The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7KPW | 22990 | 2022-05-12 | 2020-11-12 | 4.9 | 5.04 | 4.74 | 4.9 | 0.009 | 1.54 | 4.0 | 0.10 | 1.89 | 0.01 | 2.279 | 3.61 | 0.00 | 3.9 | 94.9 | 1.2 | 4.09 | 0.75 | 0.67 | — | 4.8 | 0.005 | 0.86 | 0.0 | 0.04 | 6.91 | 0.00 | 2.059 | 5.41 | 0.00 | 14.6 | 84.8 | 0.6 | -1.66 | 2.04 | 0.83 | 0.83 | — | 4313 | 865 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6MZJ | 9303 | 2022-05-13 | 2018-11-05 | 4.8 | 5.06 | — | 4.4 | 0.014 | 1.50 | 0.0 | 0.08 | 8.01 | 0.00 | 2.352 | 1.32 | 2.65 | 3.2 | 96.6 | 0.1 | -0.18 | 0.70 | 0.72 | — | 4.5 | 0.004 | 0.77 | 0.0 | 0.05 | 7.02 | 0.00 | 2.212 | 5.11 | 0.00 | 7.1 | 92.9 | 0.1 | -1.34 | 2.19 | 0.77 | 0.65 | — | 12653 | 2088 | 10 | 0 | 149 | 0 | 0 | logfile |
✔ | 6oR5 | 9032 | 2022-05-13 | 2019-04-29 | 4.0 | 4.23 | — | 3.9 | 0.008 | 1.12 | 0.0 | 0.05 | 10.85 | 0.00 | 2.245 | 4.84 | 0.00 | 17.3 | 82.4 | 0.3 | -5.53 | 0.76 | 0.79 | — | 3.9 | 0.002 | 0.56 | 0.0 | 0.04 | 7.06 | 0.00 | 2.221 | 3.09 | 0.00 | 12.5 | 87.5 | 0.0 | -0.20 | 1.35 | 0.78 | 0.79 | — | 10364 | 2058 | 1 | 0 | 5 | 0 | 0 | logfile |
✔ | 7JG7 | 22313 | 2022-05-14 | 2020-07-18 | 3.5 | 2.41 | 3.57 | 3.4 | 0.008 | 1.54 | 0.0 | 0.00 | 6.82 | 0.01 | 2.433 | 0.00 | 0.00 | 2.9 | 96.9 | 0.1 | -0.73 | 0.63 | 0.55 | — | 2.3 | 0.006 | 1.15 | 0.0 | 0.00 | 7.25 | 0.01 | 2.136 | 3.94 | 0.00 | 14.0 | 85.9 | 0.1 | -2.12 | 1.65 | 0.74 | 0.72 | — | 19316 | 4818 | 20 | 0 | 11 | 0 | 0 | logfile |
✔ | 7JG9 | 22315 | 2022-05-14 | 2020-07-18 | 3.4 | 2.37 | 3.49 | 3.4 | 0.009 | 1.55 | 0.0 | 0.20 | 7.47 | 0.01 | 2.424 | 0.51 | 0.00 | 2.9 | 96.8 | 0.3 | -1.25 | 0.61 | 0.54 | — | 3.4 | 0.006 | 1.09 | 0.0 | 0.09 | 7.30 | 0.01 | 2.145 | 4.77 | 0.00 | 17.1 | 82.8 | 0.1 | -2.40 | 1.34 | 0.72 | 0.71 | — | 19569 | 4826 | 26 | 0 | 7 | 0 | 0 | logfile |
✔ | 6TNG | 10532 | 2022-05-12 | 2019-12-07 | 4.1 | 4.25 | 3.91 | 4.0 | 0.008 | 1.39 | 0.0 | 0.00 | 8.74 | 0.01 | 2.183 | 11.35 | 0.00 | 18.9 | 80.2 | 0.8 | -5.16 | 0.75 | 0.70 | — | 4.0 | 0.006 | 1.02 | 0.0 | 0.00 | 7.42 | 0.01 | 2.133 | 21.25 | 0.00 | 25.4 | 74.3 | 0.3 | -3.93 | 0.35 | 0.76 | 0.72 | — | 8240 | 2060 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RRS | 4989 | 2022-05-16 | 2019-05-20 | 3.9 | 4.30 | 4.41 | 3.8 | 0.013 | 2.10 | 0.0 | 0.00 | 2.04 | 0.01 | 2.364 | 0.79 | 0.00 | 3.9 | 95.3 | 0.8 | -0.85 | 0.56 | 0.64 | — | 3.8 | 0.004 | 0.88 | 0.0 | 0.00 | 