151	7479	35	93	6	0	0	logfile
✘	6WBN	21594	2021-10-07	2020-03-26	2.83	3.46	—	3.1	0.024	1.22	0.0	0.51	16.38	0.00	1.202	12.55	0.80	4.5	95.5	0.0	-0.59	0.78	0.82	3.00	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	38402	4774	28	0	84	0	0	logfile
✔	6oJQ	20092	2021-10-05	2019-04-12	3.67	3.91	—	3.8	0.008	0.78	0.0	0.04	10.32	0.00	2.000	3.54	0.00	4.0	96.0	0.0	-3.02	0.57	0.74	2.96	3.8	0.003	0.53	0.0	0.04	12.96	0.00	1.918	8.19	0.10	3.5	96.5	0.0	-0.53	2.74	0.66	0.82	3.08	18055	1164	5	0	4	0	8878	logfile
✔	6ZQN	11369	2021-10-06	2020-07-10	4.0	3.59	—	3.5	0.008	0.82	0.0	0.12	14.87	0.00	1.537	13.03	0.02	8.6	91.4	0.0	-1.45	0.69	0.77	—	3.5	0.003	0.55	0.0	0.04	15.61	0.00	1.834	9.15	0.17	4.5	95.5	0.0	0.20	0.41	0.69	0.77	—	80631	5165	42	0	16	17	40551	logfile
✔	6ZPo	11342	2021-10-06	2020-07-09	4.0	3.38	—	3.3	0.007	0.79	0.0	0.12	15.22	0.00	1.497	9.97	0.00	6.0	94.0	0.0	-0.81	0.67	0.75	—	3.3	0.004	0.57	0.0	0.04	16.23	0.00	1.783	8.01	0.26	4.7	95.3	0.0	0.16	0.42	0.67	0.76	—	80353	5150	42	0	16	17	40405	logfile
✔	6WTH	21896	2021-10-03	2020-05-02	3.06	3.56	3.08	3.4	0.002	0.54	0.0	0.04	6.83	0.00	2.217	4.94	0.84	2.2	97.8	0.0	-3.50	0.72	0.75	3.88	3.4	0.003	0.52	0.0	0.04	12.50	0.00	2.207	7.09	0.19	3.9	96.1	0.0	-0.58	0.59	0.78	0.87	3.63	11740	1183	12	0	422	0	0	logfile
✔	6WU2	21903	2021-10-04	2020-05-04	3.36	3.76	3.55	3.7	0.010	0.72	0.0	0.05	14.78	0.00	2.074	6.54	0.76	7.8	92.0	0.2	-3.14	0.61	0.86	3.65	3.7	0.003	0.59	0.0	0.04	15.98	0.00	2.026	8.47	0.00	5.6	94.1	0.2	0.82	0.65	0.61	0.87	2.45	15404	978	4	0	10	0	7812	logfile
✔	6WWZ	21950	2021-10-03	2020-05-09	3.34	3.53	—	3.5	0.014	1.77	0.0	0.09	13.13	0.00	2.318	2.02	0.10	4.4	95.6	0.0	-3.33	0.56	0.77	2.93	3.5	0.004	0.63	0.0	0.04	15.09	0.00	2.180	2.81	0.00	2.8	97.2	0.0	0.19	1.07	0.72	0.86	2.83	9450	1211	6	0	0	0	0	logfile
✔	6W6V	21564	2021-10-05	2020-03-17	3.0	3.67	—	3.6	0.004	0.63	0.0	0.04	14.19	0.00	2.092	6.61	0.05	10.9	89.1	0.0	-2.45	0.70	0.81	2.34	3.6	0.005	0.75	0.0	0.04	15.93	0.00	1.544	8.53	1.53	9.1	90.9	0.0	-1.49	0.89	0.71	0.83	1.94	24850	2306	11	294	0	0	0	logfile
✔	6VN1	21247	2021-10-06	2020-01-29	2.8	2.97	2.75	3.0	0.006	0.63	0.0	0.05	13.28	0.00	2.123	7.52	0.00	6.3	93.7	0.0	-3.36	0.70	0.80	3.79	3.0	0.004	0.66	0.0	0.05	16.03	0.00	2.170	7.03	2.59	6.3	93.7	0.0	-1.16	0.45	0.74	0.83	3.44	19524	2454	9	0	0	0	0	logfile
