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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6ZGi | 11207 | 2023-04-28 | 2020-06-18 | 2.9 | 3.12 | 3.02 | 3.1 | 0.007 | 0.80 | 0.0 | 0.05 | 12.59 | 0.00 | 2.317 | 1.64 | 0.73 | 4.2 | 95.7 | 0.1 | -0.93 | 0.75 | 0.83 | 4.10 | 3.1 | 0.003 | 0.59 | 0.0 | 0.04 | 14.86 | 0.00 | 2.162 | 2.74 | 1.43 | 4.3 | 95.7 | 0.0 | -0.51 | 1.19 | 0.74 | 0.84 | 3.87 | 26901 | 3294 | 33 | 0 | 78 | 0 | 0 | logfile |
✔ | 7STo | 25435 | 2023-04-27 | 2021-11-14 | 3.15 | 3.45 | — | 3.3 | 0.007 | 0.82 | 0.0 | 0.04 | 10.39 | 0.00 | 2.289 | 1.13 | 0.15 | 2.3 | 97.7 | 0.0 | 1.91 | 0.68 | 0.82 | 3.05 | 3.3 | 0.003 | 0.46 | 0.0 | 0.04 | 12.87 | 0.00 | 2.194 | 2.76 | 0.15 | 3.1 | 96.7 | 0.1 | 1.88 | 1.23 | 0.70 | 0.86 | 2.74 | 25210 | 1580 | 4 | 0 | 10 | 0 | 12268 | logfile |
✔ | 7STL | 25432 | 2023-04-27 | 2021-11-14 | 2.95 | 3.30 | — | 3.2 | 0.004 | 0.75 | 0.0 | 0.04 | 10.31 | 0.00 | 2.190 | 0.38 | 0.15 | 2.3 | 97.7 | 0.0 | 1.82 | 0.67 | 0.82 | 3.24 | 3.2 | 0.004 | 0.48 | 0.0 | 0.04 | 13.91 | 0.00 | 2.104 | 2.76 | 0.59 | 3.5 | 96.3 | 0.1 | 1.65 | 0.57 | 0.66 | 0.84 | 3.21 | 25668 | 1600 | 4 | 0 | 8 | 0 | 12568 | logfile |
✔ | 7USA | 26730 | 2023-04-27 | 2022-04-23 | 2.8 | 2.94 | 2.77 | 3.0 | 0.015 | 1.60 | 18.0 | 0.13 | 9.68 | 0.01 | 1.968 | 1.95 | 0.04 | 3.5 | 96.2 | 0.3 | 0.09 | 0.75 | 0.85 | 4.68 | 3.0 | 0.003 | 0.60 | 0.0 | 0.05 | 13.70 | 0.00 | 2.280 | 2.78 | 1.61 | 2.1 | 97.8 | 0.1 | 0.63 | 0.99 | 0.74 | 0.90 | 4.16 | 24307 | 3181 | 33 | 0 | 90 | 0 | 0 | logfile |
✔ | 7KPW | 22990 | 2023-04-20 | 2020-11-12 | 4.9 | 5.04 | 4.74 | 4.9 | 0.009 | 1.54 | 4.0 | 0.10 | 1.89 | 0.01 | 2.279 | 3.61 | 0.00 | 3.9 | 94.9 | 1.2 | 4.09 | 0.75 | 0.67 | — | 4.9 | 0.003 | 0.73 | 0.0 | 0.04 | 5.85 | 0.00 | 2.148 | 2.79 | 0.00 | 11.5 | 87.9 | 0.6 | -0.50 | 2.04 | 0.82 | 0.82 | — | 4313 | 865 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BH9 | 12187 | 2023-04-20 | 2021-01-11 | 2.9 | 3.58 | 2.91 | 3.4 | 0.007 | 0.77 | 0.0 | 0.05 | 13.27 | 0.00 | 2.021 | 5.17 | 0.33 | 4.9 | 95.1 | 0.0 | -3.10 | 0.85 | 0.88 | 3.70 | 3.4 | 0.002 | 0.54 | 0.0 | 0.04 | 15.07 | 0.00 | 2.180 | 2.80 | 1.33 | 1.9 | 98.1 | 0.0 | 0.68 | 0.39 | 0.80 | 0.83 | 2.63 | 5876 | 730 | 3 | 0 | 4 | 0 | 0 | logfile |
✔ | 7SoE | 25268 | 2023-04-27 | 2021-10-29 | 2.8 | 2.87 | 2.84 | 2.8 | 0.010 | 1.29 | 0.0 | 0.07 | 9.88 | 0.01 | 2.416 | 1.06 | 0.15 | 2.0 | 98.0 | 0.0 | 0.29 | 0.74 | 0.80 | 3.95 | 2.8 | 0.002 | 0.60 | 0.0 | 0.05 | 13.26 | 0.00 | 2.198 | 2.81 | 1.79 | 1.7 | 98.3 | 0.0 | 0.97 | 1.02 | 0.73 | 0.84 | 3.06 | 25947 | 3783 | 15 | 0 | 57 | 0 | 0 | logfile |
