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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8FMZ | 29301 | 2024-03-11 | 2022-12-26 | 2.59 | 2.79 | 2.62 | 2.9 | 0.004 | 0.57 | 0.0 | 0.04 | 8.86 | 0.00 | 2.264 | 6.51 | 0.21 | 1.7 | 98.3 | 0.0 | 1.58 | 0.57 | 0.77 | 3.79 | 2.8 | 0.003 | 0.55 | 0.0 | 0.04 | 14.28 | 0.00 | 2.172 | 5.87 | 2.77 | 2.2 | 97.8 | 0.0 | 1.67 | 1.08 | 0.66 | 0.86 | 3.72 | 8768 | 1126 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6X9U | 22111 | 2024-03-18 | 2020-06-03 | 3.2 | 3.30 | 3.15 | 3.3 | 0.024 | 1.69 | 0.0 | 0.10 | 11.51 | 0.01 | 2.174 | 1.19 | 0.15 | 3.3 | 96.5 | 0.3 | 0.43 | 0.78 | 0.86 | 4.11 | 3.3 | 0.002 | 0.59 | 0.0 | 0.04 | 13.09 | 0.00 | 2.149 | 5.75 | 1.27 | 3.9 | 95.9 | 0.1 | 0.28 | 0.66 | 0.76 | 0.87 | 3.23 | 19590 | 2358 | 33 | 0 | 87 | 0 | 0 | logfile |
✔ | 6LT0 | 0966 | 2024-03-17 | 2020-01-21 | 3.2 | 3.27 | — | 3.2 | 0.005 | 1.08 | 0.0 | 0.06 | 11.86 | 0.01 | 1.898 | 5.84 | 0.00 | 13.3 | 86.4 | 0.3 | -5.35 | 0.59 | 0.57 | 1.80 | 3.2 | 0.004 | 0.77 | 0.0 | 0.05 | 15.95 | 0.00 | 2.069 | 13.94 | 2.91 | 10.7 | 89.2 | 0.1 | -2.45 | 1.03 | 0.67 | 0.74 | 1.55 | 17774 | 2228 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LPN | 23480 | 2024-03-17 | 2021-02-12 | 3.61 | 4.25 | 3.76 | 4.1 | 0.004 | 0.66 | 0.0 | 0.05 | 17.48 | 0.00 | 2.103 | 3.17 | 0.22 | 6.5 | 93.5 | 0.0 | -0.80 | 0.81 | 0.82 | 2.63 | 4.1 | 0.004 | 0.63 | 0.0 | 0.04 | 13.37 | 0.00 | 2.137 | 7.74 | 2.15 | 7.4 | 92.6 | 0.0 | -0.89 | 1.12 | 0.82 | 0.84 | 2.17 | 17787 | 2076 | 42 | 0 | 105 | 0 | 0 | logfile |
✔ | 6UoT | 20832 | 2024-03-16 | 2019-10-15 | 3.3 | 3.41 | — | 3.4 | 0.009 | 1.09 | 0.0 | 0.06 | 12.07 | 0.01 | 2.166 | 4.78 | 4.35 | 5.9 | 94.1 | 0.0 | -4.68 | 0.76 | 0.83 | 2.86 | 3.4 | 0.003 | 0.63 | 0.0 | 0.04 | 16.19 | 0.00 | 2.132 | 10.93 | 2.70 | 2.5 | 97.5 | 0.0 | -0.29 | 1.98 | 0.78 | 0.87 | 1.92 | 72744 | 9072 | 48 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PE5 | 20323 | 2024-03-20 | 2019-06-20 | 3.2 | 3.26 | — | 3.2 | 0.007 | 1.07 | 2.0 | 0.06 | 10.65 | 0.02 | 2.138 | 2.86 | 0.45 | 6.4 | 93.4 | 0.2 | -3.44 | 0.71 | 0.86 | 2.95 | 3.2 | 0.005 | 0.68 | 0.0 | 0.04 | 14.82 | 0.00 | 2.157 | 5.52 | 2.37 | 5.3 | 94.7 | 0.0 | 1.09 | 1.26 | 0.73 | 0.90 | 2.01 | 27642 | 3666 | 17 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UHF | 26513 | 2024-03-18 | 2022-03-26 | 3.1 | 3.21 | — | 3.2 | 0.004 | 0.70 | 0.0 | 0.05 | 16.85 | 0.00 | 2.053 | 10.13 | 2.31 | 5.5 | 94.4 | 0.1 | -1.07 | 0.55 | 0.79 | 2.79 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 16.54 | 0.00 | 2.159 | 7.26 | 1.95 | 4.7 | 95.2 | 0.1 | -0.21 | 0.37 | 0.54 | 0.82 | 2.55 | 20379 | 2502 | 10 | 0 | 21 | 0 | 0 | logfile |
