The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6X0U | 21984 | 2023-08-09 | 2020-05-17 | 3.6 | 3.62 | — | 3.6 | 0.004 | 0.62 | 0.0 | 0.04 | 14.50 | 0.00 | 2.277 | 5.74 | 0.00 | 3.7 | 96.1 | 0.3 | -5.79 | 0.26 | 0.78 | 1.89 | 3.6 | 0.002 | 0.69 | 0.0 | 0.04 | 17.79 | 0.00 | 2.197 | 7.98 | 0.29 | 3.2 | 96.8 | 0.0 | 1.27 | 0.82 | 0.27 | 0.79 | 2.52 | 3091 | 398 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V3V | 31685 | 2023-08-16 | 2021-08-11 | 2.9 | 2.82 | — | 2.8 | 0.004 | 0.82 | 2.0 | 0.05 | 13.24 | 0.01 | 2.042 | 6.26 | 0.07 | 2.6 | 97.3 | 0.0 | -0.55 | 0.62 | 0.70 | 2.44 | 2.8 | 0.002 | 0.56 | 0.0 | 0.04 | 17.23 | 0.00 | 1.919 | 8.98 | 2.15 | 2.3 | 97.7 | 0.0 | 0.77 | 1.31 | 0.71 | 0.79 | 2.30 | 68356 | 8587 | 28 | 0 | 36 | 0 | 0 | logfile |
✔ | 7oCA | 12802 | 2023-08-20 | 2021-04-26 | 3.4 | 3.03 | — | 3.2 | 0.009 | 0.96 | 0.0 | 0.04 | 14.22 | 0.00 | 2.080 | 4.67 | 0.15 | 3.5 | 96.5 | 0.0 | 0.20 | 0.72 | 0.80 | 3.80 | 3.1 | 0.002 | 0.50 | 0.0 | 0.04 | 14.80 | 0.00 | 2.242 | 4.78 | 0.27 | 1.9 | 98.1 | 0.0 | 1.50 | 0.44 | 0.75 | 0.85 | 3.24 | 29294 | 3802 | 22 | 0 | 72 | 0 | 0 | logfile |
✔ | 8DVS | 27744 | 2023-08-09 | 2022-07-29 | 3.0 | 3.15 | 2.97 | 3.2 | 0.002 | 0.47 | 0.0 | 0.04 | 13.64 | 0.00 | 2.271 | 7.41 | 1.32 | 6.8 | 93.2 | 0.0 | -1.94 | 0.68 | 0.80 | 2.76 | 3.1 | 0.002 | 0.54 | 0.0 | 0.04 | 15.88 | 0.00 | 2.201 | 6.40 | 2.63 | 7.4 | 92.6 | 0.0 | 0.64 | 0.45 | 0.71 | 0.85 | 3.21 | 6058 | 682 | 3 | 26 | 3 | 0 | 0 | logfile |
✔ | 7CFM | 30344 | 2023-08-10 | 2020-06-27 | 3.0 | 3.21 | — | 3.2 | 0.006 | 0.99 | 0.0 | 0.06 | 11.26 | 0.01 | 1.988 | 8.31 | 0.24 | 3.0 | 97.0 | 0.0 | -2.23 | 0.61 | 0.78 | 3.69 | 3.2 | 0.002 | 0.59 | 0.0 | 0.04 | 15.49 | 0.00 | 2.185 | 6.82 | 1.79 | 2.1 | 97.9 | 0.0 | 1.25 | 0.56 | 0.61 | 0.79 | 2.60 | 8081 | 1027 | 5 | 0 | 4 | 1 | 0 | logfile |
✔ | 7KSM | 23020 | 2023-08-18 | 2020-11-23 | 3.2 | 2.90 | 3.21 | 3.1 | 0.007 | 0.79 | 0.0 | 0.05 | 14.48 | 0.01 | 1.934 | 7.88 | 0.08 | 4.4 | 95.6 | 0.0 | -2.42 | 0.76 | 0.86 | 3.00 | 3.1 | 0.002 | 0.55 | 0.0 | 0.04 | 16.01 | 0.00 | 2.005 | 7.70 | 0.30 | 3.7 | 96.3 | 0.0 | 0.21 | 1.22 | 0.77 | 0.87 | 2.33 | 24547 | 3137 | 13 | 0 | 22 | 0 | 0 | logfile |