✔ | 6oVH | 20212 | 2023-04-21 | 2019-05-07 | 2.6 | 2.81 | 2.71 | 2.8 | 0.014 | 1.10 | 0.0 | 0.04 | 17.48 | 0.01 | 1.203 | 1.15 | 4.55 | 1.0 | 99.0 | 0.0 | -6.34 | 0.75 | 0.87 | 4.63 | 2.8 | 0.003 | 0.75 | 0.0 | 0.04 | 18.69 | 0.00 | 2.055 | 2.87 | 0.38 | 0.8 | 99.2 | 0.0 | 2.63 | 0.98 | 0.77 | 0.89 | 3.77 | 10895 | 1272 | 36 | 0 | 68 | 171 | 0 | logfile |
✔ | 7NPS | 12518 | 2023-04-20 | 2021-02-28 | 3.81 | 3.93 | 3.82 | 3.9 | 0.010 | 1.15 | 6.0 | 0.08 | 11.02 | 0.01 | 2.182 | 1.23 | 0.00 | 2.5 | 97.5 | 0.0 | -1.44 | 0.82 | 0.82 | 2.59 | 3.9 | 0.002 | 0.59 | 0.0 | 0.05 | 12.84 | 0.00 | 1.895 | 2.91 | 0.00 | 1.8 | 98.2 | 0.0 | -0.02 | 0.68 | 0.83 | 0.83 | 2.26 | 55350 | 3732 | 9 | 0 | 0 | 0 | 27681 | logfile |
✔ | 7PKB | 13467 | 2023-04-23 | 2021-08-25 | 3.2 | 2.68 | 3.08 | 3.1 | 0.008 | 0.90 | 0.0 | 0.14 | 13.28 | 0.01 | 1.950 | 3.97 | 0.00 | 5.1 | 94.8 | 0.1 | -0.98 | 0.72 | 0.85 | 5.32 | 3.2 | 0.003 | 0.70 | 0.0 | 0.14 | 13.54 | 0.00 | 2.127 | 2.91 | 0.00 | 3.4 | 96.6 | 0.0 | -0.34 | 0.58 | 0.73 | 0.87 | 4.70 | 16145 | 1030 | 15 | 0 | 10 | 5 | 7970 | logfile |
✔ | 7TM0 | 25992 | 2023-04-28 | 2022-01-19 | 3.1 | 3.24 | 3.21 | 3.2 | 0.010 | 1.37 | 0.0 | 0.08 | 8.70 | 0.01 | 2.264 | 1.47 | 0.17 | 2.4 | 97.6 | 0.0 | 0.62 | 0.73 | 0.76 | 3.91 | 3.2 | 0.005 | 0.67 | 0.0 | 0.05 | 11.92 | 0.00 | 2.154 | 2.97 | 0.17 | 3.4 | 96.6 | 0.0 | 0.35 | 1.30 | 0.78 | 0.83 | 3.63 | 27963 | 4401 | 19 | 0 | 52 | 0 | 0 | logfile |
✔ | 8CVN | 27010 | 2023-04-20 | 2022-05-18 | 2.4 | 3.23 | 2.42 | 3.1 | 0.014 | 1.53 | 3.0 | 0.08 | 17.97 | 0.00 | 2.524 | 1.49 | 1.21 | 2.4 | 97.6 | 0.0 | 0.60 | 0.84 | 0.87 | 3.98 | 3.1 | 0.002 | 0.82 | 0.0 | 0.04 | 18.09 | 0.00 | 2.305 | 2.98 | 2.17 | 1.6 | 98.4 | 0.0 | 1.58 | 0.81 | 0.76 | 0.87 | 3.33 | 4054 | 512 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7LiS | 23384 | 2023-04-27 | 2021-01-27 | 2.96 | 3.25 | — | 3.2 | 0.008 | 0.79 | 0.0 | 0.06 | 14.46 | 0.00 | 2.214 | 2.81 | 3.45 | 3.5 | 96.5 | 0.0 | 0.22 | 0.75 | 0.88 | 4.54 | 3.2 | 0.003 | 0.51 | 0.0 | 0.04 | 16.57 | 0.00 | 2.171 | 3.00 | 1.80 | 3.1 | 96.9 | 0.0 | 0.66 | 0.34 | 0.77 | 0.89 | 3.19 | 128880 | 15660 | 60 | 0 | 60 | 0 | 0 | logfile |
