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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7RHZ | 24472 | 2023-11-15 | 2021-07-19 | 4.48 | 7.32 | 5.01 | 7.0 | 0.020 | 1.62 | 32.0 | 0.18 | 21.07 | 0.01 | 2.015 | 9.11 | 0.59 | 3.5 | 96.5 | 0.0 | -1.60 | 0.85 | 0.71 | — | 7.0 | 0.004 | 0.68 | 0.0 | 0.04 | 21.60 | 0.00 | 2.021 | 16.90 | 0.00 | 5.4 | 94.6 | 0.0 | -0.26 | 2.89 | 0.88 | 0.77 | — | 12550 | 615 | 4 | 88 | 0 | 0 | 5875 | logfile |
✔ | 6HZ9 | 0315 | 2023-11-16 | 2018-10-22 | 4.8 | 4.94 | 4.76 | 4.8 | 0.009 | 1.01 | 0.0 | 0.05 | 14.59 | 0.01 | 1.957 | 3.22 | 0.51 | 2.9 | 97.1 | 0.0 | -0.60 | 0.83 | 0.76 | — | 4.8 | 0.004 | 0.62 | 0.0 | 0.04 | 14.32 | 0.00 | 1.779 | 15.48 | 0.00 | 5.2 | 94.8 | 0.0 | -0.16 | 2.82 | 0.84 | 0.78 | — | 67582 | 4120 | 26 | 6 | 12 | 0 | 33368 | logfile |
✔ | 8EXP | 28658 | 2023-11-14 | 2022-10-25 | 4.2 | 4.47 | 4.29 | 4.6 | 0.019 | 1.74 | 0.0 | 0.10 | 10.69 | 0.01 | 2.031 | 5.52 | 0.60 | 3.4 | 96.4 | 0.2 | -0.04 | 0.53 | 0.43 | — | 4.6 | 0.003 | 0.70 | 0.0 | 0.04 | 13.28 | 0.00 | 2.061 | 14.99 | 0.00 | 4.7 | 95.3 | 0.0 | 0.30 | 1.14 | 0.64 | 0.70 | — | 9024 | 1078 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 8EXQ | 28659 | 2023-11-14 | 2022-10-25 | 4.9 | 5.40 | 5.55 | 6.0 | 0.020 | 1.74 | 0.0 | 0.10 | 10.28 | 0.01 | 2.002 | 1.81 | 0.00 | 2.5 | 97.3 | 0.2 | 0.34 | 0.52 | 0.45 | — | 6.0 | 0.003 | 0.74 | 0.0 | 0.04 | 12.89 | 0.00 | 2.068 | 17.98 | 0.00 | 5.3 | 94.5 | 0.2 | -0.50 | 2.54 | 0.58 | 0.63 | — | 9304 | 1108 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7WTH | 32786 | 2023-11-13 | 2022-02-04 | 4.3 | 3.63 | — | 4.0 | 0.004 | 0.78 | 0.0 | 0.05 | 12.97 | 0.01 | 2.169 | 9.08 | 0.85 | 8.0 | 92.0 | 0.0 | -2.03 | 0.69 | 0.70 | — | 3.8 | 0.004 | 0.77 | 0.0 | 0.05 | 13.51 | 0.00 | 2.154 | 11.58 | 0.00 | 10.6 | 89.2 | 0.2 | -2.44 | 1.20 | 0.69 | 0.72 | — | 3257 | 421 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8AP1 | 15556 | 2023-11-15 | 2022-08-09 | 3.47 | 3.19 | 3.47 | 3.4 | 0.005 | 0.76 | 0.0 | 0.05 | 18.28 | 0.00 | 2.023 | 5.94 | 0.27 | 3.9 | 96.1 | 0.0 | 0.17 | 0.66 | 0.82 | 3.13 | 3.4 | 0.002 | 0.52 | 0.0 | 0.04 | 19.18 | 0.00 | 2.059 | 6.03 | 0.00 | 2.4 | 97.6 | 0.0 | 1.12 | 0.32 | 0.66 | 0.84 | 2.66 | 11221 | 1257 | 6 | 54 | 3 | 0 | 0 | logfile |
