The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7oRK | 13040 | 2022-12-14 | 2021-06-06 | 3.1 | 3.05 | — | 3.1 | 0.007 | 0.71 | 2.0 | 0.05 | 13.57 | 0.00 | 1.996 | 5.50 | 1.04 | 3.2 | 96.8 | 0.0 | 0.32 | 0.83 | 0.89 | 4.27 | 3.1 | 0.003 | 0.47 | 0.0 | 0.04 | 14.67 | 0.00 | 1.984 | 6.01 | 0.15 | 2.8 | 97.2 | 0.0 | 0.97 | 0.32 | 0.84 | 0.91 | 4.13 | 18699 | 2182 | 7 | 36 | 5 | 48 | 0 | logfile |
✔ | 7E4T | 30987 | 2022-12-14 | 2021-02-15 | 3.0 | 3.26 | 3.08 | 3.3 | 0.007 | 0.79 | 0.0 | 0.04 | 13.89 | 0.00 | 2.278 | 6.59 | 1.01 | 1.1 | 98.9 | 0.0 | 0.77 | 0.50 | 0.68 | 3.26 | 3.3 | 0.002 | 0.47 | 0.0 | 0.03 | 16.68 | 0.00 | 2.181 | 5.83 | 3.34 | 1.2 | 98.8 | 0.0 | 2.36 | 1.24 | 0.70 | 0.85 | 3.19 | 22276 | 2656 | 8 | 0 | 24 | 0 | 0 | logfile |
✔ | 6UCB | 20727 | 2022-12-18 | 2019-09-15 | 3.28 | 3.46 | — | 3.5 | 0.009 | 0.76 | 0.0 | 0.05 | 13.85 | 0.01 | 2.152 | 5.80 | 0.00 | 5.1 | 94.9 | 0.0 | -3.14 | 0.64 | 0.76 | 2.69 | 3.4 | 0.002 | 0.47 | 0.0 | 0.04 | 14.66 | 0.00 | 2.121 | 9.27 | 0.06 | 3.7 | 96.3 | 0.0 | 0.65 | 0.93 | 0.66 | 0.80 | 2.70 | 32324 | 2044 | 16 | 0 | 30 | 0 | 15694 | logfile |
✔ | 7YVQ | 34136 | 2022-12-16 | 2022-08-19 | 3.18 | 3.50 | 3.32 | 3.3 | 0.004 | 0.58 | 0.0 | 0.04 | 14.17 | 0.00 | 2.131 | 6.44 | 0.75 | 6.2 | 93.8 | 0.0 | -0.26 | 0.79 | 0.87 | 3.43 | 3.3 | 0.002 | 0.47 | 0.0 | 0.04 | 15.00 | 0.00 | 2.200 | 6.91 | 0.49 | 5.0 | 95.0 | 0.0 | 0.04 | 1.28 | 0.79 | 0.89 | 3.03 | 30742 | 3874 | 15 | 0 | 21 | 0 | 0 | logfile |
✔ | 7YHP | 33835 | 2022-12-11 | 2022-07-14 | 3.1 | 3.03 | 3.01 | 3.1 | 0.007 | 0.55 | 0.0 | 0.04 | 18.78 | 0.00 | 2.216 | 8.38 | 1.81 | 4.1 | 95.9 | 0.0 | 0.44 | 0.68 | 0.76 | 3.14 | 3.1 | 0.002 | 0.47 | 0.0 | 0.03 | 20.86 | 0.00 | 2.126 | 10.86 | 0.00 | 3.6 | 96.4 | 0.0 | 0.63 | 0.72 | 0.68 | 0.78 | 2.89 | 3815 | 374 | 4 | 38 | 1 | 0 | 0 | logfile |
✔ | 6C9i | 7436 | 2022-12-15 | 2018-01-26 | 3.09 | 3.21 | — | 3.2 | 0.029 | 1.48 | 0.0 | 0.12 | 9.22 | 0.01 | 2.417 | 1.04 | 0.00 | 0.3 | 99.6 | 0.1 | 2.36 | 0.79 | 0.85 | 4.97 | 3.2 | 0.004 | 0.47 | 0.0 | 0.04 | 15.04 | 0.00 | 2.229 | 5.61 | 0.12 | 0.0 | 100.0 | 0.0 | 3.66 | 2.42 | 0.72 | 0.90 | 3.62 | 23700 | 3087 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RUG | 24705 | 2022-12-11 | 2021-08-17 | 4.7 | 5.03 | 4.07 | 4.8 | 0.003 | 0.50 | 0.0 | 0.04 | 12.58 | 0.00 | 1.920 | 12.90 | 0.00 | 1.6 | 98.4 | 0.0 | 3.26 | 0.59 | 0.66 | — | 4.8 | 0.002 | 0.47 | 0.0 | 0.03 | 13.18 | 0.00 | 1.968 | 13.09 | 0.00 | 1.6 | 98.4 | 0.0 | 3.44 | 1.24 | 0.60 | 0.66 | — | 5429 | 331 | 2 | 0 | 0 | 0 | 2728 | logfile |