7.55 | 0.00 | 2.175 | 1.89 | 0.00 | 14.6 | 85.4 | 0.0 | -1.44 | 2.05 | 0.80 | 0.71 | — | 93060 | 23220 | 180 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PZi | 20535 | 2022-05-12 | 2019-07-31 | 4.5 | 4.80 | — | 4.4 | 0.005 | 1.13 | 0.0 | 0.05 | 7.87 | 0.01 | 2.253 | 2.60 | 0.00 | 6.3 | 93.7 | 0.0 | -3.83 | 0.67 | 0.80 | — | 4.4 | 0.003 | 0.66 | 0.0 | 0.04 | 7.87 | 0.00 | 2.155 | 7.72 | 0.00 | 3.5 | 96.5 | 0.0 | 1.89 | 0.55 | 0.68 | 0.83 | — | 7985 | 1412 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6XTB | 10618 | 2022-05-12 | 2020-01-15 | 4.3 | 4.32 | — | 3.9 | 0.006 | 1.17 | 0.0 | 0.07 | 8.68 | 0.00 | 2.369 | 3.00 | 0.00 | 15.6 | 84.4 | 0.0 | -4.66 | 0.32 | 0.43 | — | 4.1 | 0.004 | 1.06 | 0.0 | 0.05 | 7.90 | 0.00 | 2.205 | 9.62 | 0.00 | 22.1 | 77.9 | 0.0 | -5.53 | 2.43 | 0.34 | 0.64 | — | 1161 | 235 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JLX | 22383 | 2022-05-12 | 2020-07-30 | 4.6 | 3.86 | — | 3.7 | 0.001 | 0.42 | 0.0 | 0.04 | 3.80 | 0.00 | 2.240 | 2.96 | 0.00 | 6.7 | 93.3 | 0.0 | 1.23 | 0.54 | 0.51 | — | 3.8 | 0.004 | 0.84 | 0.0 | 0.04 | 7.94 | 0.00 | 2.314 | 8.45 | 0.00 | 18.9 | 81.1 | 0.0 | -3.03 | 2.40 | 0.47 | 0.53 | — | 3288 | 664 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oDJ | 20021 | 2022-05-15 | 2019-03-26 | 3.5 | 3.75 | — | 3.7 | 0.009 | 1.50 | 0.0 | 0.07 | 11.32 | 0.01 | 2.438 | 2.03 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.81 | 0.81 | — | 3.7 | 0.012 | 1.73 | 0.0 | 0.06 | 7.95 | 0.00 | 2.092 | 10.66 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.60 | 0.82 | 0.83 | — | 25415 | 0 | 17 | 0 | 5083 | 0 | 0 | logfile |
✔ | 7R9K | 24328 | 2022-05-12 | 2021-06-29 | 4.1 | 4.93 | — | 4.0 | 0.002 | 0.35 | 0.0 | 0.04 | 4.65 | 0.00 | 2.223 | 3.37 | 0.00 | 10.3 | 89.1 | 0.6 | -4.05 | 0.83 | 0.71 | — | 4.1 | 0.002 | 0.52 | 0.0 | 0.04 | 8.10 | 0.00 | 1.907 | 9.32 | 0.00 | 5.0 | 95.0 | 0.0 | 0.38 | 1.77 | 0.89 | 0.83 | — | 7726 | 505 | 1 | 0 | 0 | 0 | 3938 | logfile |
✔ | 5J8V | 8073 | 2022-05-15 | 2016-04-08 | 4.9 | 4.81 | — | 4.7 | 0.024 | 2.66 | 214.0 | 0.16 | 10.17 | 0.01 | 1.145 | 73.71 | 28.71 | 6.2 | 86.5 | 7.3 | 2.50 | 0.71 | 0.67 | — | 4.7 | 0.003 | 1.16 | 0.0 | 0.04 | 8.22 | 0.00 | 2.233 | 4.75 | 0.32 | 11.9 | 86.0 | 2.1 | -1.61 | 0.83 | 0.74 | 0.72 | — | 73616 | 13812 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HYP | 0309 | 2022-05-13 | 2018-10-22 | 4.4 | 4.53 | — | 4.4 | 0.003 | 0.72 | 0.0 | 0.05 | 8.72 | 0.00 | 1.943 | 1.67 | 0.34 | 7.3 | 92.2 | 0.4 | -5.99 | 0.75 | 0.69 | — | 4.4 | 0.002 | 0.67 | 0.0 | 0.04 | 8.23 | 0.00 | 2.173 | 3.43 | 0.00 | 7.0 | 92.9 | 0.1 | -1.16 | 0.61 | 0.76 | 0.73 | — | 12392 | 2082 | 1 | 0 | 192 | 0 | 0 | logfile |