✔ | 6H3L | 0135 | 2023-11-20 | 2018-07-19 | 4.2 | 4.88 | — | 3.9 | 0.015 | 1.70 | 0.0 | 0.08 | 11.55 | 0.01 | 2.124 | 5.25 | 0.06 | 7.7 | 91.4 | 0.9 | -1.43 | 0.92 | 0.69 | — | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 13.27 | 0.00 | 1.891 | 16.48 | 0.00 | 6.8 | 93.0 | 0.2 | -1.95 | 1.34 | 0.91 | 0.76 | — | 29319 | 1881 | 3 | 0 | 0 | 0 | 14388 | logfile |
✔ | 6DVZ | 8921 | 2023-11-18 | 2018-06-25 | 4.24 | 4.48 | — | 4.4 | 0.008 | 1.27 | 0.0 | 0.06 | 12.54 | 0.01 | 2.265 | 5.74 | 0.18 | 16.6 | 82.6 | 0.8 | -5.86 | 0.70 | 0.80 | — | 4.4 | 0.003 | 0.81 | 0.0 | 0.04 | 13.96 | 0.00 | 1.621 | 12.77 | 0.00 | 13.5 | 86.1 | 0.4 | -2.24 | 0.88 | 0.70 | 0.80 | — | 20976 | 2572 | 8 | 0 | 12 | 0 | 0 | logfile |
✔ | 7Si3 | 25137 | 2023-11-15 | 2021-10-12 | 3.19 | 3.21 | — | 3.2 | 0.003 | 1.19 | 0.0 | 0.04 | 13.00 | 0.00 | 2.038 | 2.15 | 0.00 | 1.5 | 98.5 | 0.0 | 3.72 | 0.48 | 0.77 | 1.74 | 3.1 | 0.003 | 0.85 | 0.0 | 0.04 | 14.48 | 0.00 | 1.919 | 4.15 | 0.00 | 2.7 | 97.3 | 0.0 | 2.05 | 0.93 | 0.51 | 0.82 | 2.32 | 13500 | 873 | 1 | 0 | 2 | 0 | 6901 | logfile |
✔ | 5KGF | 8246 | 2023-11-16 | 2016-06-13 | 4.54 | 4.64 | — | 4.5 | 0.009 | 1.37 | 2.0 | 0.07 | 27.90 | 0.01 | 1.243 | 27.10 | 0.12 | 6.5 | 93.1 | 0.4 | -4.86 | 0.79 | 0.76 | — | 4.5 | 0.005 | 0.73 | 0.0 | 0.04 | 26.58 | 0.01 | 2.134 | 18.68 | 0.00 | 6.4 | 93.3 | 0.3 | -0.81 | 1.80 | 0.83 | 0.84 | — | 13782 | 986 | 14 | 290 | 0 | 0 | 0 | logfile |
✔ | 5JUY | 8178 | 2023-11-19 | 2016-05-10 | 4.1 | 4.28 | — | 4.1 | 0.009 | 1.23 | 0.0 | 0.05 | 10.72 | 0.00 | 1.447 | 16.11 | 0.71 | 6.6 | 93.0 | 0.4 | -3.18 | 0.76 | 0.55 | — | 4.1 | 0.003 | 0.66 | 0.0 | 0.04 | 12.04 | 0.00 | 2.092 | 12.45 | 0.00 | 5.3 | 94.6 | 0.1 | -0.61 | 1.62 | 0.84 | 0.69 | — | 76058 | 9461 | 32 | 0 | 14 | 0 | 0 | logfile |
✔ | 7DTU | 30854 | 2023-11-15 | 2021-01-06 | 4.4 | 4.54 | — | 3.7 | 0.006 | 0.90 | 0.0 | 0.06 | 14.57 | 0.01 | 2.277 | 6.85 | 0.00 | 9.4 | 90.6 | 0.0 | -3.95 | 0.68 | 0.79 | — | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 13.14 | 0.00 | 2.169 | 11.99 | 0.00 | 6.5 | 93.5 | 0.0 | -0.70 | 1.10 | 0.68 | 0.80 | — | 10846 | 1558 | 8 | 0 | 14 | 0 | 0 | logfile |
✔ | 6PVQ | 20497 | 2023-11-17 | 2019-07-21 | 4.75 | 4.68 | — | 4.6 | 0.008 | 1.32 | 0.0 | 0.06 | 13.01 | 0.01 | 2.244 | 9.74 | 1.15 | 14.4 | 85.2 | 0.4 | -5.23 | 0.66 | 0.75 | — | 4.5 | 0.003 | 0.81 | 0.0 | 0.04 | 13.47 | 0.00 | 2.171 | 14.10 | 0.00 | 11.8 | 88.0 | 0.2 | -2.25 | 1.10 | 0.67 | 0.77 | — | 17640 | 2160 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7X24 | 32957 | 2023-11-15 | 2022-02-25 | 3.4 | 2.84 | 3.24 | 3.2 | 0.006 | 1.21 | 0.0 | 0.05 | 15.74 | 0.01 | 2.080 | 8.34 | 0.00 | 4.0 | 96.0 | 0.0 | 0.37 | 0.65 | 0.82 | 2.68 | 3.1 | 0.004 | 0.61 | 0.0 | 0.04 | 16.67 | 0.00 | 1.956 | 9.40 | 0.00 | 4.9 | 95.1 | 0.0 | 0.14 | 0.29 | 0.66 | 0.84 | 2.54 | 10286 | 1263 | 4 | 0 | 14 | 0 | 0 | logfile |