✔ | 6VYL | 21463 | 2023-08-13 | 2020-02-27 | 3.4 | 3.43 | — | 3.4 | 0.008 | 0.85 | 0.0 | 0.05 | 14.42 | 0.01 | 2.293 | 4.68 | 0.48 | 5.1 | 94.9 | 0.0 | -4.60 | 0.72 | 0.84 | 2.99 | 3.4 | 0.002 | 0.52 | 0.0 | 0.04 | 15.80 | 0.00 | 2.156 | 8.64 | 0.21 | 3.4 | 96.6 | 0.0 | -0.15 | 0.53 | 0.67 | 0.83 | 2.63 | 13671 | 1792 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V2E | 31643 | 2023-08-15 | 2021-08-08 | 2.8 | 2.87 | — | 2.8 | 0.008 | 0.90 | 8.0 | 0.05 | 15.67 | 0.01 | 1.695 | 9.97 | 0.40 | 3.6 | 96.1 | 0.2 | 0.73 | 0.80 | 0.87 | 3.71 | 2.8 | 0.002 | 0.55 | 0.0 | 0.04 | 16.74 | 0.00 | 2.134 | 7.19 | 1.34 | 3.5 | 96.5 | 0.1 | 1.15 | 0.35 | 0.79 | 0.89 | 3.28 | 68244 | 8269 | 68 | 0 | 45 | 0 | 0 | logfile |
✔ | 8iWE | 35765 | 2023-08-09 | 2023-03-29 | 3.4 | 3.95 | 3.24 | 3.8 | 0.004 | 0.93 | 1.0 | 0.07 | 16.00 | 0.00 | 2.321 | 10.10 | 2.84 | 5.9 | 94.1 | 0.0 | -0.50 | 0.58 | 0.79 | 2.37 | 3.8 | 0.002 | 0.59 | 0.0 | 0.04 | 15.63 | 0.00 | 2.185 | 4.36 | 1.42 | 5.5 | 94.5 | 0.0 | 0.49 | 1.00 | 0.60 | 0.84 | 1.73 | 2236 | 296 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6QTZ | 4636 | 2023-08-18 | 2019-02-26 | 3.5 | 3.65 | — | 3.6 | 0.006 | 0.81 | 8.0 | 0.04 | 15.79 | 0.01 | 1.165 | 4.32 | 0.66 | 7.3 | 92.5 | 0.2 | -4.44 | 0.83 | 0.84 | 2.55 | 3.6 | 0.002 | 0.53 | 0.0 | 0.03 | 15.96 | 0.00 | 2.060 | 9.26 | 0.45 | 5.4 | 94.6 | 0.1 | -1.24 | 0.50 | 0.84 | 0.85 | 1.85 | 130259 | 7050 | 54 | 3423 | 217 | 0 | 0 | logfile |
✔ | 6oFJ | 20047 | 2023-08-11 | 2019-03-30 | 4.5 | 5.60 | 3.27 | 7.8 | 0.007 | 0.96 | 0.0 | 0.05 | 15.74 | 0.01 | 2.135 | 3.69 | 0.00 | 7.1 | 92.9 | 0.0 | -4.36 | 0.48 | 0.33 | — | 7.8 | 0.002 | 0.58 | 0.0 | 0.04 | 14.03 | 0.00 | 2.002 | 10.00 | 0.00 | 8.7 | 91.3 | 0.0 | -1.93 | 1.22 | 0.56 | 0.54 | — | 10310 | 650 | 2 | 0 | 0 | 0 | 5142 | logfile |
✔ | 7VoJ | 32050 | 2023-08-09 | 2021-10-14 | 3.0 | 3.21 | — | 3.3 | 0.008 | 1.01 | 0.0 | 0.06 | 13.59 | 0.01 | 2.061 | 7.62 | 1.73 | 3.3 | 96.5 | 0.3 | -2.46 | 0.65 | 0.83 | 2.35 | 3.3 | 0.002 | 0.56 | 0.0 | 0.03 | 16.62 | 0.00 | 1.924 | 4.63 | 2.02 | 2.9 | 97.1 | 0.0 | 3.11 | 2.16 | 0.60 | 0.82 | 1.75 | 6318 | 800 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 6ENF | 3898 | 2023-08-24 | 2017-10-04 | 3.2 | 3.22 | — | 3.2 | 0.003 | 0.75 | 1.0 | 0.04 | 13.88 | 0.01 | 1.244 | 4.82 | 0.53 | 8.0 | 91.7 | 0.3 | -4.83 | 0.75 | 0.78 | 2.02 | 3.2 | 0.002 | 0.59 | 0.0 | 0.03 | 15.29 | 0.00 | 2.074 | 10.66 | 0.51 | 7.7 | 92.2 | 0.2 | -1.82 | 1.26 | 0.80 | 0.84 | 1.84 | 140797 | 5531 | 53 | 4546 | 0 | 0 | 0 | logfile |
