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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6LN7 | 0926 | 2022-12-11 | 2019-12-28 | 2.8 | 2.90 | 2.71 | 2.9 | 0.005 | 0.65 | 0.0 | 0.04 | 11.73 | 0.00 | 2.101 | 5.77 | 0.00 | 2.3 | 97.7 | 0.0 | -3.93 | 0.70 | 0.85 | 3.69 | 2.9 | 0.002 | 0.56 | 0.0 | 0.04 | 16.48 | 0.00 | 2.243 | 6.34 | 1.39 | 2.0 | 98.0 | 0.0 | 0.79 | 0.48 | 0.69 | 0.86 | 2.71 | 7840 | 1011 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 6LXE | 30006 | 2022-12-12 | 2020-02-10 | 4.2 | 4.23 | — | 4.0 | 0.002 | 0.59 | 0.0 | 0.04 | 15.29 | 0.00 | 2.030 | 17.23 | 0.14 | 8.7 | 91.3 | 0.0 | -3.22 | 0.85 | 0.70 | — | 3.9 | 0.004 | 0.82 | 0.0 | 0.04 | 14.71 | 0.00 | 2.156 | 27.68 | 0.14 | 10.7 | 89.3 | 0.0 | -2.32 | 1.70 | 0.85 | 0.72 | — | 6519 | 813 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 6SKM | 10228 | 2022-12-12 | 2019-08-16 | 4.9 | 5.09 | 4.66 | 4.9 | 0.004 | 0.64 | 0.0 | 0.04 | 9.23 | 0.00 | 1.449 | 9.87 | 0.18 | 1.4 | 98.6 | 0.0 | -1.03 | 0.68 | 0.74 | — | 4.9 | 0.004 | 0.79 | 0.0 | 0.05 | 12.82 | 0.01 | 2.123 | 22.27 | 0.18 | 3.4 | 96.6 | 0.0 | 0.10 | 2.75 | 0.70 | 0.80 | — | 10336 | 1320 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6W64 | 21552 | 2022-12-12 | 2020-03-16 | 3.9 | 4.06 | — | 4.0 | 0.003 | 0.58 | 0.0 | 0.04 | 13.75 | 0.00 | 2.196 | 9.73 | 1.29 | 7.0 | 92.9 | 0.1 | 0.30 | 0.74 | 0.70 | 0.86 | 4.0 | 0.003 | 0.72 | 0.0 | 0.04 | 17.84 | 0.00 | 2.090 | 19.21 | 0.65 | 8.6 | 91.4 | 0.0 | -0.56 | 0.93 | 0.75 | 0.72 | 1.16 | 8505 | 928 | 3 | 56 | 0 | 0 | 0 | logfile |
✔ | 6LXD | 30005 | 2022-12-13 | 2020-02-10 | 3.9 | 3.67 | — | 3.5 | 0.002 | 0.55 | 0.0 | 0.04 | 13.46 | 0.00 | 2.239 | 15.47 | 0.70 | 9.3 | 90.7 | 0.0 | -3.27 | 0.87 | 0.79 | 0.87 | 3.5 | 0.003 | 0.76 | 0.0 | 0.04 | 15.19 | 0.00 | 2.137 | 17.74 | 0.12 | 9.0 | 91.0 | 0.0 | -1.58 | 0.67 | 0.88 | 0.79 | 0.94 | 9435 | 963 | 5 | 72 | 2 | 0 | 0 | logfile |
✔ | 6VRB | 21366 | 2022-12-12 | 2020-02-07 | 3.0 | 3.08 | — | 3.1 | 0.009 | 1.20 | 2.0 | 0.08 | 14.70 | 0.01 | 1.877 | 16.14 | 3.12 | 7.9 | 92.1 | 0.0 | -4.13 | 0.74 | 0.77 | 2.24 | 3.1 | 0.002 | 0.60 | 0.0 | 0.04 | 18.04 | 0.00 | 2.211 | 5.64 | 2.36 | 5.4 | 94.6 | 0.0 | 0.45 | 1.79 | 0.79 | 0.86 | 2.01 | 11581 | 1260 | 3 | 52 | 0 | 0 | 0 | logfile |
