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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7LCJ | 23275 | 2022-05-12 | 2021-01-11 | 2.82 | 3.02 | 2.78 | 3.1 | 0.011 | 1.19 | 3.0 | 0.08 | 13.36 | 0.01 | 2.216 | 8.73 | 1.16 | 3.9 | 96.1 | 0.0 | 0.54 | 0.46 | 0.80 | 2.75 | 3.1 | 0.002 | 0.48 | 0.0 | 0.03 | 15.51 | 0.00 | 2.257 | 4.36 | 0.58 | 1.8 | 98.2 | 0.0 | 1.56 | 1.69 | 0.49 | 0.82 | 2.84 | 3264 | 390 | 1 | 0 | 1 | 17 | 0 | logfile |
✔ | 7oo0 | 13003 | 2022-05-14 | 2021-05-26 | 3.1 | 3.05 | 2.96 | 3.1 | 0.012 | 1.13 | 0.0 | 0.07 | 12.80 | 0.00 | 2.131 | 7.27 | 0.00 | 3.1 | 96.9 | 0.0 | -1.80 | 0.61 | 0.78 | 2.85 | 3.1 | 0.003 | 0.48 | 0.0 | 0.04 | 13.87 | 0.00 | 2.313 | 6.05 | 0.00 | 1.5 | 98.5 | 0.0 | 1.59 | 1.54 | 0.63 | 0.80 | 2.28 | 16016 | 1834 | 14 | 0 | 56 | 0 | 0 | logfile |
✔ | 7D4P | 30575 | 2022-05-15 | 2020-09-24 | 2.7 | 3.03 | 2.86 | 3.0 | 0.007 | 0.80 | 0.0 | 0.04 | 13.57 | 0.00 | 2.269 | 4.70 | 0.67 | 1.2 | 98.8 | 0.0 | 2.42 | 0.58 | 0.76 | 3.11 | 3.0 | 0.002 | 0.48 | 0.0 | 0.03 | 15.83 | 0.00 | 2.208 | 4.35 | 1.01 | 0.9 | 99.1 | 0.0 | 2.71 | 0.61 | 0.59 | 0.78 | 2.69 | 22472 | 2676 | 8 | 0 | 28 | 0 | 0 | logfile |
✔ | 7oZU | 13135 | 2022-05-12 | 2021-06-28 | 3.3 | 3.27 | 3.22 | 3.4 | 0.007 | 0.52 | 0.0 | 0.04 | 12.44 | 0.00 | 2.218 | 6.28 | 0.00 | 3.1 | 96.9 | 0.0 | 0.39 | 0.62 | 0.79 | 3.13 | 3.4 | 0.003 | 0.48 | 0.0 | 0.04 | 14.81 | 0.00 | 2.049 | 7.74 | 0.23 | 2.8 | 97.2 | 0.0 | 0.45 | 1.89 | 0.75 | 0.86 | 3.16 | 8408 | 991 | 6 | 22 | 2 | 0 | 0 | logfile |
✔ | 7JMC | 22391 | 2022-05-17 | 2020-07-31 | 2.5 | 2.76 | 2.68 | 2.7 | 0.010 | 1.29 | 0.0 | 0.06 | 13.90 | 0.01 | 2.249 | 2.77 | 0.57 | 1.6 | 98.4 | 0.0 | 3.40 | 0.62 | 0.82 | 4.76 | 2.7 | 0.003 | 0.48 | 0.0 | 0.04 | 13.42 | 0.00 | 2.126 | 5.15 | 1.71 | 1.1 | 98.9 | 0.0 | 3.44 | 0.68 | 0.65 | 0.86 | 4.05 | 39828 | 2304 | 36 | 0 | 144 | 168 | 18576 | logfile |
✔ | 7MQB | 23941 | 2022-05-15 | 2021-05-05 | 3.25 | 3.29 | 3.22 | 3.3 | 0.007 | 0.72 | 0.0 | 0.05 | 13.00 | 0.00 | 2.302 | 3.12 | 0.66 | 0.5 | 99.5 | 0.0 | 1.28 | 0.81 | 0.86 | 4.28 | 3.3 | 0.003 | 0.48 | 0.0 | 0.04 | 14.47 | 0.00 | 2.141 | 4.03 | 0.82 | 2.5 | 97.5 | 0.0 | 1.13 | 0.37 | 0.82 | 0.89 | 4.88 | 12760 | 1640 | 16 | 16 | 0 | 0 | 0 | logfile |
