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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5U9G | 8522 | 2024-03-01 | 2016-12-16 | 3.2 | 4.54 | — | 3.3 | 0.006 | 0.92 | 0.0 | 0.08 | 21.99 | 0.01 | 2.111 | 12.37 | 0.93 | 10.6 | 88.5 | 1.0 | -5.08 | 0.89 | 0.79 | 1.20 | 3.4 | 0.005 | 0.69 | 0.0 | 0.03 | 23.04 | 0.00 | 1.809 | 21.51 | 3.09 | 9.4 | 90.4 | 0.2 | -1.67 | 1.89 | 0.95 | 0.91 | 1.11 | 152649 | 6561 | 70 | 4729 | 349 | 0 | 0 | logfile |
✔ | 6ZBD | 11151 | 2024-03-18 | 2020-06-08 | 3.21 | 3.97 | 3.37 | 3.6 | 0.010 | 1.19 | 0.0 | 0.08 | 13.68 | 0.01 | 2.466 | 0.97 | 0.00 | 0.9 | 99.1 | 0.0 | 0.87 | 0.85 | 0.78 | 1.78 | 3.6 | 0.002 | 0.50 | 0.0 | 0.03 | 15.02 | 0.00 | 2.018 | 4.25 | 1.00 | 1.4 | 98.6 | 0.0 | 3.81 | 2.61 | 0.86 | 0.80 | 1.74 | 19519 | 1159 | 4 | 0 | 0 | 0 | 9896 | logfile |
✔ | 7XSN | 33428 | 2024-03-11 | 2022-05-14 | 3.01 | 4.02 | 3.04 | 3.2 | 0.013 | 1.06 | 0.0 | 0.05 | 25.09 | 0.01 | 2.252 | 5.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.91 | 0.84 | — | 3.2 | 0.006 | 0.63 | 0.0 | 0.03 | 24.73 | 0.00 | 2.107 | 21.06 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.26 | 0.92 | 0.88 | — | 8279 | 0 | 1 | 387 | 0 | 0 | 0 | logfile |
✔ | 7RU6 | 24698 | 2024-03-10 | 2021-08-16 | 4.4 | 4.33 | 3.79 | 4.2 | 0.003 | 0.59 | 0.0 | 0.04 | 15.25 | 0.00 | 2.027 | 10.32 | 0.00 | 0.3 | 99.7 | 0.0 | 3.15 | 0.71 | 0.67 | — | 4.2 | 0.003 | 0.52 | 0.0 | 0.03 | 12.86 | 0.00 | 2.107 | 6.63 | 0.00 | 1.6 | 98.4 | 0.0 | 3.90 | 0.73 | 0.74 | 0.70 | — | 5426 | 331 | 2 | 0 | 0 | 0 | 2725 | logfile |
✔ | 7PGP | 13391 | 2024-03-20 | 2021-08-15 | 3.1 | 3.32 | 3.11 | 3.2 | 0.005 | 0.48 | 0.0 | 0.04 | 11.53 | 0.00 | 1.908 | 4.63 | 0.81 | 1.8 | 98.2 | 0.0 | -1.55 | 0.71 | 0.80 | 2.56 | 3.2 | 0.003 | 0.53 | 0.0 | 0.03 | 14.18 | 0.00 | 1.839 | 4.35 | 1.69 | 3.5 | 96.4 | 0.1 | 1.35 | 1.63 | 0.76 | 0.85 | 1.86 | 28506 | 1788 | 2 | 0 | 0 | 0 | 14363 | logfile |
✔ | 8ET9 | 28589 | 2024-03-11 | 2022-10-16 | 3.61 | 3.97 | 3.84 | 3.9 | 0.005 | 0.61 | 0.0 | 0.04 | 10.84 | 0.01 | 2.058 | 8.46 | 0.52 | 1.8 | 98.2 | 0.0 | 1.38 | 0.46 | 0.67 | 2.05 | 4.0 | 0.003 | 0.55 | 0.0 | 0.03 | 14.58 | 0.00 | 1.929 | 9.24 | 2.62 | 3.3 | 96.7 | 0.0 | 0.98 | 4.54 | 0.47 | 0.69 | 2.05 | 7685 | 517 | 1 | 0 | 1 | 0 | 3796 | logfile |