✔ | 7Z0Z | 14435 | 2022-12-12 | 2022-02-24 | 2.68 | 2.92 | 2.79 | 2.8 | 0.006 | 0.72 | 6.0 | 0.05 | 14.67 | 0.00 | 2.092 | 7.47 | 0.54 | 1.9 | 98.0 | 0.2 | 0.45 | 0.74 | 0.86 | 4.83 | 2.8 | 0.003 | 0.47 | 0.0 | 0.04 | 16.45 | 0.00 | 2.181 | 5.41 | 0.97 | 2.0 | 97.8 | 0.2 | 1.39 | 0.45 | 0.78 | 0.90 | 4.28 | 29466 | 3510 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SFJ | 25079 | 2022-12-11 | 2021-10-04 | 2.74 | 3.33 | — | 3.4 | 0.007 | 0.94 | 0.0 | 0.04 | 18.41 | 0.01 | 2.308 | 4.07 | 1.28 | 2.5 | 97.5 | 0.0 | 2.20 | 0.62 | 0.78 | 3.51 | 3.4 | 0.002 | 0.47 | 0.0 | 0.04 | 17.60 | 0.00 | 2.280 | 5.02 | 1.28 | 3.1 | 96.9 | 0.0 | 2.40 | 0.47 | 0.57 | 0.77 | 3.08 | 7377 | 852 | 9 | 0 | 24 | 3 | 0 | logfile |
✔ | 7S6D | 24875 | 2022-12-12 | 2021-09-13 | 3.1 | 3.82 | — | 3.4 | 0.005 | 0.71 | 0.0 | 0.04 | 13.49 | 0.00 | 2.083 | 3.46 | 0.00 | 3.4 | 96.6 | 0.0 | -0.10 | 0.86 | 0.81 | 3.05 | 3.4 | 0.003 | 0.47 | 0.0 | 0.04 | 14.14 | 0.00 | 2.025 | 5.78 | 0.00 | 3.8 | 96.2 | 0.0 | 0.32 | 1.12 | 0.86 | 0.83 | 3.01 | 46193 | 3112 | 8 | 0 | 1 | 0 | 22846 | logfile |
✔ | 7o6Q | 12740 | 2022-12-11 | 2021-04-12 | 1.88 | 2.21 | — | 1.9 | 0.010 | 0.71 | 0.0 | 0.05 | 12.80 | 0.01 | 2.115 | 4.83 | 1.25 | 3.2 | 96.8 | 0.0 | -1.61 | 0.88 | 0.85 | 7.59 | 1.9 | 0.002 | 0.47 | 0.0 | 0.04 | 14.46 | 0.00 | 2.188 | 5.37 | 1.63 | 0.8 | 99.2 | 0.0 | 3.35 | 0.36 | 0.90 | 0.90 | 6.06 | 7999 | 997 | 8 | 0 | 0 | 399 | 0 | logfile |
✔ | 8AG4 | 15415 | 2022-12-12 | 2022-07-19 | 2.46 | 2.04 | 2.48 | 1.7 | 0.003 | 0.49 | 0.0 | 0.04 | 13.59 | 0.00 | 2.170 | 5.34 | 0.00 | 3.9 | 96.1 | 0.0 | 0.77 | 0.82 | 0.83 | 4.04 | 1.7 | 0.002 | 0.47 | 0.0 | 0.04 | 15.71 | 0.00 | 2.188 | 6.06 | 1.03 | 3.2 | 96.8 | 0.0 | 0.97 | 0.89 | 0.81 | 0.83 | 3.75 | 11155 | 1384 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SiP | 25147 | 2022-12-11 | 2021-10-14 | 3.0 | 3.27 | — | 3.3 | 0.011 | 1.17 | 0.0 | 0.04 | 16.74 | 0.01 | 2.313 | 3.17 | 0.00 | 0.9 | 99.1 | 0.0 | 0.93 | 0.63 | 0.81 | 2.85 | 3.3 | 0.003 | 0.48 | 0.0 | 0.04 | 15.60 | 0.00 | 2.203 | 3.43 | 1.74 | 0.7 | 99.3 | 0.0 | 1.27 | 0.99 | 0.59 | 0.83 | 2.64 | 7560 | 892 | 12 | 0 | 36 | 20 | 0 | logfile |