✔ | 7D4Q | 30576 | 2022-05-15 | 2020-09-24 | 2.74 | 2.99 | 2.80 | 3.0 | 0.009 | 0.78 | 0.0 | 0.04 | 12.13 | 0.00 | 2.254 | 6.42 | 0.67 | 1.4 | 98.6 | 0.0 | 2.70 | 0.47 | 0.71 | 3.84 | 3.0 | 0.003 | 0.48 | 0.0 | 0.03 | 15.53 | 0.00 | 2.196 | 6.27 | 1.13 | 1.4 | 98.6 | 0.0 | 2.53 | 0.44 | 0.69 | 0.87 | 3.86 | 22388 | 2672 | 8 | 0 | 24 | 0 | 0 | logfile |
✔ | 6VRS | 21371 | 2022-05-13 | 2020-02-09 | 2.7 | 3.22 | — | 2.9 | 0.008 | 1.49 | 5.0 | 0.11 | 14.48 | 0.01 | 2.012 | 2.56 | 1.82 | 3.1 | 96.6 | 0.3 | -0.31 | 0.95 | 0.92 | 6.32 | 2.9 | 0.003 | 0.48 | 0.0 | 0.04 | 15.01 | 0.00 | 2.074 | 6.04 | 0.17 | 2.3 | 97.7 | 0.0 | 2.16 | 1.00 | 0.94 | 0.90 | 4.35 | 12208 | 1548 | 12 | 0 | 8 | 16 | 0 | logfile |
✔ | 7JGF | 22325 | 2022-05-12 | 2020-07-19 | 4.69 | 4.81 | — | 4.8 | 0.002 | 0.62 | 0.0 | 0.04 | 13.16 | 0.01 | 2.109 | 26.85 | 0.41 | 4.6 | 95.4 | 0.0 | -0.87 | 0.39 | 0.43 | — | 4.8 | 0.002 | 0.48 | 0.0 | 0.04 | 13.28 | 0.00 | 2.151 | 52.69 | 0.41 | 5.2 | 94.8 | 0.0 | 1.10 | 0.63 | 0.41 | 0.45 | — | 4477 | 532 | 1 | 0 | 0 | 0 | 30 | logfile |
✔ | 7oZV | 13138 | 2022-05-12 | 2021-06-28 | 3.2 | 3.08 | 3.16 | 3.3 | 0.007 | 0.58 | 0.0 | 0.04 | 13.29 | 0.01 | 2.202 | 8.59 | 0.00 | 2.6 | 97.4 | 0.0 | -0.22 | 0.64 | 0.79 | 3.09 | 3.3 | 0.003 | 0.48 | 0.0 | 0.04 | 15.36 | 0.00 | 2.139 | 8.29 | 0.00 | 2.3 | 97.7 | 0.0 | -0.10 | 1.89 | 0.73 | 0.83 | 2.74 | 8409 | 991 | 6 | 22 | 2 | 0 | 0 | logfile |
✔ | 7PXH | 13703 | 2022-05-16 | 2021-10-08 | 2.59 | 3.11 | 2.60 | 3.0 | 0.006 | 0.81 | 0.0 | 0.04 | 13.72 | 0.00 | 2.079 | 4.27 | 0.45 | 1.8 | 98.2 | 0.0 | 0.70 | 0.77 | 0.87 | 3.60 | 3.0 | 0.002 | 0.48 | 0.0 | 0.04 | 15.27 | 0.00 | 2.211 | 5.76 | 1.36 | 2.0 | 98.0 | 0.0 | 1.21 | 0.42 | 0.76 | 0.89 | 3.59 | 28922 | 3540 | 8 | 0 | 39 | 0 | 0 | logfile |
✔ | 7SMM | 25202 | 2022-05-14 | 2021-10-26 | 2.5 | 2.86 | — | 2.7 | 0.005 | 0.72 | 0.0 | 0.04 | 14.54 | 0.00 | 2.099 | 3.62 | 0.00 | 4.1 | 95.9 | 0.0 | 1.36 | 0.80 | 0.86 | 4.48 | 2.7 | 0.002 | 0.48 | 0.0 | 0.04 | 14.92 | 0.00 | 2.266 | 5.13 | 1.07 | 3.2 | 96.8 | 0.0 | 1.88 | 0.31 | 0.81 | 0.88 | 4.00 | 17256 | 2030 | 20 | 0 | 39 | 63 | 0 | logfile |
✔ | 7V21 | 31633 | 2022-05-13 | 2021-08-07 | 3.08 | 3.18 | — | 3.1 | 0.004 | 0.73 | 0.0 | 0.05 | 13.48 | 0.00 | 2.266 | 4.96 | 0.31 | 2.6 | 97.3 | 0.1 | 0.95 | 0.72 | 0.87 | 3.52 | 3.1 | 0.002 | 0.49 | 0.0 | 0.04 | 14.88 | 0.00 | 2.158 | 5.72 | 0.08 | 2.4 | 97.6 | 0.0 | 1.49 | 0.44 | 0.73 | 0.88 | 3.00 | 11903 | 1505 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VFD | 31949 | 2022-05-13 | 2021-09-13 | 2.25 | 2.33 | 2.21 | 2.3 | 0.004 | 0.53 | 0.0 | 0.05 | 12.47 | 0.00 | 2.204 | 3.85 | 0.60 | 3.7 | 96.3 | 0.0 | -0.65 | 0.81 | 0.88 | 6.01 | 2.3 | 0.002 | 0.49 | 0.0 | 0.05 | 15.37 | 0.00 | 2.246 | 3.23 | 0.47 | 2.1 | 97.9 | 0.0 | 0.43 | 1.13 | 0.80 | 0.88 | 5.42 | 13262 | 1623 | 6 | 0 | 0 | 350 | 0 | logfile |
