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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8CXM | 27060 | 2023-04-20 | 2022-05-21 | 3.21 | 3.69 | 3.21 | 3.6 | 0.003 | 0.50 | 0.0 | 0.03 | 14.84 | 0.00 | 2.093 | 8.38 | 0.06 | 4.1 | 95.9 | 0.0 | 3.68 | 0.56 | 0.87 | 1.34 | 3.5 | 0.003 | 0.53 | 0.0 | 0.03 | 16.26 | 0.00 | 2.108 | 6.36 | 0.15 | 3.9 | 96.1 | 0.0 | 4.62 | 1.14 | 0.58 | 0.89 | 1.41 | 109560 | 14685 | 55 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R6K | 24280 | 2023-04-25 | 2021-06-22 | 3.17 | 3.23 | 3.15 | 3.2 | 0.003 | 0.52 | 0.0 | 0.04 | 14.70 | 0.00 | 2.200 | 8.68 | 0.00 | 4.3 | 95.7 | 0.0 | 0.58 | 0.73 | 0.79 | 2.37 | 3.2 | 0.002 | 0.50 | 0.0 | 0.03 | 15.88 | 0.00 | 2.182 | 7.38 | 0.16 | 4.5 | 95.5 | 0.0 | 1.36 | 0.41 | 0.73 | 0.81 | 2.16 | 20543 | 2153 | 16 | 152 | 0 | 0 | 0 | logfile |
✔ | 6WYV | 21969 | 2023-04-27 | 2020-05-13 | 2.75 | 3.18 | — | 3.0 | 0.006 | 0.51 | 1.0 | 0.02 | 13.15 | 0.03 | 1.925 | 3.89 | 1.57 | 7.1 | 92.8 | 0.1 | -4.66 | 0.70 | 0.84 | 3.35 | 3.0 | 0.004 | 0.69 | 1.0 | 0.03 | 15.47 | 0.01 | 2.001 | 11.08 | 4.98 | 7.6 | 92.3 | 0.1 | -1.76 | 1.51 | 0.71 | 0.88 | 3.05 | 72194 | 971 | 9 | 3015 | 1 | 0 | 0 | logfile |
✔ | 6PC6 | 20297 | 2023-04-27 | 2019-06-16 | 2.5 | 3.08 | — | 2.9 | 0.008 | 0.56 | 0.0 | 0.02 | 13.08 | 0.03 | 1.930 | 2.91 | 2.11 | 6.3 | 93.7 | 0.0 | -3.58 | 0.73 | 0.88 | 4.50 | 2.9 | 0.005 | 0.67 | 0.0 | 0.03 | 14.86 | 0.01 | 1.949 | 7.94 | 3.68 | 6.6 | 93.2 | 0.2 | -0.81 | 0.91 | 0.74 | 0.90 | 4.30 | 72127 | 963 | 8 | 3015 | 1 | 0 | 0 | logfile |
✔ | 7S38 | 24819 | 2023-04-23 | 2021-09-04 | 3.3 | 3.17 | 3.25 | 3.1 | 0.008 | 0.99 | 0.0 | 0.05 | 15.52 | 0.01 | 2.233 | 2.62 | 0.08 | 4.2 | 95.8 | 0.0 | -1.38 | 0.86 | 0.83 | 3.03 | 3.1 | 0.002 | 0.52 | 0.0 | 0.03 | 17.38 | 0.00 | 2.095 | 8.30 | 0.00 | 2.5 | 97.5 | 0.0 | 0.46 | 1.31 | 0.88 | 0.87 | 2.70 | 13987 | 1353 | 4 | 138 | 1 | 0 | 0 | logfile |
✔ | 6DWB | 8924 | 2023-04-24 | 2018-06-26 | 3.3 | 3.43 | — | 3.4 | 0.007 | 0.66 | 0.0 | 0.04 | 7.21 | 0.01 | 2.161 | 2.34 | 0.00 | 5.1 | 94.9 | 0.0 | -6.22 | 0.61 | 0.75 | 2.51 | 3.4 | 0.003 | 0.49 | 0.0 | 0.03 | 13.59 | 0.00 | 2.142 | 4.35 | 0.10 | 3.6 | 96.4 | 0.0 | 4.58 | 1.15 | 0.75 | 0.90 | 2.83 | 18360 | 2340 | 30 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WLR | 32591 | 2023-04-22 | 2022-01-13 | 3.54 | 3.36 | — | 3.5 | 0.006 | 0.88 | 0.0 | 0.05 | 29.42 | 0.01 | 2.232 | 3.15 | 0.00 | 1.8 | 98.2 | 