✔ | 7SMS | 25207 | 2022-12-13 | 2021-10-26 | 3.18 | 3.33 | — | 3.3 | 0.006 | 0.73 | 0.0 | 0.05 | 15.02 | 0.00 | 2.187 | 5.29 | 0.00 | 2.8 | 97.2 | 0.0 | 1.21 | 0.78 | 0.85 | 3.74 | 3.3 | 0.002 | 0.48 | 0.0 | 0.04 | 15.07 | 0.00 | 2.207 | 6.87 | 0.11 | 1.9 | 98.1 | 0.0 | 1.85 | 1.14 | 0.78 | 0.86 | 3.35 | 17051 | 2015 | 15 | 0 | 32 | 0 | 0 | logfile |
✔ | 7MQF | 23945 | 2022-12-15 | 2021-05-05 | 2.88 | 2.74 | 2.86 | 2.8 | 0.006 | 0.72 | 0.0 | 0.06 | 11.73 | 0.00 | 2.175 | 1.47 | 0.00 | 0.5 | 99.5 | 0.0 | 1.24 | 0.72 | 0.87 | 6.16 | 2.7 | 0.003 | 0.48 | 0.0 | 0.04 | 13.44 | 0.00 | 2.256 | 3.06 | 0.00 | 1.0 | 99.0 | 0.0 | 1.02 | 0.44 | 0.78 | 0.91 | 5.71 | 12288 | 1608 | 16 | 16 | 0 | 0 | 0 | logfile |
✔ | 7oZV | 13138 | 2022-12-12 | 2021-06-28 | 3.2 | 3.08 | 3.16 | 3.3 | 0.007 | 0.58 | 0.0 | 0.04 | 13.29 | 0.01 | 2.202 | 8.59 | 0.00 | 2.6 | 97.4 | 0.0 | -0.22 | 0.64 | 0.79 | 3.09 | 3.3 | 0.003 | 0.48 | 0.0 | 0.04 | 15.36 | 0.00 | 2.139 | 8.29 | 0.00 | 2.3 | 97.7 | 0.0 | -0.10 | 1.89 | 0.72 | 0.83 | 2.74 | 8409 | 991 | 6 | 22 | 2 | 0 | 0 | logfile |
✔ | 7NKQ | 12446 | 2022-12-12 | 2021-02-18 | 2.98 | 3.25 | — | 3.1 | 0.004 | 0.49 | 0.0 | 0.04 | 13.52 | 0.00 | 2.018 | 7.16 | 0.00 | 2.7 | 97.3 | 0.0 | 1.39 | 0.81 | 0.81 | 2.98 | 3.1 | 0.003 | 0.48 | 0.0 | 0.04 | 15.76 | 0.00 | 2.010 | 7.06 | 0.87 | 2.3 | 97.7 | 0.0 | 2.24 | 0.31 | 0.82 | 0.84 | 2.58 | 10621 | 714 | 8 | 0 | 0 | 0 | 5312 | logfile |
✔ | 7RHL | 24465 | 2022-12-13 | 2021-07-17 | 3.03 | 2.43 | — | 2.7 | 0.003 | 0.56 | 0.0 | 0.04 | 13.97 | 0.00 | 2.217 | 5.53 | 0.00 | 1.5 | 98.5 | 0.0 | 1.66 | 0.63 | 0.84 | 3.54 | 2.7 | 0.003 | 0.48 | 0.0 | 0.04 | 15.00 | 0.00 | 2.177 | 8.90 | 0.19 | 1.3 | 98.7 | 0.0 | 2.85 | 0.34 | 0.63 | 0.86 | 3.51 | 15371 | 1932 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7K5C | 22680 | 2022-12-21 | 2020-09-16 | 2.7 | 2.91 | — | 2.9 | 0.004 | 0.53 | 0.0 | 0.04 | 14.17 | 0.00 | 2.201 | 4.90 | 0.00 | 3.2 | 96.8 | 0.0 | 1.14 | 0.71 | 0.85 | 3.23 | 2.9 | 0.002 | 0.48 | 0.0 | 0.04 | 17.30 | 0.00 | 2.131 | 5.04 | 0.96 | 2.8 | 97.2 | 0.0 | 2.52 | 0.44 | 0.66 | 0.83 | 2.61 | 41547 | 5268 | 24 | 0 | 0 | 219 | 0 | logfile |
✔ | 7WHM | 32504 | 2022-12-12 | 2021-12-31 | 2.7 | 2.86 | — | 2.8 | 0.006 | 0.64 | 0.0 | 0.05 | 13.85 | 0.00 | 2.155 | 6.35 | 0.00 | 3.1 | 96.9 | 0.0 | 0.15 | 0.43 | 0.87 | 4.68 | 2.9 | 0.002 | 0.48 | 0.0 | 0.04 | 15.99 | 0.00 | 2.270 | 5.83 | 0.65 | 2.5 | 97.5 | 0.0 | 1.56 | 1.12 | 0.41 | 0.85 | 3.68 | 9650 | 1214 | 1 | 0 | 0 | 0 | 0 | logfile |