✔ | 7DZY | 30921 | 2023-04-24 | 2021-01-26 | 3.6 | 3.83 | 3.38 | 3.1 | 0.020 | 2.12 | 0.0 | 0.00 | 4.32 | 0.01 | 1.980 | 3.14 | 0.00 | 3.7 | 95.4 | 0.9 | -0.42 | 0.43 | 0.27 | — | 3.3 | 0.003 | 0.83 | 0.0 | 0.00 | 5.21 | 0.00 | 2.105 | 3.02 | 0.00 | 10.5 | 89.3 | 0.2 | -2.46 | 2.13 | 0.71 | 0.70 | — | 18708 | 4677 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7S8N | 24898 | 2023-04-20 | 2021-09-18 | 2.9 | 2.20 | 2.92 | 2.1 | 0.012 | 0.90 | 0.0 | 0.06 | 13.04 | 0.01 | 2.202 | 4.10 | 0.00 | 5.1 | 94.9 | 0.0 | -0.33 | 0.79 | 0.80 | 3.96 | 2.1 | 0.004 | 0.60 | 0.0 | 0.04 | 15.91 | 0.00 | 2.215 | 3.02 | 1.47 | 3.2 | 96.8 | 0.0 | 0.80 | 1.01 | 0.82 | 0.83 | 2.92 | 8154 | 1090 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7R5M | 14331 | 2023-04-22 | 2022-02-11 | 3.3 | 3.09 | 3.20 | 3.2 | 0.006 | 0.94 | 0.0 | 0.06 | 14.64 | 0.00 | 2.411 | 1.26 | 0.80 | 4.6 | 95.4 | 0.0 | -0.79 | 0.70 | 0.80 | 2.46 | 3.1 | 0.003 | 0.56 | 0.0 | 0.04 | 16.00 | 0.00 | 2.111 | 3.04 | 0.08 | 1.6 | 98.4 | 0.0 | 1.73 | 1.36 | 0.70 | 0.86 | 2.07 | 11295 | 1491 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M05 | 23609 | 2023-04-20 | 2021-03-10 | 2.39 | 2.66 | 2.49 | 2.6 | 0.013 | 0.89 | 0.0 | 0.06 | 14.64 | 0.01 | 2.064 | 3.66 | 0.50 | 6.9 | 92.3 | 0.8 | -3.01 | 0.75 | 0.81 | 4.52 | 2.6 | 0.004 | 0.63 | 0.0 | 0.05 | 16.24 | 0.00 | 2.046 | 3.05 | 1.19 | 3.6 | 96.3 | 0.1 | 0.16 | 1.27 | 0.79 | 0.84 | 4.23 | 57152 | 3636 | 12 | 0 | 4 | 0 | 28188 | logfile |
✔ | 7oD3 | 12818 | 2023-04-26 | 2021-04-28 | 2.8 | 2.59 | 3.00 | 2.7 | 0.004 | 0.61 | 0.0 | 0.05 | 14.00 | 0.00 | 1.953 | 2.55 | 0.23 | 4.8 | 95.2 | 0.0 | -1.05 | 0.73 | 0.81 | 3.95 | 2.7 | 0.007 | 0.78 | 0.0 | 0.05 | 16.38 | 0.01 | 2.113 | 3.07 | 2.32 | 5.5 | 94.5 | 0.0 | -0.87 | 0.30 | 0.75 | 0.85 | 3.90 | 24222 | 3036 | 6 | 0 | 36 | 0 | 0 | logfile |
✔ | 7MQE | 23944 | 2023-04-26 | 2021-05-05 | 3.69 | 3.22 | 3.67 | 3.5 | 0.008 | 0.84 | 0.0 | 0.06 | 13.45 | 0.00 | 2.308 | 1.58 | 0.77 | 1.7 | 98.3 | 0.0 | 0.67 | 0.75 | 0.81 | 3.89 | 3.5 | 0.006 | 0.60 | 0.0 | 0.05 | 14.01 | 0.00 | 2.248 | 3.07 | 0.29 | 3.6 | 96.4 | 0.0 | 1.06 | 0.41 | 0.79 | 0.84 | 3.33 | 12163 | 1629 | 16 | 16 | 0 | 0 | 0 | logfile |
✔ | 8FHP | 29098 | 2023-04-20 | 2022-12-14 | 3.04 | 3.38 | 3.13 | 3.3 | 0.009 | 0.80 | 0.0 | 0.05 | 13.08 | 0.01 | 2.227 | 5.38 | 0.39 | 3.8 | 96.2 | 0.0 | -1.88 | 0.61 | 0.85 | 2.63 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 15.04 | 0.00 | 2.254 | 3.07 | 0.39 | 2.5 | 97.5 | 0.0 | 0.71 | 0.34 | 0.56 | 0.84 | 2.14 | 7306 | 950 | 4 | 0 | 4 | 0 | 0 | logfile |