✔ | 7K7H | 22699 | 2024-03-11 | 2020-09-22 | 3.0 | 3.57 | 2.98 | 3.4 | 0.003 | 0.54 | 0.0 | 0.04 | 13.31 | 0.00 | 2.281 | 8.54 | 0.00 | 8.1 | 91.9 | 0.0 | -5.02 | 0.75 | 0.80 | 3.30 | 3.3 | 0.004 | 0.76 | 0.0 | 0.05 | 16.51 | 0.00 | 2.047 | 10.71 | 2.56 | 6.4 | 93.6 | 0.0 | -1.70 | 0.72 | 0.72 | 0.85 | 3.22 | 6323 | 816 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RD6 | 24413 | 2024-03-11 | 2021-07-09 | 3.25 | 3.44 | — | 3.4 | 0.004 | 0.79 | 0.0 | 0.05 | 14.65 | 0.00 | 2.183 | 9.73 | 0.00 | 5.3 | 94.7 | 0.0 | -1.73 | 0.56 | 0.70 | 2.23 | 3.4 | 0.003 | 0.64 | 0.0 | 0.04 | 16.27 | 0.00 | 2.095 | 13.69 | 2.29 | 5.4 | 94.6 | 0.0 | -1.15 | 0.41 | 0.57 | 0.72 | 2.09 | 7396 | 929 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7oBA | 12796 | 2024-03-23 | 2021-04-21 | 3.1 | 3.95 | 3.15 | 3.4 | 0.011 | 1.14 | 0.0 | 0.07 | 11.31 | 0.01 | 2.250 | 5.33 | 0.48 | 8.0 | 92.0 | 0.0 | -4.57 | 0.83 | 0.74 | 3.14 | 3.4 | 0.005 | 0.75 | 0.0 | 0.05 | 14.18 | 0.00 | 2.105 | 13.62 | 2.44 | 6.0 | 94.0 | 0.0 | -1.29 | 0.83 | 0.87 | 0.85 | 2.38 | 35679 | 4477 | 19 | 0 | 7 | 0 | 0 | logfile |
✔ | 7F0L | 31400 | 2024-03-19 | 2021-06-05 | 2.94 | 2.47 | — | 3.0 | 0.019 | 1.90 | 0.0 | 0.06 | 22.13 | 0.02 | 1.988 | 10.82 | 1.93 | 2.9 | 97.1 | 0.0 | 0.03 | 0.65 | 0.82 | 4.03 | 3.0 | 0.004 | 0.70 | 0.0 | 0.04 | 17.72 | 0.00 | 1.993 | 9.43 | 2.73 | 2.8 | 97.2 | 0.0 | 2.44 | 0.38 | 0.63 | 0.83 | 3.47 | 23458 | 2277 | 66 | 0 | 112 | 0 | 0 | logfile |
✔ | 6UM1 | 20815 | 2024-03-17 | 2019-10-08 | 3.46 | 3.57 | — | 3.5 | 0.014 | 1.83 | 7.0 | 0.09 | 15.71 | 0.01 | 2.014 | 9.77 | 0.84 | 6.9 | 92.9 | 0.2 | -4.82 | 0.69 | 0.70 | 2.32 | 3.5 | 0.005 | 0.80 | 0.0 | 0.05 | 16.28 | 0.00 | 2.074 | 17.33 | 4.88 | 12.5 | 87.4 | 0.1 | -3.31 | 0.60 | 0.73 | 0.77 | 2.11 | 17134 | 2208 | 4 | 0 | 8 | 0 | 0 | logfile |
✔ | 7L5W | 23191 | 2024-03-25 | 2020-12-23 | 3.34 | 3.25 | — | 3.6 | 0.006 | 1.01 | 0.0 | 0.06 | 14.60 | 0.01 | 2.172 | 11.17 | 0.00 | 6.8 | 93.2 | 0.0 | -2.74 | 0.70 | 0.77 | 2.23 | 3.6 | 0.003 | 0.62 | 0.0 | 0.04 | 16.50 | 0.00 | 2.046 | 14.55 | 1.96 | 5.9 | 94.1 | 0.0 | -0.29 | 0.54 | 0.70 | 0.78 | 1.79 | 51828 | 6636 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SQ8 | 25379 | 2024-03-16 | 2021-11-04 | 2.598 | 2.10 | — | 2.5 | 0.004 | 0.55 | 0.0 | 0.04 | 13.32 | 0.00 | 2.199 | 3.68 | 0.00 | 3.3 | 96.7 | 0.0 | 1.93 | 0.64 | 0.86 | 4.26 | 2.4 | 0.005 | 0.62 | 0.0 | 0.04 | 15.19 | 0.00 | 2.166 | 4.73 | 1.27 | 3.5 | 96.5 | 0.0 | 2.11 | 0.31 | 0.64 | 0.88 | 4.38 | 15117 | 1852 | 13 | 0 | 9 | 8 | 0 | logfile |
