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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8iDC | 35363 | 2024-03-14 | 2023-02-12 | 3.9 | 5.12 | 3.90 | 3.9 | 0.004 | 1.02 | 0.0 | 0.05 | 10.68 | 0.01 | 2.221 | 5.95 | 0.00 | 6.9 | 92.9 | 0.2 | -3.33 | 0.77 | 0.83 | -0.28 | 3.9 | 0.004 | 0.72 | 0.0 | 0.04 | 12.29 | 0.00 | 2.093 | 21.46 | 1.49 | 8.2 | 91.7 | 0.1 | -1.22 | 0.43 | 0.77 | 0.84 | 0.06 | 9701 | 1342 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8P2M | 17370 | 2024-03-25 | 2023-05-16 | 3.82 | 5.95 | 4.51 | 4.2 | 0.012 | 1.85 | 111.0 | 0.14 | 13.83 | 0.01 | 2.190 | 2.42 | 1.90 | 4.5 | 95.5 | 0.0 | -1.71 | 0.87 | 0.76 | -0.22 | 4.2 | 0.003 | 0.78 | 0.0 | 0.04 | 15.24 | 0.00 | 2.096 | 18.16 | 1.41 | 3.2 | 96.8 | 0.0 | 1.38 | 0.83 | 0.88 | 0.76 | 0.07 | 46702 | 5819 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TR8 | 26082 | 2024-03-22 | 2022-01-28 | 3.6 | 4.39 | — | 4.1 | 0.002 | 0.54 | 0.0 | 0.04 | 14.97 | 0.00 | 2.037 | 11.91 | 0.03 | 7.5 | 92.2 | 0.4 | -1.00 | 0.75 | 0.46 | -0.02 | 4.1 | 0.003 | 0.82 | 0.0 | 0.05 | 17.20 | 0.00 | 2.087 | 20.94 | 2.24 | 8.3 | 91.4 | 0.3 | -1.71 | 2.18 | 0.83 | 0.70 | 0.07 | 33581 | 4192 | 18 | 45 | 2 | 0 | 0 | logfile |
✔ | 6iP1 | 9697 | 2024-03-15 | 2018-11-01 | 3.9 | 4.05 | — | 4.0 | 0.006 | 1.03 | 0.0 | 0.05 | 11.71 | 0.00 | 1.321 | 7.91 | 0.34 | 7.5 | 92.5 | 0.0 | -5.85 | 0.59 | 0.72 | 1.01 | 4.0 | 0.005 | 1.26 | 2.0 | 0.04 | 18.59 | 0.01 | 1.977 | 21.93 | 4.49 | 8.1 | 91.8 | 0.1 | -0.73 | 1.22 | 0.61 | 0.75 | 0.08 | 11245 | 1420 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 8D6X | 27225 | 2024-03-15 | 2022-06-06 | 3.2 | 10.22 | — | — | 0.003 | 0.62 | 0.0 | 0.04 | 12.14 | 0.00 | 2.195 | 17.76 | 0.06 | 2.6 | 97.4 | 0.0 | 1.17 | 0.70 | 0.42 | 0.14 | — | 0.003 | 0.64 | 0.0 | 0.04 | 14.47 | 0.00 | 2.075 | 23.67 | 1.42 | 4.1 | 95.9 | 0.0 | 0.67 | 4.63 | 0.58 | 0.33 | 0.09 | 68362 | 8957 | 41 | 0 | 0 | 0 | 0 | logfile |
✔ | 6A7F | 6993 | 2024-03-15 | 2018-07-03 | 3.4 | 3.51 | — | 3.4 | 0.014 | 1.17 | 0.0 | 0.06 | 11.20 | 0.01 | 2.271 | 4.26 | 0.00 | 0.0 | 100.0 | 0.0 | -2.13 | 0.55 | 0.84 | 0.56 | 3.4 | 0.003 | 0.69 | 0.0 | 0.04 | 17.57 | 0.00 | 2.172 | 14.38 | 3.17 | 0.5 | 99.5 | 0.0 | 2.16 | 2.03 | 0.60 | 0.87 | 0.10 | 10830 | 1410 | 30 | 0 | 0 | 0 | 0 | logfile |