✔ | 6M67 | 30115 | 2022-12-13 | 2020-03-13 | 3.6 | 3.14 | — | 4.0 | 0.006 | 1.14 | 0.0 | 0.06 | 14.95 | 0.01 | 2.247 | 6.79 | 0.00 | 10.3 | 89.7 | 0.0 | -4.86 | 0.54 | 0.64 | 1.39 | 3.9 | 0.003 | 0.84 | 0.0 | 0.05 | 17.09 | 0.00 | 2.035 | 17.10 | 0.59 | 9.7 | 90.3 | 0.0 | -1.38 | 0.82 | 0.54 | 0.64 | 1.33 | 14938 | 1855 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6SLQ | 10239 | 2022-12-12 | 2019-08-20 | 4.4 | 4.54 | 4.34 | 4.5 | 0.012 | 0.81 | 0.0 | 0.04 | 9.23 | 0.01 | 1.359 | 11.91 | 0.18 | 1.1 | 98.9 | 0.0 | -1.02 | 0.63 | 0.72 | — | 4.5 | 0.004 | 0.80 | 0.0 | 0.05 | 13.10 | 0.01 | 2.099 | 16.65 | 0.00 | 4.1 | 95.9 | 0.0 | -0.14 | 1.72 | 0.65 | 0.77 | — | 10336 | 1320 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7A91 | 11681 | 2022-12-11 | 2020-09-01 | 3.6 | 3.74 | 3.57 | 3.7 | 0.006 | 0.77 | 0.0 | 0.05 | 15.20 | 0.01 | 2.194 | 3.55 | 0.81 | 4.9 | 95.1 | 0.0 | -2.81 | 0.75 | 0.82 | 2.55 | 3.7 | 0.002 | 0.56 | 0.0 | 0.04 | 16.32 | 0.00 | 2.241 | 6.36 | 0.40 | 2.8 | 97.2 | 0.0 | -0.56 | 2.46 | 0.75 | 0.81 | 2.01 | 6915 | 839 | 5 | 0 | 10 | 0 | 0 | logfile |
✔ | 6V9X | 21129 | 2022-12-14 | 2019-12-16 | 3.3 | 3.52 | 3.34 | 3.5 | 0.005 | 0.90 | 0.0 | 0.05 | 15.21 | 0.01 | 2.280 | 3.65 | 1.24 | 3.9 | 96.1 | 0.0 | -5.84 | 0.74 | 0.80 | 1.79 | 3.5 | 0.004 | 0.65 | 0.0 | 0.04 | 16.21 | 0.00 | 2.124 | 9.83 | 0.52 | 4.2 | 95.8 | 0.0 | 0.67 | 1.36 | 0.75 | 0.83 | 2.05 | 18084 | 2284 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WUH | 21913 | 2022-12-11 | 2020-05-04 | 3.4 | 3.72 | — | 3.6 | 0.003 | 0.67 | 0.0 | 0.04 | 14.69 | 0.01 | 2.129 | 9.08 | 5.42 | 12.5 | 87.5 | 0.0 | -5.07 | 0.67 | 0.80 | 2.01 | 3.7 | 0.004 | 0.75 | 0.0 | 0.04 | 15.53 | 0.01 | 2.149 | 9.60 | 0.50 | 11.9 | 88.1 | 0.0 | -2.51 | 0.52 | 0.67 | 0.81 | 1.90 | 7790 | 1037 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VK3 | 21224 | 2022-12-11 | 2020-01-18 | 3.7 | 3.81 | — | 3.8 | 0.006 | 0.93 | 0.0 | 0.06 | 14.84 | 0.01 | 2.013 | 12.45 | 0.00 | 5.1 | 94.8 | 0.1 | -2.61 | 0.68 | 0.80 | 1.94 | 3.8 | 0.003 | 0.61 | 0.0 | 0.04 | 16.83 | 0.00 | 2.209 | 8.22 | 0.24 | 5.2 | 94.8 | 0.0 | 0.27 | 1.63 | 0.67 | 0.79 | 1.62 | 7784 | 954 | 2 | 0 | 7 | 0 | 0 | logfile |
✔ | 6VJY | 21220 | 2022-12-11 | 2020-01-18 | 4.3 | 4.47 | — | 4.3 | 0.003 | 0.64 | 0.0 | 0.04 | 14.40 | 0.00 | 2.223 | 12.44 | 0.13 | 4.1 | 95.9 | 0.0 | -1.62 | 0.70 | 0.81 | — | 4.3 | 0.004 | 0.72 | 0.0 | 0.04 | 14.35 | 0.00 | 2.135 | 11.61 | 0.00 | 4.9 | 95.1 | 0.0 | 1.69 | 0.86 | 0.70 | 0.81 | — | 7266 | 883 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UA5 | 20706 | 2022-12-14 | 2019-09-10 | 3.79 | 3.78 | 3.59 | 3.8 | 0.014 | 1.50 | 8.0 | 0.07 | 14.10 | 0.01 | 2.192 | 9.01 | 8.52 | 4.9 | 95.1 | 0.0 | -4.43 | 0.62 | 0.81 | 3.37 | 3.8 | 0.004 | 0.75 | 0.0 | 0.05 | 16.48 | 0.00 | 2.131 | 20.04 | 1.22 | 6.1 | 93.9 | 0.0 | -1.46 | 1.61 | 0.62 | 0.81 | 1.76 | 23080 | 3008 | 16 | 0 | 16 | 0 | 0 | logfile |