✔ | 7WHN | 32505 | 2022-05-13 | 2021-12-31 | 3.3 | 2.99 | — | 3.2 | 0.009 | 0.80 | 0.0 | 0.05 | 13.81 | 0.01 | 2.147 | 7.75 | 0.10 | 4.5 | 95.5 | 0.0 | -1.29 | 0.41 | 0.83 | 2.92 | 3.2 | 0.002 | 0.49 | 0.0 | 0.04 | 15.01 | 0.00 | 2.268 | 5.58 | 0.19 | 2.4 | 97.6 | 0.0 | 1.01 | 0.40 | 0.37 | 0.80 | 2.24 | 9284 | 1170 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7P0M | 13148 | 2022-05-15 | 2021-06-30 | 2.75 | 3.51 | 2.75 | 2.7 | 0.002 | 0.44 | 0.0 | 0.04 | 16.31 | 0.00 | 1.800 | 7.70 | 1.88 | 1.7 | 98.3 | 0.0 | 1.65 | 0.95 | 0.88 | 2.52 | 2.8 | 0.002 | 0.49 | 0.0 | 0.04 | 16.49 | 0.00 | 2.005 | 9.02 | 2.07 | 1.7 | 98.3 | 0.0 | 1.67 | 0.24 | 0.96 | 0.89 | 2.22 | 25185 | 3185 | 19 | 0 | 45 | 0 | 0 | logfile |
✔ | 7MSX | 23971 | 2022-05-12 | 2021-05-12 | 3.15 | 3.24 | 3.04 | 3.2 | 0.008 | 0.62 | 0.0 | 0.05 | 10.30 | 0.00 | 2.385 | 0.95 | 0.00 | 1.9 | 98.1 | 0.0 | 0.06 | 0.77 | 0.85 | 3.76 | 3.2 | 0.003 | 0.49 | 0.0 | 0.04 | 15.13 | 0.00 | 2.210 | 5.43 | 0.49 | 2.1 | 97.9 | 0.0 | 1.21 | 1.12 | 0.79 | 0.87 | 3.16 | 3706 | 473 | 1 | 0 | 3 | 0 | 0 | logfile |
✔ | 7LFT | 23306 | 2022-05-14 | 2021-01-18 | 2.6 | 2.42 | — | 2.6 | 0.009 | 1.10 | 0.0 | 0.06 | 14.80 | 0.00 | 1.832 | 8.91 | 0.25 | 2.5 | 97.5 | 0.0 | -0.82 | 0.69 | 0.87 | 4.43 | 2.5 | 0.003 | 0.49 | 0.0 | 0.04 | 16.13 | 0.00 | 2.239 | 8.97 | 1.79 | 2.0 | 98.0 | 0.0 | 1.63 | 0.55 | 0.72 | 0.88 | 4.28 | 15479 | 1800 | 12 | 0 | 35 | 4 | 0 | logfile |
✔ | 7KoD | 22972 | 2022-05-14 | 2020-11-08 | 1.655 | 2.30 | — | 1.9 | 0.001 | 0.33 | 0.0 | 0.03 | 8.49 | 0.00 | 2.288 | 0.80 | 0.00 | 1.1 | 98.9 | 0.0 | 6.14 | 0.91 | 0.91 | 8.16 | 2.0 | 0.005 | 0.49 | 0.0 | 0.04 | 13.81 | 0.00 | 1.858 | 2.53 | 0.27 | 0.6 | 99.4 | 0.0 | 5.26 | 0.58 | 0.88 | 0.94 | 8.02 | 68186 | 4128 | 48 | 0 | 0 | 1727 | 32643 | logfile |
✔ | 7K0L | 22601 | 2022-05-12 | 2020-09-04 | 3.4 | 3.83 | — | 3.7 | 0.004 | 0.60 | 0.0 | 0.04 | 12.59 | 0.00 | 2.141 | 4.54 | 0.00 | 1.9 | 98.1 | 0.0 | 1.09 | 0.74 | 0.87 | 3.05 | 3.7 | 0.003 | 0.49 | 0.0 | 0.04 | 13.88 | 0.00 | 2.204 | 5.39 | 0.25 | 2.1 | 97.9 | 0.0 | 0.97 | 1.04 | 0.74 | 0.88 | 2.79 | 7619 | 964 | 4 | 0 | 2 | 0 | 0 | logfile |