0.0 | 1.65 | 0.69 | 0.75 | 2.27 | 3.5 | 0.004 | 0.56 | 0.0 | 0.03 | 28.58 | 0.00 | 2.194 | 6.62 | 0.16 | 2.4 | 97.6 | 0.0 | 2.98 | 1.22 | 0.78 | 0.83 | 2.36 | 11922 | 754 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 6PCR | 20305 | 2023-04-27 | 2019-06-18 | 2.5 | 3.04 | — | 2.9 | 0.006 | 0.47 | 0.0 | 0.03 | 13.21 | 0.03 | 1.808 | 2.72 | 2.36 | 5.2 | 94.6 | 0.2 | -3.36 | 0.72 | 0.89 | 4.33 | 2.9 | 0.005 | 0.69 | 0.0 | 0.03 | 14.91 | 0.01 | 1.905 | 6.82 | 2.36 | 6.1 | 93.9 | 0.0 | -0.53 | 1.23 | 0.72 | 0.91 | 4.47 | 72166 | 967 | 8 | 3015 | 1 | 0 | 0 | logfile |
✔ | 7XZY | 33534 | 2023-04-22 | 2022-06-03 | 3.97 | 4.47 | 3.88 | 3.9 | 0.004 | 0.69 | 0.0 | 0.04 | 28.02 | 0.00 | 2.062 | 14.33 | 0.16 | 1.9 | 98.1 | 0.0 | 1.04 | 0.83 | 0.69 | 0.95 | 4.0 | 0.004 | 0.70 | 0.0 | 0.03 | 28.73 | 0.00 | 2.040 | 9.85 | 0.63 | 3.6 | 96.4 | 0.0 | 1.77 | 2.26 | 0.92 | 0.88 | 0.97 | 12821 | 762 | 10 | 330 | 0 | 0 | 0 | logfile |
✔ | 7ZF1 | 14694 | 2023-04-21 | 2022-03-31 | 4.14 | 4.39 | 4.33 | 4.3 | 0.005 | 0.81 | 0.0 | 0.04 | 16.56 | 0.01 | 1.299 | 3.24 | 0.00 | 2.7 | 97.3 | 0.0 | 0.76 | 0.78 | 0.73 | — | 4.2 | 0.003 | 0.55 | 0.0 | 0.03 | 16.86 | 0.00 | 1.988 | 10.78 | 0.00 | 3.2 | 96.8 | 0.0 | 1.54 | 1.60 | 0.80 | 0.76 | — | 38889 | 2297 | 5 | 54 | 0 | 0 | 19431 | logfile |
✔ | 6S01 | 10069 | 2023-04-22 | 2019-06-13 | 3.2 | 3.27 | 3.17 | 3.2 | 0.008 | 0.72 | 0.0 | 0.04 | 26.34 | 0.01 | 2.284 | 3.83 | 1.82 | 3.9 | 96.1 | 0.0 | -5.85 | 0.74 | 0.77 | 3.18 | 3.2 | 0.004 | 0.60 | 0.0 | 0.03 | 27.91 | 0.00 | 2.124 | 8.90 | 0.70 | 3.4 | 96.6 | 0.0 | 0.78 | 0.51 | 0.82 | 0.85 | 2.78 | 12959 | 853 | 11 | 300 | 0 | 0 | 0 | logfile |
✔ | 7QA8 | 13880 | 2023-04-20 | 2021-11-16 | 2.7 | 2.20 | 2.66 | 2.7 | 0.009 | 1.11 | 0.0 | 0.06 | 14.61 | 0.01 | 2.323 | 1.73 | 0.75 | 3.3 | 96.7 | 0.0 | -2.98 | 0.59 | 0.79 | 2.15 | 2.5 | 0.002 | 0.61 | 0.0 | 0.03 | 16.34 | 0.00 | 2.228 | 4.64 | 3.55 | 3.3 | 96.7 | 0.0 | 2.93 | 0.41 | 0.59 | 0.80 | 2.30 | 6111 | 622 | 11 | 0 | 38 | 70 | 0 | logfile |
✔ | 7RZR | 24775 | 2023-04-19 | 2021-08-27 | 2.27 | 2.24 | — | 2.0 | 0.007 | 0.40 | 0.0 | 0.04 | 14.34 | 0.00 | 2.436 | 3.23 | 0.00 | 1.9 | 98.1 | 0.0 | 2.50 | 0.79 | 0.80 | 3.37 | 2.0 | 0.002 | 0.36 | 0.0 | 0.03 | 15.29 | 0.00 | 2.294 | 4.44 | 0.71 | 0.0 | 100.0 | 0.0 | 6.53 | 0.31 | 0.81 | 0.83 | 3.42 | 2448 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WAY | 32389 | 2023-04-22 | 2021-12-15 | 2.9 | 3.11 | — | 2.9 | 0.004 | 0.54 | 0.0 | 0.04 | 16.63 | 0.00 | 2.172 | 5.59 | 0.00 | 2.8 | 97.2 | 0.0 | 1.31 | 0.87 | 0.85 | 2.73 | 2.9 | 0.003 | 0.55 | 0.0 | 0.03 | 17.63 | 0.00 | 2.212 | 5.59 | 1.31 | 2.1 | 97.9 | 0.0 | 1.76 | 0.33 | 0.89 | 0.88 | 2.37 | 11453 | 960 | 4 | 175 | 0 | 0 | 0 | logfile |