✔ | 7N3o | 24142 | 2024-03-11 | 2021-06-01 | 3.8 | 4.01 | — | 3.9 | 0.003 | 0.59 | 0.0 | 0.04 | 23.64 | 0.00 | 2.285 | 8.30 | 1.35 | 3.6 | 96.4 | 0.0 | 1.09 | 0.71 | 0.66 | 1.57 | 3.9 | 0.003 | 0.66 | 0.0 | 0.03 | 23.96 | 0.00 | 2.162 | 17.01 | 2.70 | 3.6 | 96.4 | 0.0 | 0.96 | 0.84 | 0.75 | 0.74 | 1.92 | 8295 | 454 | 2 | 222 | 0 | 0 | 0 | logfile |
✔ | 7NG9 | 12310 | 2024-03-17 | 2021-02-08 | 3.3 | 3.48 | 3.33 | 3.5 | 0.007 | 0.48 | 0.0 | 0.04 | 14.72 | 0.00 | 2.250 | 4.23 | 0.85 | 3.6 | 96.4 | 0.0 | -0.87 | 0.62 | 0.80 | 4.09 | 3.5 | 0.002 | 0.46 | 0.0 | 0.03 | 16.08 | 0.00 | 2.128 | 6.82 | 1.22 | 2.2 | 97.8 | 0.0 | 2.42 | 2.58 | 0.68 | 0.85 | 3.37 | 19368 | 1263 | 3 | 0 | 0 | 0 | 9615 | logfile |
✔ | 7PGQ | 13392 | 2024-03-21 | 2021-08-15 | 3.5 | 3.89 | 3.50 | 3.6 | 0.003 | 0.45 | 0.0 | 0.03 | 10.68 | 0.00 | 1.905 | 3.80 | 0.91 | 1.2 | 98.8 | 0.0 | -0.24 | 0.81 | 0.79 | 1.38 | 3.6 | 0.003 | 0.52 | 0.0 | 0.03 | 12.89 | 0.00 | 2.006 | 5.48 | 1.42 | 3.6 | 96.3 | 0.1 | 1.09 | 0.71 | 0.81 | 0.79 | 1.34 | 31508 | 1970 | 3 | 0 | 2 | 0 | 15807 | logfile |
✔ | 7XQB | 33392 | 2024-03-25 | 2022-05-07 | 3.0 | 3.07 | 2.98 | 3.1 | 0.006 | 1.12 | 0.0 | 0.04 | 18.74 | 0.00 | 2.280 | 2.77 | 1.10 | 2.0 | 98.0 | 0.0 | 2.22 | 0.66 | 0.87 | 3.09 | 3.1 | 0.003 | 0.59 | 0.0 | 0.03 | 16.03 | 0.00 | 2.173 | 7.03 | 1.01 | 4.1 | 95.9 | 0.0 | 2.23 | 0.84 | 0.65 | 0.88 | 3.01 | 42852 | 2424 | 24 | 0 | 168 | 0 | 20040 | logfile |
✔ | 8E4M | 27892 | 2024-03-25 | 2022-08-18 | 3.44 | 3.74 | 3.39 | 3.6 | 0.003 | 0.45 | 0.0 | 0.03 | 10.73 | 0.00 | 2.248 | 6.37 | 0.00 | 1.9 | 98.1 | 0.0 | 3.12 | 0.66 | 0.74 | 1.61 | 3.6 | 0.003 | 0.50 | 0.0 | 0.03 | 13.77 | 0.00 | 2.093 | 8.56 | 2.35 | 3.1 | 96.9 | 0.0 | 2.44 | 0.85 | 0.67 | 0.76 | 1.96 | 49595 | 3524 | 8 | 0 | 12 | 0 | 23500 | logfile |
✔ | 7F92 | 31495 | 2024-03-18 | 2021-07-03 | 3.1 | 3.23 | 3.05 | 3.2 | 0.008 | 1.29 | 0.0 | 0.05 | 16.75 | 0.01 | 2.271 | 0.63 | 2.29 | 3.0 | 97.0 | 0.0 | -6.40 | 0.75 | 0.90 | 3.09 | 3.2 | 0.002 | 0.53 | 0.0 | 0.03 | 15.33 | 0.00 | 2.288 | 1.12 | 1.81 | 1.2 | 98.8 | 0.0 | 1.39 | 0.30 | 0.72 | 0.90 | 2.63 | 21240 | 2352 | 36 | 0 | 132 | 264 | 0 | logfile |
✔ | 7XEV | 33160 | 2024-03-24 | 2022-03-31 | 3.27 | 3.37 | 3.32 | 3.4 | 0.003 | 0.54 | 0.0 | 0.04 | 14.96 | 0.01 | 1.948 | 9.51 | 0.00 | 4.9 | 94.9 | 0.2 | 0.69 | 0.67 | 0.75 | 1.63 | 3.4 | 0.004 | 0.54 | 0.0 | 0.03 | 16.22 | 0.01 | 1.945 | 8.79 | 1.52 | 6.1 | 93.8 | 0.2 | 0.45 | 0.46 | 0.68 | 0.77 | 1.73 | 40332 | 2456 | 8 | 0 | 4 | 0 | 20284 | logfile |