✔ | 7ZH6 | 14725 | 2023-11-13 | 2022-04-05 | 3.67 | 4.10 | 0.95 | 4.2 | 0.006 | 0.90 | 0.0 | 0.06 | 16.13 | 0.01 | 1.607 | 26.36 | 1.26 | 6.4 | 93.6 | 0.0 | 0.99 | 0.54 | 0.73 | 1.36 | 4.2 | 0.003 | 0.73 | 0.0 | 0.04 | 16.88 | 0.00 | 2.217 | 14.09 | 0.00 | 6.0 | 94.0 | 0.0 | 0.95 | 1.12 | 0.54 | 0.74 | 1.24 | 3771 | 478 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6PWX | 20514 | 2023-11-19 | 2019-07-23 | 4.2 | 4.53 | — | 4.2 | 0.003 | 0.59 | 0.0 | 0.04 | 27.24 | 0.00 | 2.098 | 13.58 | 3.58 | 4.5 | 95.5 | 0.0 | -1.76 | 0.89 | 0.85 | — | 4.2 | 0.005 | 0.70 | 0.0 | 0.04 | 26.62 | 0.01 | 2.073 | 20.17 | 0.00 | 4.8 | 95.2 | 0.0 | 0.15 | 1.23 | 0.90 | 0.86 | — | 14411 | 1074 | 11 | 292 | 0 | 0 | 0 | logfile |
✔ | 6HQE | 0252 | 2023-11-14 | 2018-09-24 | 4.4 | 4.34 | — | 4.4 | 0.009 | 1.25 | 0.0 | 0.06 | 9.67 | 0.01 | 2.307 | 6.79 | 0.00 | 4.8 | 95.2 | 0.0 | -7.05 | 0.65 | 0.85 | — | 4.4 | 0.004 | 0.77 | 0.0 | 0.04 | 11.97 | 0.01 | 2.226 | 19.13 | 0.00 | 2.7 | 97.3 | 0.0 | 1.18 | 1.68 | 0.64 | 0.83 | — | 9360 | 1196 | 52 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oNT | 17000 | 2023-11-13 | 2023-04-03 | 3.66 | 3.95 | 3.45 | 3.9 | 0.006 | 0.67 | 0.0 | 0.04 | 16.01 | 0.01 | 1.908 | 33.89 | 0.87 | 6.7 | 93.3 | 0.0 | 1.63 | 0.63 | 0.79 | 0.81 | 3.9 | 0.003 | 0.54 | 0.0 | 0.04 | 15.80 | 0.00 | 2.083 | 7.87 | 0.00 | 5.6 | 94.4 | 0.0 | 1.77 | 0.33 | 0.63 | 0.77 | 1.05 | 4316 | 558 | 3 | 0 | 1 | 1 | 0 | logfile |
✔ | 7A97 | 11687 | 2023-11-21 | 2020-09-01 | 4.4 | 5.14 | 4.59 | 4.5 | 0.002 | 0.48 | 1.0 | 0.04 | 5.51 | 0.00 | 2.074 | 4.87 | 0.26 | 10.3 | 89.7 | 0.0 | -4.43 | 0.88 | 0.78 | — | 4.5 | 0.006 | 0.78 | 0.0 | 0.04 | 9.24 | 0.00 | 2.040 | 16.92 | 0.00 | 5.8 | 94.2 | 0.0 | -1.11 | 2.57 | 0.90 | 0.84 | — | 34626 | 4373 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NXD | 12637 | 2023-11-15 | 2021-03-18 | 4.6 | 8.22 | 6.02 | 6.0 | 0.013 | 1.51 | 0.0 | 0.11 | 9.25 | 0.03 | 1.831 | 64.77 | 1.03 | 4.0 | 96.0 | 0.1 | -1.02 | 0.80 | 0.44 | — | 6.0 | 0.005 | 0.89 | 0.0 | 0.05 | 11.12 | 0.01 | 1.813 | 36.75 | 0.00 | 7.8 | 92.2 | 0.0 | -1.51 | 1.55 | 0.90 | 0.73 | — | 12805 | 1595 | 18 | 0 | 48 | 0 | 0 | logfile |