✔ | 7RZT | 24777 | 2023-04-19 | 2021-08-27 | 2.35 | 2.27 | — | 2.1 | 0.005 | 0.32 | 0.0 | 0.03 | 14.89 | 0.00 | 2.388 | 3.83 | 0.00 | 2.9 | 97.1 | 0.0 | 2.81 | 0.77 | 0.79 | 2.62 | 2.0 | 0.003 | 0.32 | 0.0 | 0.03 | 15.52 | 0.00 | 2.337 | 5.44 | 0.35 | 0.0 | 100.0 | 0.0 | 6.26 | 0.24 | 0.80 | 0.83 | 2.93 | 2451 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZQ | 24774 | 2023-04-19 | 2021-08-27 | 2.09 | 2.26 | — | 2.7 | 0.006 | 0.40 | 0.0 | 0.03 | 14.23 | 0.00 | 2.339 | 4.69 | 0.00 | 1.9 | 98.1 | 0.0 | 2.15 | 0.78 | 0.79 | 1.56 | 2.0 | 0.003 | 0.31 | 0.0 | 0.03 | 15.07 | 0.00 | 2.343 | 5.71 | 0.00 | 0.0 | 100.0 | 0.0 | 5.84 | 0.30 | 0.82 | 0.82 | 2.01 | 2421 | 322 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TAN | 25777 | 2023-04-22 | 2021-12-21 | 3.0 | 2.95 | — | 3.1 | 0.003 | 0.47 | 0.0 | 0.03 | 27.32 | 0.00 | 2.287 | 3.25 | 0.00 | 2.8 | 97.2 | 0.0 | 2.18 | 0.82 | 0.85 | 2.22 | 3.1 | 0.004 | 0.51 | 0.0 | 0.03 | 27.86 | 0.00 | 2.221 | 2.61 | 0.78 | 2.0 | 98.0 | 0.0 | 2.33 | 0.33 | 0.83 | 0.87 | 2.17 | 12119 | 768 | 12 | 294 | 0 | 0 | 0 | logfile |
✔ | 7EG6 | 31106 | 2023-04-22 | 2021-03-24 | 3.1 | 3.55 | — | 3.2 | 0.007 | 0.73 | 0.0 | 0.04 | 27.64 | 0.01 | 2.328 | 1.56 | 0.00 | 0.9 | 99.1 | 0.0 | -1.78 | 0.88 | 0.86 | 3.75 | 3.2 | 0.004 | 0.55 | 0.0 | 0.03 | 28.24 | 0.00 | 2.190 | 5.69 | 0.16 | 1.7 | 98.3 | 0.0 | 3.31 | 1.16 | 0.89 | 0.88 | 2.59 | 12118 | 779 | 11 | 292 | 0 | 0 | 0 | logfile |
✔ | 7X57 | 33010 | 2023-04-21 | 2022-03-04 | 3.63 | 3.95 | — | 3.8 | 0.003 | 0.63 | 0.0 | 0.03 | 28.98 | 0.01 | 2.286 | 9.90 | 0.20 | 1.4 | 98.6 | 0.0 | 0.39 | 0.82 | 0.76 | 1.31 | 3.8 | 0.003 | 0.64 | 0.0 | 0.03 | 29.85 | 0.00 | 2.269 | 13.03 | 0.99 | 2.6 | 97.4 | 0.0 | 2.84 | 0.69 | 0.83 | 0.79 | 1.19 | 9767 | 595 | 10 | 242 | 0 | 0 | 0 | logfile |
✔ | 7WiJ | 32531 | 2023-04-22 | 2022-01-03 | 3.17 | 3.08 | 3.01 | 3.2 | 0.002 | 0.50 | 0.0 | 0.03 | 14.49 | 0.00 | 2.243 | 4.52 | 0.00 | 0.4 | 99.6 | 0.0 | 2.75 | 0.70 | 0.85 | 1.82 | 3.2 | 0.003 | 0.53 | 0.0 | 0.03 | 15.57 | 0.00 | 2.262 | 4.68 | 0.00 | 0.8 | 99.2 | 0.0 | 3.40 | 0.26 | 0.71 | 0.87 | 1.79 | 12396 | 1602 | 6 | 0 | 0 | 0 | 0 | logfile |