✔ | 8D67 | 27219 | 2023-08-12 | 2022-06-06 | 3.3 | 3.45 | 2.92 | 3.5 | 0.009 | 0.97 | 0.0 | 0.07 | 13.90 | 0.01 | 2.261 | 6.52 | 0.36 | 7.5 | 92.5 | 0.0 | -1.52 | 0.68 | 0.82 | 3.08 | 3.5 | 0.002 | 0.49 | 0.0 | 0.04 | 15.33 | 0.00 | 2.247 | 4.52 | 0.22 | 4.5 | 95.5 | 0.0 | -0.19 | 1.17 | 0.69 | 0.83 | 2.67 | 12570 | 1540 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7W4C | 32300 | 2023-08-15 | 2021-11-27 | 2.7 | 2.83 | — | 2.8 | 0.007 | 0.82 | 0.0 | 0.04 | 18.50 | 0.01 | 2.188 | 7.03 | 1.33 | 3.4 | 96.5 | 0.1 | 0.86 | 0.80 | 0.89 | 3.32 | 2.8 | 0.002 | 0.53 | 0.0 | 0.04 | 17.52 | 0.00 | 2.146 | 6.93 | 1.79 | 3.5 | 96.4 | 0.0 | 1.26 | 0.27 | 0.78 | 0.88 | 3.06 | 68216 | 8270 | 69 | 0 | 47 | 0 | 0 | logfile |
✔ | 7W0Y | 32249 | 2023-08-15 | 2021-11-18 | 3.4 | 3.42 | — | 3.4 | 0.008 | 0.81 | 0.0 | 0.04 | 17.98 | 0.01 | 2.148 | 11.79 | 0.22 | 3.4 | 96.5 | 0.1 | 1.17 | 0.78 | 0.85 | 2.73 | 3.4 | 0.002 | 0.54 | 0.0 | 0.04 | 17.04 | 0.00 | 2.142 | 8.54 | 0.24 | 3.3 | 96.6 | 0.0 | 1.18 | 0.35 | 0.78 | 0.86 | 2.57 | 68093 | 8269 | 68 | 0 | 44 | 0 | 0 | logfile |
✔ | 7X2D | 32965 | 2023-08-12 | 2022-02-25 | 3.3 | 3.43 | — | 3.5 | 0.005 | 0.84 | 1.0 | 0.05 | 14.43 | 0.01 | 1.860 | 12.03 | 0.57 | 3.0 | 97.0 | 0.0 | -0.46 | 0.64 | 0.79 | 2.37 | 3.5 | 0.002 | 0.57 | 0.0 | 0.04 | 16.00 | 0.00 | 2.106 | 9.39 | 0.45 | 2.0 | 98.0 | 0.0 | 1.17 | 1.18 | 0.63 | 0.82 | 2.16 | 8203 | 1032 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7XTQ | 33452 | 2023-08-10 | 2022-05-17 | 3.2 | 2.29 | 3.30 | 2.1 | 0.004 | 0.77 | 0.0 | 0.05 | 12.74 | 0.01 | 2.192 | 5.84 | 0.00 | 3.1 | 96.9 | 0.0 | -0.37 | 0.73 | 0.74 | 2.67 | 2.1 | 0.002 | 0.63 | 0.0 | 0.04 | 15.64 | 0.00 | 2.163 | 6.72 | 0.12 | 2.6 | 97.4 | 0.0 | 0.76 | 0.38 | 0.71 | 0.74 | 1.86 | 8010 | 1027 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 6oFF | 20044 | 2023-08-12 | 2019-03-29 | 3.2 | 3.32 | — | 3.3 | 0.009 | 0.83 | 0.0 | 0.04 | 10.88 | 0.01 | 2.147 | 4.73 | 0.00 | 3.9 | 96.1 | 0.0 | -5.21 | 0.59 | 0.85 | 4.52 | 3.3 | 0.002 | 0.53 | 0.0 | 0.03 | 15.58 | 0.00 | 2.230 | 6.89 | 0.25 | 3.8 | 96.2 | 0.0 | 4.04 | 1.22 | 0.62 | 0.88 | 3.84 | 11016 | 1404 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 6SMQ | 10245 | 2023-08-25 | 2019-08-22 | 3.3 | 3.30 | — | 3.3 | 0.011 | 1.04 | 0.0 | 0.06 | 14.96 | 0.01 | 2.261 | 3.35 | 0.43 | 7.4 | 92.4 | 0.2 | -3.34 | 0.78 | 0.88 | 4.04 | 3.3 | 0.002 | 0.55 | 0.0 | 0.04 | 15.68 | 0.00 | 2.204 | 4.86 | 0.04 | 4.9 | 95.1 | 0.0 | -0.67 | 0.42 | 0.77 | 0.88 | 3.23 | 22136 | 2791 | 9 | 0 | 9 | 0 | 0 | logfile |