✔	6ZoK	11321	2021-10-07	2020-07-07	2.8	2.96	2.77	2.9	0.003	0.52	0.0	0.03	14.36	0.00	1.989	4.02	1.48	2.2	97.8	0.0	0.55	0.74	0.86	4.30	2.9	0.006	0.66	0.0	0.04	15.98	0.01	1.865	4.19	2.50	2.9	97.1	0.0	0.58	1.57	0.77	0.91	4.00	50192	2970	26	1232	110	0	0	logfile
✔	7C7A	30297	2021-10-05	2020-05-24	2.8	3.32	—	3.1	0.002	0.58	0.0	0.04	14.30	0.00	2.157	8.77	0.04	5.9	94.0	0.1	-2.84	0.79	0.71	0.74	3.1	0.009	0.88	0.0	0.04	16.50	0.01	2.004	12.22	2.79	6.5	93.5	0.0	-0.34	0.96	0.85	0.82	1.26	27500	2519	16	339	4	0	0	logfile
✔	6ZNL	11313	2021-10-03	2020-07-06	3.8	4.07	3.64	3.8	0.014	1.87	3.0	0.09	14.11	0.00	1.790	2.71	0.02	5.8	94.0	0.2	-2.54	0.78	0.70	1.46	3.8	0.005	0.81	1.0	0.04	15.72	0.00	1.823	10.98	0.17	3.7	96.3	0.1	0.68	1.61	0.86	0.84	1.57	52864	7001	34	0	13	0	0	logfile
✔	6Z43	11068	2021-10-05	2020-05-22	3.3	3.43	—	3.4	0.005	0.56	0.0	0.05	10.79	0.00	2.094	4.17	0.68	3.5	96.5	0.0	-0.78	0.78	0.84	3.41	3.4	0.005	0.73	0.0	0.04	13.48	0.00	2.110	8.22	0.04	2.9	97.1	0.0	0.58	1.34	0.80	0.88	2.57	26725	3351	29	0	66	0	0	logfile
✔	7C8K	30306	2021-10-03	2020-06-02	3.2	3.18	—	3.1	0.002	0.49	0.0	0.04	13.54	0.00	2.001	4.88	0.00	3.2	96.8	0.0	-1.52	0.82	0.78	2.09	3.2	0.004	0.63	0.0	0.04	15.58	0.00	2.216	9.44	0.40	4.5	95.5	0.0	1.25	1.13	0.85	0.83	2.99	4853	596	3	0	6	0	0	logfile
✔	6W20	21520	2021-10-07	2020-03-04	3.0	3.80	—	3.5	0.009	0.87	0.0	0.04	14.42	0.00	2.144	13.34	1.55	3.1	96.9	0.1	-1.49	0.86	0.86	2.72	3.5	0.003	0.60	0.0	0.04	15.94	0.00	2.084	9.79	2.29	3.1	96.9	0.0	0.88	0.55	0.87	0.89	2.70	48206	6110	27	0	35	0	0	logfile
✔	6W24	21524	2021-10-05	2020-03-04	3.4	3.93	—	3.6	0.006	0.83	0.0	0.04	13.88	0.00	1.977	17.96	0.62	3.2	96.5	0.3	-1.89	0.74	0.74	1.87	3.6	0.002	0.62	0.0	0.04	14.68	0.00	2.131	10.53	0.14	3.1	96.9	0.0	0.80	1.51	0.77	0.86	2.26	27327	3435	13	0	36	0	0	logfile
✔	6ZQJ	11366	2021-10-04	2020-07-09	4.2	3.97	4.23	4.3	0.002	0.55	0.0	0.04	12.29	0.00	2.286	6.10	1.55	2.9	97.0	0.1	-2.13	0.67	0.75	—	4.2	0.003	0.83	0.0	0.05	13.73	0.00	2.126	11.09	0.06	4.9	95.1	0.0	-0.73	2.03	0.69	0.79	—	15096	1965	12	0	3	0	0	logfile
✔	6ZQi	11364	2021-10-03	2020-07-09	3.8	4.13	3.63	4.1	0.002	0.56	0.0	0.04	12.40	0.00	2.336	5.73	1.12	3.1	96.9	0.0	-2.14	0.67	0.78	0.85	4.1	0.004	0.81	0.0	0.05	15.67	0.00	2.130	12.37	0.37	5.5	94.5	0.0	-0.87	0.75	0.69	0.80	1.33	5032	655	4	0	1	0	0	logfile

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