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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6o9J | 0661 | 2022-05-18 | 2019-03-14 | 3.9 | 3.92 | — | 3.9 | 0.006 | 1.25 | 25.0 | 0.10 | 17.39 | 0.01 | 0.154 | 55.38 | 23.17 | 26.6 | 58.7 | 14.7 | -7.10 | 0.74 | 0.66 | 0.16 | 3.9 | 0.011 | 1.09 | 10.0 | 0.05 | 17.02 | 0.01 | 1.293 | 32.80 | 0.58 | 23.4 | 73.7 | 3.0 | -4.89 | 1.14 | 0.79 | 0.75 | 0.36 | 142682 | 5731 | 53 | 4564 | 0 | 0 | 0 | logfile |
✔ | 3J2P | 5499 | 2022-05-13 | 2012-11-30 | 3.6 | 3.28 | — | 3.4 | 0.009 | 1.92 | 0.0 | 0.12 | 17.49 | 0.02 | 2.155 | 110.70 | 20.13 | 29.7 | 46.3 | 24.1 | -7.75 | 0.42 | 0.79 | 1.08 | 3.3 | 0.004 | 0.95 | 0.0 | 0.05 | 17.92 | 0.01 | 1.899 | 74.82 | 1.47 | 22.8 | 73.8 | 3.4 | -4.64 | 0.91 | 0.39 | 0.73 | 1.07 | 9890 | 1134 | 6 | 0 | 6 | 0 | 1086 | logfile |
✔ | 6TNG | 10532 | 2022-05-12 | 2019-12-07 | 4.1 | 4.25 | 3.91 | 4.0 | 0.008 | 1.39 | 0.0 | 0.00 | 8.74 | 0.01 | 2.183 | 11.35 | 0.00 | 18.9 | 80.2 | 0.8 | -5.16 | 0.75 | 0.70 | — | 4.0 | 0.006 | 1.02 | 0.0 | 0.00 | 7.42 | 0.01 | 2.133 | 21.25 | 0.00 | 25.4 | 74.3 | 0.3 | -3.93 | 0.35 | 0.76 | 0.72 | — | 8240 | 2060 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6DJP | 7939 | 2022-05-12 | 2018-05-25 | 4.8 | 5.02 | — | 4.8 | 0.011 | 2.00 | 0.0 | 0.08 | 5.34 | 0.01 | 2.368 | 0.45 | 0.00 | 4.6 | 95.4 | 0.0 | -0.74 | 0.76 | 0.65 | — | 4.8 | 0.009 | 1.27 | 0.0 | 0.05 | 9.47 | 0.01 | 2.140 | 24.14 | 0.00 | 24.7 | 74.7 | 0.6 | -4.67 | 1.25 | 0.82 | 0.77 | — | 7307 | 1393 | 8 | 0 | 23 | 0 | 0 | logfile |
✔ | 5YYS | 6859 | 2022-05-15 | 2017-12-11 | 4.2 | 4.57 | — | 4.1 | 0.016 | 2.26 | 0.0 | 0.10 | 15.30 | 0.01 | 2.201 | 22.76 | 2.34 | 27.3 | 70.1 | 2.6 | -5.98 | 0.85 | 0.71 | — | 4.1 | 0.004 | 1.31 | 0.0 | 0.06 | 12.64 | 0.01 | 1.988 | 34.20 | 0.00 | 24.3 | 75.2 | 0.5 | -4.07 | 1.67 | 0.88 | 0.76 | — | 24044 | 3244 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7C1D | 30269 | 2022-05-12 | 2020-05-03 | 3.8 | 4.18 | — | 4.3 | 0.004 | 0.71 | 0.0 | 0.05 | 13.99 | 0.00 | 2.367 | 18.87 | 0.00 | 20.4 | 79.6 | 0.0 | -6.46 | 0.34 | 0.74 | 3.47 | 6.5 | 0.004 | 0.69 | 0.0 | 0.05 | 14.90 | 0.00 | 2.239 | 18.63 | 0.52 | 24.5 | 75.5 | 0.0 | -4.57 | 2.82 | 0.39 | 0.75 | 2.42 | 2034 | 306 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6B19 | 7031 | 2022-05-12 | 2017-09-18 | 4.5 | 4.61 | — | 4.4 | 0.023 | 1.38 | 0.0 | 0.05 | 6.45 | 0.01 | 2.201 | 16.18 | 0.00 | 19.4 | 80.5 | 0.1 | -5.73 | 0.74 | 0.63 | — | 4.4 | 0.003 | 0.87 | 0.0 | 0.04 | 13.09 | 0.00 | 1.943 | 28.42 | 0.00 | 24.5 | 75.5 | 0.0 | -5.38 | 1.33 | 0.77 | 0.65 | — | 5699 | 907 | 4 | 38 | 0 | 0 | 409 | logfile |