✔ | 7CRo | 30453 | 2024-03-20 | 2020-08-14 | 3.75 | 3.86 | — | 3.8 | 0.006 | 0.74 | 1.0 | 0.04 | 27.72 | 0.00 | 1.421 | 10.71 | 1.45 | 8.7 | 91.3 | 0.0 | -5.38 | 0.78 | 0.83 | 2.26 | 3.8 | 0.003 | 0.56 | 0.0 | 0.03 | 27.65 | 0.00 | 2.233 | 6.85 | 0.48 | 4.8 | 95.2 | 0.0 | -1.88 | 0.52 | 0.79 | 0.83 | 1.22 | 14797 | 999 | 11 | 336 | 4 | 0 | 0 | logfile |
✔ | 8G8G | 29850 | 2024-03-16 | 2023-02-17 | 3.2 | 4.22 | 3.27 | 3.4 | 0.005 | 0.59 | 0.0 | 0.03 | 27.41 | 0.00 | 1.622 | 6.71 | 0.64 | 1.8 | 98.2 | 0.0 | -0.50 | 0.70 | 0.50 | 0.77 | 3.0 | 0.004 | 0.66 | 0.0 | 0.03 | 28.32 | 0.00 | 2.137 | 11.61 | 0.51 | 2.7 | 97.3 | 0.0 | 1.94 | 1.57 | 0.91 | 0.87 | 1.85 | 14558 | 931 | 11 | 348 | 0 | 0 | 0 | logfile |
✔ | 8E55 | 27903 | 2024-03-15 | 2022-08-19 | 3.85 | 4.07 | 3.34 | 4.0 | 0.007 | 0.67 | 0.0 | 0.03 | 12.36 | 0.00 | 2.252 | 3.39 | 0.50 | 2.5 | 97.5 | 0.0 | 1.17 | 0.66 | 0.60 | -0.11 | 4.0 | 0.003 | 0.57 | 0.0 | 0.03 | 16.27 | 0.00 | 2.251 | 11.21 | 1.85 | 1.6 | 98.4 | 0.0 | 4.07 | 1.44 | 0.69 | 0.71 | -0.11 | 12176 | 780 | 4 | 0 | 0 | 0 | 6104 | logfile |
✔ | 6DZi | 8932 | 2024-03-27 | 2018-07-05 | 3.46 | 3.52 | — | 3.5 | 0.011 | 1.05 | 21.0 | 0.07 | 23.51 | 0.01 | 1.028 | 7.00 | 0.62 | 9.8 | 89.5 | 0.8 | -4.46 | 0.78 | 0.79 | 2.41 | 3.5 | 0.003 | 0.62 | 0.0 | 0.03 | 23.45 | 0.00 | 2.010 | 10.85 | 3.27 | 6.7 | 93.3 | 0.0 | -1.34 | 1.22 | 0.82 | 0.84 | 1.68 | 150868 | 6283 | 56 | 4748 | 0 | 0 | 0 | logfile |
✔ | 8G8E | 29846 | 2024-03-10 | 2023-02-17 | 4.2 | 7.38 | 5.01 | 5.9 | 0.004 | 0.73 | 0.0 | 0.04 | 28.39 | 0.00 | 2.277 | 15.90 | 0.79 | 1.5 | 98.5 | 0.0 | 0.35 | 0.81 | 0.66 | — | 6.0 | 0.003 | 0.63 | 0.0 | 0.03 | 27.96 | 0.00 | 2.242 | 14.99 | 0.00 | 2.9 | 97.1 | 0.0 | 0.05 | 1.83 | 0.91 | 0.82 | — | 2464 | 140 | 3 | 64 | 0 | 0 | 0 | logfile |
✔ | 5iQR | 8107 | 2024-03-02 | 2016-03-11 | 3.0 | 3.10 | 3.03 | 3.1 | 0.008 | 1.25 | 41.0 | 0.10 | 24.24 | 0.02 | 0.899 | 7.48 | 6.07 | 7.5 | 91.0 | 1.5 | -2.52 | 0.76 | 0.81 | 1.93 | 3.0 | 0.003 | 0.68 | 0.0 | 0.03 | 23.77 | 0.01 | 1.070 | 14.69 | 4.52 | 5.3 | 94.4 | 0.2 | -0.61 | 2.06 | 0.81 | 0.86 | 1.86 | 154519 | 6570 | 74 | 4794 | 303 | 2 | 0 | logfile |
✔ | 8ET7 | 28587 | 2024-03-11 | 2022-10-16 | 3.77 | 4.05 | 3.85 | 4.0 | 0.003 | 0.49 | 0.0 | 0.03 | 11.06 | 0.00 | 2.342 | 3.90 | 0.24 | 3.2 | 96.8 | 0.0 | 1.90 | 0.49 | 0.70 | 1.68 | 4.0 | 0.003 | 0.55 | 0.0 | 0.03 | 15.34 | 0.00 | 1.918 | 7.31 | 3.54 | 5.8 | 94.2 | 0.0 | 1.58 | 1.49 | 0.50 | 0.72 | 1.42 | 8111 | 532 | 3 | 0 | 3 | 0 | 4007 | logfile |