✔ | 6H5i | 0140 | 2024-03-10 | 2018-07-24 | 3.9 | 3.87 | — | 23.0 | 0.006 | 0.81 | 0.0 | 0.05 | 10.47 | 0.01 | 2.196 | 2.64 | 0.17 | 4.3 | 95.7 | 0.0 | -1.74 | 0.29 | 0.06 | 0.15 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 15.27 | 0.00 | 2.073 | 14.15 | 1.77 | 3.2 | 96.8 | 0.0 | 1.17 | 1.26 | 0.37 | 0.25 | 0.10 | 43900 | 5392 | 26 | 0 | 0 | 0 | 0 | logfile |
✔ | 7o3X | 12711 | 2024-03-24 | 2021-04-03 | 3.9 | 4.85 | 4.22 | 6.5 | 0.017 | 1.96 | 0.0 | 0.11 | 18.05 | 0.01 | 0.321 | 15.91 | 1.39 | 1.6 | 97.8 | 0.6 | 2.94 | 0.58 | 0.46 | -0.41 | 4.4 | 0.006 | 1.16 | 1.0 | 0.05 | 19.95 | 0.01 | 2.016 | 38.87 | 3.82 | 2.2 | 97.7 | 0.1 | 1.24 | 2.44 | 0.77 | 0.85 | 0.11 | 148395 | 19290 | 105 | 0 | 15 | 0 | 0 | logfile |
✔ | 7WU7 | 32823 | 2024-03-14 | 2022-02-07 | 3.85 | 3.66 | 4.04 | 3.8 | 0.005 | 0.81 | 0.0 | 0.05 | 14.10 | 0.00 | 2.146 | 18.27 | 0.01 | 5.3 | 94.7 | 0.1 | -1.14 | 0.70 | 0.65 | 0.47 | 3.8 | 0.003 | 0.79 | 0.0 | 0.04 | 16.60 | 0.00 | 2.070 | 20.17 | 3.30 | 5.9 | 94.1 | 0.0 | -1.22 | 1.15 | 0.70 | 0.68 | 0.11 | 67031 | 8727 | 26 | 0 | 4 | 0 | 0 | logfile |
✔ | 6SE0 | 10151 | 2024-03-15 | 2019-07-29 | 3.8 | 4.73 | — | 4.6 | 0.009 | 1.01 | 0.0 | 0.06 | 28.08 | 0.01 | 2.248 | 4.43 | 0.00 | 0.9 | 99.1 | 0.0 | -2.82 | 0.80 | 0.78 | 0.85 | 4.6 | 0.003 | 0.65 | 0.0 | 0.03 | 28.07 | 0.00 | 2.148 | 12.93 | 3.19 | 1.7 | 98.3 | 0.0 | 0.98 | 0.65 | 0.80 | 0.77 | 0.11 | 12002 | 765 | 10 | 290 | 0 | 0 | 0 | logfile |
✔ | 7Y5G | 33619 | 2024-03-10 | 2022-06-17 | 3.85 | 4.19 | 3.81 | 4.2 | 0.002 | 0.43 | 0.0 | 0.04 | 12.74 | 0.00 | 2.084 | 2.19 | 0.00 | 0.7 | 99.3 | 0.0 | -0.05 | 0.63 | 0.72 | 1.21 | 4.1 | 0.002 | 0.51 | 0.0 | 0.04 | 15.53 | 0.00 | 2.012 | 5.62 | 2.45 | 1.0 | 99.0 | 0.0 | 1.56 | 0.67 | 0.65 | 0.75 | 0.12 | 4736 | 604 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 8GWB | 34308 | 2024-03-18 | 2022-09-16 | 2.75 | 2.95 | 2.85 | 25.0 | 0.009 | 1.07 | 1.0 | 0.05 | 17.30 | 0.01 | 1.556 | 16.84 | 2.25 | 7.5 | 92.3 | 0.2 | -2.40 | 0.29 | 0.01 | 0.23 | 25.0 | 0.004 | 0.81 | 0.0 | 0.04 | 17.94 | 0.01 | 1.944 | 21.98 | 3.71 | 9.2 | 90.7 | 0.1 | -1.83 | 1.62 | 0.36 | 0.18 | 0.12 | 21879 | 2655 | 16 | 54 | 10 | 7 | 0 | logfile |
✔ | 7YG1 | 33804 | 2024-03-11 | 2022-07-09 | 3.77 | 4.01 | 3.78 | 3.9 | 0.005 | 1.15 | 1.0 | 0.06 | 14.00 | 0.01 | 2.230 | 42.79 | 1.33 | 14.0 | 86.0 | 0.0 | -3.77 | 0.65 | 0.65 | 0.57 | 3.9 | 0.004 | 0.88 | 0.0 | 0.05 | 16.72 | 0.00 | 2.139 | 24.30 | 6.19 | 8.8 | 91.1 | 0.1 | -1.76 | 1.43 | 0.67 | 0.68 | 0.13 | 6208 | 770 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oiG | 20077 | 2024-03-15 | 2019-04-09 | 3.8 | 5.08 | — | 5.0 | 0.011 | 1.45 | 2.0 | 0.07 | 24.98 | 0.01 | 0.087 | 53.69 | 1.20 | 15.9 | 83.9 | 0.2 | -5.09 | 0.77 | 0.48 | 0.04 | 4.9 | 0.011 | 1.05 | 7.0 | 0.05 | 23.88 | 0.01 | 1.454 | 34.94 | 4.82 | 13.3 | 86.6 | 0.1 | -2.73 | 3.09 | 0.89 | 0.86 | 0.13 | 129140 | 6757 | 48 | 3522 | 116 | 0 | 0 | logfile |