✔ | 6WUJ | 21914 | 2022-12-11 | 2020-05-04 | 3.7 | 3.85 | — | 3.8 | 0.007 | 0.93 | 0.0 | 0.05 | 13.20 | 0.01 | 2.059 | 10.18 | 0.15 | 16.1 | 83.8 | 0.1 | -5.66 | 0.71 | 0.82 | 3.23 | 3.8 | 0.003 | 0.71 | 0.0 | 0.04 | 15.11 | 0.00 | 2.138 | 9.28 | 0.15 | 10.0 | 90.0 | 0.0 | -2.05 | 0.55 | 0.71 | 0.82 | 2.56 | 6699 | 884 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6W17 | 21502 | 2022-12-15 | 2020-03-03 | 3.9 | 3.99 | 3.93 | 3.9 | 0.003 | 0.59 | 0.0 | 0.04 | 12.66 | 0.00 | 1.894 | 5.91 | 0.00 | 4.9 | 95.1 | 0.0 | -3.15 | 0.87 | 0.82 | 1.39 | 3.9 | 0.005 | 0.76 | 0.0 | 0.04 | 15.33 | 0.00 | 1.855 | 12.80 | 0.74 | 6.7 | 93.3 | 0.0 | -0.88 | 0.67 | 0.89 | 0.86 | 1.78 | 27396 | 3518 | 23 | 0 | 12 | 0 | 0 | logfile |
✔ | 6XYE | 10649 | 2022-12-12 | 2020-01-30 | 4.3 | 4.37 | 4.28 | 4.3 | 0.010 | 1.29 | 0.0 | 0.09 | 10.03 | 0.01 | 2.315 | 11.42 | 0.00 | 4.7 | 95.3 | 0.0 | -3.09 | 0.71 | 0.69 | — | 4.3 | 0.003 | 0.75 | 0.0 | 0.05 | 12.45 | 0.00 | 2.159 | 14.59 | 0.00 | 8.0 | 92.0 | 0.0 | -1.37 | 1.39 | 0.72 | 0.69 | — | 9834 | 1293 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6X5A | 22047 | 2022-12-13 | 2020-05-25 | 4.36 | 4.99 | — | 4.3 | 0.007 | 0.89 | 0.0 | 0.05 | 27.01 | 0.01 | 2.107 | 17.81 | 1.66 | 6.2 | 93.7 | 0.2 | -1.94 | 0.90 | 0.80 | — | 4.3 | 0.005 | 0.70 | 0.0 | 0.04 | 26.98 | 0.00 | 2.060 | 16.33 | 0.00 | 6.2 | 93.8 | 0.0 | 0.66 | 0.89 | 0.91 | 0.83 | — | 14963 | 1123 | 11 | 290 | 1 | 0 | 0 | logfile |
✔ | 6U8S | 20691 | 2022-12-14 | 2019-09-05 | 3.14 | 3.91 | 3.03 | 3.7 | 0.012 | 1.36 | 0.0 | 0.07 | 14.27 | 0.01 | 2.257 | 9.77 | 9.06 | 5.1 | 94.9 | 0.0 | -4.07 | 0.60 | 0.79 | 2.61 | 3.7 | 0.004 | 0.83 | 0.0 | 0.05 | 15.57 | 0.00 | 2.154 | 18.24 | 0.63 | 5.1 | 94.9 | 0.0 | -1.95 | 0.69 | 0.59 | 0.78 | 2.52 | 23080 | 3008 | 16 | 0 | 16 | 0 | 0 | logfile |
✔ | 6U5N | 20650 | 2022-12-13 | 2019-08-28 | 3.2 | 3.32 | — | 3.3 | 0.006 | 0.76 | 0.0 | 0.05 | 14.13 | 0.01 | 1.907 | 2.80 | 0.15 | 4.8 | 95.2 | 0.0 | -3.09 | 0.72 | 0.84 | 2.62 | 3.3 | 0.004 | 0.52 | 0.0 | 0.05 | 15.88 | 0.00 | 2.097 | 5.80 | 0.44 | 3.1 | 96.9 | 0.0 | 0.71 | 0.52 | 0.67 | 0.84 | 2.32 | 13262 | 1776 | 24 | 0 | 24 | 8 | 0 | logfile |