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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7U6o | 26377 | 2023-08-20 | 2022-03-04 | 3.2 | 4.03 | 3.21 | 3.6 | 0.003 | 0.58 | 0.0 | 0.04 | 13.73 | 0.00 | 2.152 | 17.72 | 0.06 | 3.9 | 96.1 | 0.0 | 0.12 | 0.85 | 0.79 | 1.37 | 3.7 | 0.004 | 0.71 | 0.0 | 0.04 | 15.09 | 0.00 | 2.060 | 20.03 | 0.06 | 3.5 | 96.5 | 0.0 | 0.60 | 0.43 | 0.86 | 0.81 | 1.14 | 29424 | 3816 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 8DDW | 27344 | 2023-08-18 | 2022-06-19 | 4.7 | 4.19 | 4.62 | 4.0 | 0.003 | 0.53 | 0.0 | 0.04 | 14.47 | 0.00 | 2.179 | 11.42 | 8.35 | 5.4 | 94.5 | 0.1 | 0.15 | 0.72 | 0.61 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25869 | 3198 | 10 | 0 | 68 | 0 | 0 | logfile |
✔ | 7W7T | 32347 | 2023-08-10 | 2021-12-06 | 3.4 | 2.93 | 3.31 | 3.4 | 0.003 | 0.63 | 0.0 | 0.04 | 13.40 | 0.00 | 2.069 | 10.32 | 0.11 | 2.9 | 97.1 | 0.0 | 0.71 | 0.57 | 0.70 | 1.45 | 3.4 | 0.003 | 0.60 | 0.0 | 0.04 | 15.60 | 0.00 | 2.053 | 9.56 | 0.34 | 3.7 | 96.3 | 0.0 | -0.12 | 1.82 | 0.58 | 0.73 | 1.21 | 7903 | 1021 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7VXD | 32176 | 2023-08-21 | 2021-11-12 | 4.0 | 4.60 | — | 4.2 | 0.003 | 0.50 | 0.0 | 0.04 | 7.89 | 0.00 | 2.091 | 7.52 | 0.03 | 4.0 | 95.9 | 0.2 | -2.30 | 0.70 | 0.65 | — | 4.3 | 0.003 | 0.73 | 0.0 | 0.04 | 14.17 | 0.00 | 2.102 | 16.36 | 0.45 | 4.0 | 96.0 | 0.0 | -0.78 | 1.63 | 0.74 | 0.74 | — | 30194 | 3829 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UZZ | 26923 | 2023-08-16 | 2022-05-09 | 4.45 | 6.04 | 4.45 | 4.4 | 0.008 | 0.98 | 0.0 | 0.06 | 12.58 | 0.00 | 1.424 | 17.03 | 0.75 | 5.0 | 95.0 | 0.0 | -0.66 | 0.84 | 0.70 | — | 4.4 | 0.003 | 0.58 | 0.0 | 0.04 | 12.99 | 0.00 | 2.131 | 14.09 | 0.05 | 3.4 | 96.6 | 0.0 | 0.63 | 2.36 | 0.91 | 0.83 | — | 19967 | 2380 | 11 | 30 | 0 | 0 | 0 | logfile |
✔ | 7W7U | 32348 | 2023-08-10 | 2021-12-06 | 3.0 | 2.54 | 2.92 | 2.9 | 0.003 | 0.56 | 0.0 | 0.04 | 12.54 | 0.00 | 1.966 | 7.56 | 0.00 | 2.6 | 97.4 | 0.0 | 0.77 | 0.59 | 0.77 | 1.85 | 3.0 | 0.003 | 0.56 | 0.0 | 0.04 | 16.36 | 0.00 | 2.048 | 8.38 | 2.32 | 3.0 | 97.0 | 0.0 | 0.46 | 1.31 | 0.60 | 0.80 | 1.76 | 7833 | 1015 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7YAC | 33708 | 2023-08-11 | 2022-06-27 | 3.24 | 2.68 | 3.20 | 3.0 | 0.003 | 0.77 | 0.0 | 0.04 | 14.58 | 0.00 | 2.235 | 6.23 | 0.00 | 3.9 | 96.1 | 0.0 | 0.07 | 0.65 | 0.79 | 2.16 | 3.0 | 0.002 | 0.60 | 0.0 | 0.04 | 16.62 | 0.00 | 2.219 | 7.08 | 0.31 | 4.8 | 95.2 | 0.0 | -0.05 | 1.26 | 0.65 | 0.81 | 1.87 | 8937 | 1140 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7RTV | 24690 | 2023-08-09 | 2021-08-15 | 3.96 | 4.06 | — | 4.1 | 0.004 | 0.76 | 0.0 | 0.05 | 14.21 | 0.00 | 2.207 | 14.04 | 0.32 | 2.8 | 97.2 | 0.0 | 3.61 | 0.41 | 0.63 | 0.10 | 4.1 | 0.004 | 0.91 | 0.0 | 0.04 | 16.58 | 0.00 | 2.168 | 18.02 | 0.32 | 3.3 | 96.7 | 0.0 | 2.73 | 1.76 | 0.41 | 0.64 | 0.28 | 2881 | 366 | 3 | 0 | 6 | 0 | 0 | logfile |
✔ | 7ZN2 | 14799 | 2023-08-21 | 2022-04-20 | 4.29 | 3.73 | 4.16 | 3.5 | 0.003 | 0.52 | 0.0 | 0.04 | 13.12 | 0.00 | 2.048 | 7.87 | 0.00 | 3.5 | 96.5 | 0.0 | -1.30 | 0.80 | 0.72 | — | 3.3 | 0.003 | 0.62 | 0.0 | 0.04 | 12.96 | 0.00 | 2.077 | 13.72 | 0.00 | 3.9 | 96.1 | 0.0 | -1.13 | 2.07 | 0.84 | 0.80 | — | 89393 | 11481 | 36 | 0 | 0 | 0 | 0 | logfile |
✔ | 6G51 | 4350 | 2023-08-27 | 2018-03-28 | 4.1 | 4.42 | — | 4.0 | 0.007 | 1.44 | 22.0 | 0.10 | 21.21 | 0.00 | 0.264 | 3.79 | 0.00 | 7.0 | 92.3 | 0.8 | -2.90 | 0.71 | 0.63 | — | 3.9 | 0.005 | 0.87 | 0.0 | 0.04 | 22.63 | 0.00 | 1.977 | 12.39 | 0.00 | 13.4 | 86.5 | 0.1 | -2.16 | 1.66 | 0.81 | 0.69 | — | 50662 | 6237 | 38 | 1659 | 0 | 0 | 0 | logfile |
✔ | 7W7W | 32350 | 2023-08-10 | 2021-12-06 | 3.2 | 2.98 | 3.22 | 3.2 | 0.003 | 1.16 | 0.0 | 0.04 | 13.44 | 0.00 | 2.051 | 8.21 | 0.00 | 2.9 | 97.1 | 0.0 | 0.82 | 0.59 | 0.74 | 2.05 | 3.2 | 0.002 | 0.84 | 0.0 | 0.04 | 15.74 | 0.00 | 1.537 | 8.97 | 0.23 | 3.9 | 96.1 | 0.0 | 0.72 | 0.38 | 0.58 | 0.75 | 1.99 | 7870 | 1018 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7W9C | 32364 | 2023-08-20 | 2021-12-09 | 3.2 | 3.43 | — | 3.5 | 0.004 | 0.61 | 0.0 | 0.04 | 12.69 | 0.00 | 2.079 | 1.76 | 0.00 | 2.8 | 97.2 | 0.0 | -3.72 | 0.64 | 0.69 | 2.04 | 3.4 | 0.003 | 0.60 | 0.0 | 0.04 | 15.92 | 0.00 | 2.159 | 8.97 | 0.30 | 3.2 | 96.8 | 0.0 | -0.17 | 1.46 | 0.67 | 0.76 | 1.63 | 29737 | 3777 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 6G53 | 4351 | 2023-08-27 | 2018-03-28 | 4.5 | 4.86 | — | 4.3 | 0.007 | 1.44 | 21.0 | 0.10 | 21.32 | 0.00 | 1.260 | 2.52 | 0.00 | 7.1 | 92.2 | 0.7 | -2.88 | 0.67 | 0.54 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 49052 | 5912 | 37 | 1659 | 0 | 0 | 0 | logfile |