✔ | 8GWE | 34310 | 2024-03-18 | 2022-09-16 | 2.66 | 3.19 | 2.77 | 16.0 | 0.009 | 0.97 | 5.0 | 0.06 | 18.80 | 0.01 | 1.065 | 13.66 | 5.00 | 8.4 | 91.2 | 0.3 | -1.93 | 0.39 | 0.09 | 0.45 | 10.1 | 0.004 | 0.93 | 1.0 | 0.05 | 18.70 | 0.00 | 1.793 | 18.44 | 4.61 | 9.2 | 90.6 | 0.2 | -2.22 | 1.48 | 0.46 | 0.25 | 0.13 | 22040 | 2668 | 15 | 56 | 10 | 1 | 0 | logfile |
✔ | 5KPX | 8282 | 2024-03-02 | 2016-07-05 | 3.9 | 5.30 | 4.08 | 3.8 | 0.008 | 1.18 | 6.0 | 0.09 | 22.84 | 0.01 | 2.087 | 29.88 | 0.58 | 13.2 | 80.2 | 6.6 | -4.56 | 0.90 | 0.77 | 0.50 | 4.0 | 0.006 | 0.80 | 1.0 | 0.04 | 23.90 | 0.01 | 1.550 | 36.46 | 4.53 | 11.5 | 87.5 | 1.0 | -2.35 | 1.08 | 0.94 | 0.90 | 0.13 | 154603 | 6623 | 59 | 4812 | 0 | 0 | 0 | logfile |
✔ | 6XSS | 22305 | 2024-03-11 | 2020-07-16 | 3.7 | 3.37 | — | 3.3 | 0.003 | 0.63 | 0.0 | 0.04 | 12.31 | 0.00 | 1.843 | 28.34 | 0.00 | 2.5 | 97.5 | 0.0 | -0.32 | 0.74 | 0.78 | 0.04 | 3.3 | 0.004 | 0.80 | 0.0 | 0.04 | 16.67 | 0.00 | 2.286 | 17.60 | 1.82 | 0.9 | 99.1 | 0.0 | 2.48 | 1.29 | 0.74 | 0.79 | 0.14 | 8048 | 1040 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TZ4 | 20588 | 2024-03-20 | 2019-08-10 | 3.2 | 3.81 | 3.16 | 3.7 | 0.010 | 0.48 | 0.0 | 0.04 | 8.47 | 0.00 | 2.212 | 3.95 | 0.00 | 1.4 | 98.6 | 0.0 | -0.10 | 0.51 | 0.57 | 0.03 | 3.5 | 0.004 | 0.93 | 0.0 | 0.04 | 17.84 | 0.00 | 2.088 | 19.64 | 2.33 | 1.2 | 98.8 | 0.0 | 2.42 | 1.69 | 0.60 | 0.84 | 0.14 | 99216 | 12852 | 72 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MF3 | 23810 | 2024-03-19 | 2021-04-08 | 3.4 | 4.14 | — | 3.2 | 0.003 | 0.68 | 0.0 | 0.04 | 15.41 | 0.00 | 1.985 | 17.36 | 0.04 | 6.5 | 93.5 | 0.0 | -0.34 | 0.90 | 0.73 | 0.19 | 3.1 | 0.002 | 0.70 | 0.0 | 0.04 | 17.51 | 0.00 | 1.949 | 17.16 | 1.41 | 6.9 | 93.1 | 0.0 | -0.86 | 1.44 | 0.91 | 0.74 | 0.14 | 22938 | 2822 | 12 | 0 | 8 | 0 | 0 | logfile |
✔ | 6QZF | 4685 | 2024-03-16 | 2019-03-11 | 3.8 | 4.25 | — | 4.1 | 0.010 | 1.06 | 0.0 | 0.06 | 10.18 | 0.01 | 2.143 | 10.27 | 0.16 | 9.8 | 90.1 | 0.0 | -4.87 | 0.67 | 0.72 | 0.54 | 4.1 | 0.004 | 0.88 | 0.0 | 0.05 | 17.09 | 0.00 | 2.074 | 26.38 | 5.09 | 8.4 | 91.6 | 0.0 | -1.63 | 1.71 | 0.66 | 0.72 | 0.14 | 71628 | 8880 | 60 | 0 | 0 | 0 | 0 | logfile |