✔ | 7NT6 | 12584 | 2022-05-15 | 2021-03-09 | 4.3 | 4.34 | 3.99 | 3.3 | 0.012 | 2.07 | 0.0 | 0.15 | 8.75 | 0.01 | 2.119 | 1.13 | 0.00 | 4.0 | 95.6 | 0.3 | -2.44 | 0.72 | 0.76 | — | 3.2 | 0.003 | 0.66 | 0.0 | 0.05 | 8.24 | 0.00 | 2.143 | 3.83 | 0.00 | 6.3 | 93.7 | 0.0 | 2.06 | 0.62 | 0.71 | 0.72 | — | 24128 | 5582 | 17 | 90 | 0 | 0 | 0 | logfile |
✔ | 7BZX | 30262 | 2022-05-12 | 2020-04-28 | 4.0 | 4.19 | — | 3.2 | 0.019 | 2.22 | 9.0 | 0.12 | 8.56 | 0.01 | 2.485 | 2.40 | 0.00 | 6.6 | 92.1 | 1.3 | -2.90 | 0.47 | 0.25 | — | 2.9 | 0.004 | 1.07 | 0.0 | 0.05 | 8.41 | 0.00 | 2.068 | 18.09 | 0.00 | 18.4 | 81.5 | 0.1 | -5.13 | 3.15 | 0.75 | 0.57 | — | 5652 | 1154 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oG3 | 20051 | 2022-05-12 | 2019-04-01 | 4.1 | 5.37 | — | 6.5 | 0.005 | 1.53 | 0.0 | 0.00 | 0.93 | 0.00 | 2.539 | 0.00 | 0.00 | 0.0 | 99.2 | 0.8 | 0.27 | 0.46 | 0.48 | — | 6.0 | 0.006 | 1.22 | 0.0 | 0.00 | 8.59 | 0.00 | 2.605 | 57.07 | 0.00 | 14.1 | 85.9 | 0.0 | -1.78 | 2.19 | 0.66 | 0.84 | — | 1215 | 396 | 4 | 0 | 9 | 0 | 0 | logfile |
✔ | 6PZB | 20533 | 2022-05-12 | 2019-07-31 | 4.55 | 4.69 | — | 4.5 | 0.009 | 1.24 | 0.0 | 0.06 | 8.37 | 0.01 | 2.231 | 3.11 | 0.00 | 5.9 | 94.1 | 0.0 | -3.87 | 0.62 | 0.76 | — | 4.5 | 0.003 | 0.67 | 0.0 | 0.04 | 8.60 | 0.00 | 1.999 | 7.02 | 0.00 | 5.3 | 94.7 | 0.0 | 1.22 | 0.58 | 0.64 | 0.77 | — | 7747 | 1357 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R9U | 24331 | 2022-05-12 | 2021-06-29 | 4.4 | 5.41 | — | 4.3 | 0.002 | 0.34 | 0.0 | 0.04 | 4.36 | 0.00 | 2.248 | 3.50 | 0.00 | 9.1 | 90.3 | 0.6 | -4.49 | 0.78 | 0.62 | — | 4.3 | 0.003 | 0.53 | 0.0 | 0.04 | 8.66 | 0.00 | 1.913 | 10.10 | 0.00 | 3.8 | 96.2 | 0.0 | 0.26 | 2.39 | 0.91 | 0.84 | — | 7727 | 505 | 1 | 0 | 0 | 0 | 3939 | logfile |
✔ | 6Q0J | 20550 | 2022-05-12 | 2019-08-01 | 4.9 | 4.69 | — | 4.1 | 0.012 | 1.53 | 3.0 | 0.09 | 8.19 | 0.00 | 2.229 | 2.10 | 0.00 | 5.4 | 93.3 | 1.3 | -2.84 | 0.74 | 0.63 | — | 4.2 | 0.003 | 0.67 | 0.0 | 0.04 | 8.66 | 0.00 | 1.906 | 7.06 | 0.00 | 7.0 | 92.7 | 0.4 | -0.02 | 1.64 | 0.85 | 0.79 | — | 8213 | 1633 | 8 | 0 | 6 | 0 | 0 | logfile |