✔ | 7oAN | 12777 | 2024-03-20 | 2021-04-19 | 3.0 | 3.72 | — | 3.3 | 0.011 | 1.13 | 0.0 | 0.08 | 13.39 | 0.00 | 2.066 | 8.15 | 1.35 | 4.0 | 95.8 | 0.2 | -0.73 | 0.88 | 0.87 | 2.70 | 3.3 | 0.004 | 0.61 | 0.0 | 0.05 | 13.84 | 0.00 | 2.134 | 8.66 | 1.22 | 4.2 | 95.8 | 0.0 | 0.34 | 1.21 | 0.87 | 0.87 | 2.51 | 28203 | 3510 | 24 | 0 | 66 | 0 | 0 | logfile |
✔ | 7M6S | 23706 | 2024-03-16 | 2021-03-26 | 3.61 | 4.62 | 3.61 | 3.9 | 0.008 | 1.49 | 0.0 | 0.09 | 12.30 | 0.01 | 2.269 | 6.38 | 0.00 | 3.1 | 96.9 | 0.0 | 1.92 | 0.87 | 0.78 | 1.08 | 3.9 | 0.004 | 0.83 | 0.0 | 0.05 | 14.85 | 0.00 | 2.206 | 16.72 | 1.12 | 3.3 | 96.7 | 0.0 | 0.45 | 1.41 | 0.89 | 0.83 | 1.03 | 14625 | 1790 | 10 | 0 | 5 | 0 | 0 | logfile |
✔ | 7K79 | 22697 | 2024-03-16 | 2020-09-22 | 4.0 | 4.46 | — | 4.1 | 0.009 | 1.81 | 2.0 | 0.08 | 17.45 | 0.01 | 2.197 | 11.21 | 0.13 | 9.6 | 90.4 | 0.0 | -3.78 | 0.79 | 0.74 | — | 4.1 | 0.003 | 0.73 | 0.0 | 0.04 | 18.00 | 0.00 | 2.138 | 17.35 | 3.64 | 7.0 | 93.0 | 0.0 | -1.11 | 2.18 | 0.80 | 0.74 | — | 13272 | 1601 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7E7o | 31001 | 2024-03-16 | 2021-02-26 | 3.4 | 3.48 | — | 3.4 | 0.008 | 1.11 | 0.0 | 0.05 | 19.15 | 0.01 | 2.006 | 10.56 | 2.13 | 12.0 | 87.4 | 0.7 | -3.57 | 0.70 | 0.84 | 2.63 | 3.4 | 0.004 | 0.80 | 0.0 | 0.05 | 16.95 | 0.00 | 2.123 | 6.45 | 2.26 | 10.6 | 89.3 | 0.1 | -1.87 | 0.40 | 0.72 | 0.87 | 2.10 | 15816 | 2003 | 4 | 0 | 21 | 0 | 0 | logfile |
✔ | 6ACJ | 9593 | 2024-03-21 | 2018-07-26 | 4.2 | 4.37 | — | 4.2 | 0.010 | 1.33 | 2.0 | 0.07 | 11.28 | 0.01 | 1.731 | 12.04 | 0.61 | 16.8 | 82.7 | 0.6 | -4.76 | 0.74 | 0.71 | — | 4.2 | 0.004 | 0.79 | 0.0 | 0.05 | 12.46 | 0.00 | 2.036 | 20.60 | 0.00 | 13.9 | 85.9 | 0.2 | -2.80 | 1.54 | 0.75 | 0.72 | — | 29715 | 3784 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UTH | 26770 | 2024-03-23 | 2022-04-26 | 3.9 | 4.02 | — | 4.0 | 0.006 | 0.98 | 1.0 | 0.05 | 18.37 | 0.01 | 2.095 | 4.45 | 0.72 | 5.3 | 94.5 | 0.2 | -0.70 | 0.46 | 0.67 | 0.95 | 4.0 | 0.003 | 0.57 | 1.0 | 0.03 | 18.80 | 0.00 | 1.937 | 12.11 | 4.17 | 5.7 | 94.1 | 0.1 | 0.66 | 1.73 | 0.51 | 0.71 | 0.59 | 36590 | 2242 | 2 | 0 | 0 | 0 | 18572 | logfile |