✔ | 3LoS | 5137 | 2022-05-13 | 2010-02-04 | 4.3 | 2.98 | — | 3.0 | 0.008 | 2.44 | 224.0 | 0.19 | 19.87 | 0.01 | 2.259 | 88.10 | 23.89 | 17.4 | 68.9 | 13.8 | -6.57 | 0.57 | 0.49 | — | 3.2 | 0.007 | 1.33 | 0.0 | 0.05 | 16.09 | 0.01 | 1.037 | 31.44 | 0.00 | 20.2 | 75.6 | 4.2 | -4.47 | 1.32 | 0.62 | 0.54 | — | 63712 | 8512 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 5A9Z | 6396 | 2022-05-22 | 2015-07-23 | 4.7 | 4.83 | — | 4.7 | 0.013 | 1.89 | 26.0 | 0.14 | 23.31 | 0.03 | 0.000 | 199.55 | 29.15 | 25.1 | 49.6 | 25.2 | -7.73 | 0.81 | 0.65 | — | 4.7 | 0.007 | 1.03 | 0.0 | 0.05 | 19.42 | 0.01 | 0.000 | 40.53 | 0.19 | 21.0 | 76.7 | 2.4 | -4.44 | 2.93 | 0.87 | 0.82 | — | 150547 | 6671 | 58 | 4527 | 131 | 0 | 0 | logfile |
✔ | 7DWV | 30887 | 2022-05-12 | 2021-01-18 | 3.07 | 2.95 | — | 3.6 | 0.007 | 0.80 | 0.0 | 0.06 | 14.69 | 0.00 | 2.258 | 17.63 | 0.00 | 26.8 | 73.2 | 0.0 | -7.45 | 0.41 | 0.75 | 4.09 | 4.1 | 0.004 | 0.73 | 0.0 | 0.05 | 17.17 | 0.00 | 2.189 | 19.08 | 0.00 | 23.2 | 76.8 | 0.0 | -5.96 | 1.50 | 0.41 | 0.75 | 2.79 | 2064 | 258 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M62 | 23687 | 2022-05-12 | 2021-03-25 | 3.9 | 3.91 | — | 4.3 | 0.007 | 1.13 | 0.0 | 0.07 | 14.83 | 0.00 | 2.321 | 32.83 | 0.00 | 23.3 | 76.7 | 0.0 | -4.97 | 0.55 | 0.62 | 2.27 | 4.3 | 0.003 | 0.99 | 0.0 | 0.05 | 15.87 | 0.00 | 2.105 | 21.17 | 0.00 | 22.7 | 77.3 | 0.0 | -4.56 | 2.11 | 0.57 | 0.65 | 3.17 | 2380 | 320 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 6VE2 | 21152 | 2022-05-16 | 2019-12-28 | 4.3 | 4.80 | 4.34 | 4.2 | 0.006 | 1.23 | 0.0 | 0.07 | 5.37 | 0.01 | 2.173 | 16.97 | 0.00 | 4.7 | 94.9 | 0.5 | -0.93 | 0.83 | 0.70 | — | 4.2 | 0.007 | 1.24 | 0.0 | 0.05 | 10.04 | 0.01 | 2.049 | 33.59 | 0.00 | 21.9 | 77.6 | 0.6 | -4.75 | 1.35 | 0.89 | 0.76 | — | 30198 | 6153 | 21 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RTB | 4996 | 2022-05-12 | 2019-05-22 | 3.46 | 3.57 | — | 3.5 | 0.009 | 1.23 | 0.0 | 0.07 | 15.08 | 0.01 | 2.122 | 6.27 | 2.61 | 18.9 | 80.9 | 0.2 | -4.64 | 0.62 | 0.79 | 4.22 | 3.5 | 0.006 | 0.85 | 0.0 | 0.05 | 16.16 | 0.00 | 2.105 | 17.65 | 0.65 | 22.1 | 77.9 | 0.0 | -4.34 | 0.89 | 0.63 | 0.81 | 4.18 | 4681 | 699 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XTB | 10618 | 2022-05-12 | 2020-01-15 | 4.3 | 4.32 | — | 3.9 | 0.006 | 1.17 | 0.0 | 0.07 | 8.68 | 0.00 | 2.369 | 3.00 | 0.00 | 15.6 | 84.4 | 0.0 | -4.66 | 0.32 | 0.43 | — | 4.1 | 0.004 | 1.06 | 0.0 | 0.05 | 7.90 | 0.00 | 2.205 | 9.62 | 0.00 | 22.1 | 77.9 | 0.0 | -5.53 | 2.43 | 0.34 | 0.64 | — | 1161 | 235 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZYD | 11557 | 2022-05-16 | 2020-07-31 | 3.0 | 3.62 | 2.76 | 3.4 | 0.017 | 1.20 | 0.0 | 0.12 | 17.41 | 0.01 | 2.269 | 4.88 | 0.00 | 5.1 | 94.9 | 0.0 | -3.12 | 0.75 | 0.77 | 4.36 | 3.4 | 0.059 | 2.56 | 0.0 | 0.17 | 18.86 | 0.02 | 1.730 | 57.41 | 12.94 | 21.7 | 78.3 | 0.0 | -6.10 | 1.47 | 0.79 | 0.85 | 3.23 | 31423 | 1792 | 14 | 0 | 476 | 0 | 14490 | logfile |
✔ | 7NNH | 12477 | 2022-05-12 | 2021-02-24 | 4.0 | 5.15 | — | 4.2 | 0.004 | 1.27 | 0.0 | 0.05 | 15.82 | 0.01 | 2.066 | 35.16 | 0.34 | 23.0 | 76.5 | 0.5 | -3.61 | 0.74 | 0.80 | — | 4.2 | 0.003 | 1.12 | 0.0 | 0.05 | 16.95 | 0.00 | 2.060 | 28.00 | 0.34 | 21.4 | 78.4 | 0.2 | -2.67 | 0.75 | 0.75 | 0.80 | — | 5299 | 637 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NYM | 0546 | 2022-05-14 | 2019-02-11 | 3.6 | 4.42 | — | 4.1 | 0.005 | 0.94 | 0.0 | 0.06 | 10.43 | 0.00 | 2.260 | 8.29 | 0.32 | 12.6 | 87.4 | 0.0 | -5.10 | 0.87 | 0.78 | 2.54 | 4.2 | 0.008 | 0.89 | 0.0 | 0.05 | 13.01 | 0.00 | 2.115 | 20.83 | 0.41 | 21.5 | 78.5 | 0.0 | -4.64 | 1.21 | 0.87 | 0.79 | 2.54 | 68664 | 9000 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6H3J | 0134 | 2022-05-14 | 2018-07-18 | 3.7 | 3.83 | — | 3.7 | 0.007 | 0.87 | 0.0 | 0.05 | 10.17 | 0.00 | 2.025 | 43.43 | 0.05 | 23.8 | 76.2 | 0.0 | -6.63 | 0.77 | 0.85 | 3.89 | 3.7 | 0.005 | 0.65 | 0.0 | 0.04 | 13.39 | 0.00 | 1.860 | 56.31 | 0.32 | 21.3 | 78.7 | 0.0 | -4.95 | 2.68 | 0.78 | 0.86 | 2.86 | 20301 | 2511 | 3 | 0 | 0 | 0 | 212 | logfile |
✔ | 5ZLU | 6934 | 2022-05-22 | 2018-03-29 | 3.6 | 3.66 | — | 3.6 | 0.008 | 1.26 | 2.0 | 0.07 | 18.68 | 0.01 | 0.401 | 13.59 | 2.52 | 18.9 | 79.1 | 1.9 | -5.90 | 0.78 | 0.77 | 1.74 | 3.6 | 0.007 | 1.01 | 2.0 | 0.05 | 18.91 | 0.01 | 1.656 | 14.56 | 0.23 | 20.5 | 78.7 | 0.9 | -4.73 | 1.21 | 0.78 | 0.79 | 0.91 | 150313 | 6529 | 60 | 4596 | 4 | 0 | 0 | logfile |
✔ | 6H3i | 0133 | 2022-05-14 | 2018-07-18 | 3.5 | 3.59 | — | 3.5 | 0.009 | 0.92 | 0.0 | 0.05 | 10.08 | 0.01 | 2.012 | 39.59 | 0.40 | 21.4 | 78.4 | 0.2 | -5.64 | 0.78 | 0.86 | 4.47 | 3.5 | 0.010 | 0.93 | 1.0 | 0.04 | 13.26 | 0.00 | 2.010 | 52.82 | 0.00 | 21.1 | 78.8 | 0.1 | -4.42 | 2.52 | 0.78 | 0.87 | 3.45 | 20599 | 2597 | 3 | 0 | 0 | 0 | 53 | logfile |