✔ | 6PPF | 20435 | 2023-08-17 | 2019-07-06 | 3.4 | 3.48 | — | 3.4 | 0.006 | 0.88 | 13.0 | 0.05 | 19.21 | 0.00 | 1.152 | 14.99 | 7.36 | 9.0 | 90.1 | 0.9 | -4.80 | 0.73 | 0.73 | 1.38 | 3.4 | 0.003 | 0.62 | 0.0 | 0.03 | 18.42 | 0.00 | 2.051 | 10.74 | 0.52 | 7.0 | 92.9 | 0.1 | -2.46 | 0.66 | 0.81 | 0.82 | 1.58 | 71835 | 2101 | 22 | 2583 | 0 | 13 | 0 | logfile |
✔ | 7Ni2 | 12349 | 2023-08-21 | 2021-02-11 | 2.89 | 3.11 | — | 3.0 | 0.007 | 0.70 | 0.0 | 0.05 | 11.38 | 0.00 | 2.198 | 11.77 | 0.00 | 3.2 | 96.8 | 0.0 | -1.51 | 0.78 | 0.86 | 2.96 | 3.0 | 0.003 | 0.69 | 0.0 | 0.05 | 14.58 | 0.00 | 2.200 | 9.45 | 1.39 | 3.2 | 96.8 | 0.0 | 0.40 | 0.49 | 0.77 | 0.88 | 2.31 | 31344 | 4080 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UWQ | 26838 | 2023-08-16 | 2022-05-03 | 3.05 | 3.55 | 3.19 | 3.5 | 0.005 | 0.57 | 0.0 | 0.04 | 13.81 | 0.00 | 2.313 | 3.18 | 0.00 | 3.0 | 97.0 | 0.0 | -0.63 | 0.70 | 0.86 | 3.23 | 3.5 | 0.003 | 0.52 | 0.0 | 0.04 | 15.19 | 0.00 | 2.309 | 4.41 | 0.09 | 2.4 | 97.6 | 0.0 | 0.30 | 0.23 | 0.72 | 0.87 | 2.61 | 20538 | 2598 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6SD4 | 10148 | 2023-08-25 | 2019-07-26 | 2.8 | 3.00 | 2.71 | 2.9 | 0.010 | 0.78 | 0.0 | 0.04 | 12.27 | 0.00 | 2.235 | 7.10 | 0.75 | 9.7 | 89.7 | 0.7 | -4.67 | 0.78 | 0.85 | 5.63 | 2.9 | 0.004 | 0.65 | 0.0 | 0.04 | 17.17 | 0.00 | 2.013 | 7.15 | 1.62 | 1.1 | 98.9 | 0.0 | 1.08 | 0.98 | 0.74 | 0.86 | 4.72 | 40562 | 5134 | 34 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CX4 | 30491 | 2023-08-10 | 2020-09-01 | 2.9 | 3.15 | — | 3.1 | 0.004 | 0.64 | 0.0 | 0.05 | 12.81 | 0.00 | 2.032 | 8.05 | 0.00 | 3.5 | 96.5 | 0.0 | -1.78 | 0.66 | 0.80 | 3.58 | 3.1 | 0.002 | 0.56 | 0.0 | 0.04 | 16.05 | 0.00 | 2.158 | 6.90 | 1.91 | 3.1 | 96.9 | 0.0 | 0.48 | 0.50 | 0.65 | 0.81 | 2.63 | 7926 | 1020 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 6P9X | 20277 | 2023-08-10 | 2019-06-10 | 2.91 | 3.05 | 2.91 | 3.1 | 0.004 | 0.57 | 0.0 | 0.04 | 12.46 | 0.00 | 2.211 | 5.46 | 0.23 | 2.1 | 97.9 | 0.0 | -3.97 | 0.64 | 0.82 | 4.18 | 3.1 | 0.002 | 0.56 | 0.0 | 0.04 | 15.58 | 0.00 | 2.201 | 7.13 | 2.16 | 2.2 | 97.8 | 0.0 | 0.79 | 0.49 | 0.66 | 0.84 | 3.26 | 8177 | 1015 | 9 | 0 | 0 | 17 | 0 | logfile |
✔ | 8DVU | 27745 | 2023-08-09 | 2022-07-29 | 2.9 | 3.07 | 2.86 | 3.0 | 0.002 | 0.51 | 0.0 | 0.04 | 13.39 | 0.00 | 2.164 | 6.25 | 1.01 | 6.2 | 93.8 | 0.0 | -2.23 | 0.73 | 0.84 | 3.49 | 3.0 | 0.004 | 0.57 | 0.0 | 0.04 | 15.42 | 0.00 | 2.030 | 6.08 | 2.01 | 7.8 | 92.2 | 0.0 | 0.24 | 0.42 | 0.70 | 0.84 | 3.74 | 6170 | 669 | 3 | 36 | 3 | 0 | 0 | logfile |