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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6D3R | 7793 | 2023-04-20 | 2018-04-16 | 4.3 | 4.80 | 4.40 | 4.5 | 0.017 | 1.75 | 0.0 | 0.10 | 9.07 | 0.01 | 2.385 | 0.57 | 0.00 | 1.5 | 98.5 | 0.0 | 0.66 | 0.66 | 0.76 | — | 4.5 | 0.003 | 0.65 | 0.0 | 0.04 | 11.96 | 0.00 | 2.185 | 7.56 | 0.00 | 3.4 | 96.6 | 0.0 | 1.90 | 1.20 | 0.68 | 0.78 | — | 7610 | 1127 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7N65 | 24195 | 2023-04-25 | 2021-06-07 | 4.15 | 4.35 | — | 4.2 | 0.011 | 1.36 | 0.0 | 0.07 | 14.95 | 0.01 | 1.935 | 36.06 | 4.29 | 15.2 | 84.6 | 0.2 | -4.44 | 0.78 | 0.77 | — | 4.2 | 0.004 | 0.86 | 0.0 | 0.05 | 13.50 | 0.00 | 2.139 | 19.44 | 0.00 | 11.1 | 88.9 | 0.0 | -2.77 | 0.73 | 0.77 | 0.75 | — | 21525 | 2454 | 72 | 0 | 189 | 0 | 0 | logfile |
✔ | 7T3o | 25666 | 2023-04-20 | 2021-12-08 | 3.3 | 3.72 | — | 3.7 | 0.006 | 0.68 | 0.0 | 0.05 | 13.49 | 0.00 | 2.284 | 3.91 | 0.29 | 7.1 | 92.9 | 0.0 | -3.36 | 0.49 | 0.86 | 1.84 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 16.17 | 0.00 | 2.229 | 6.17 | 0.00 | 3.6 | 96.4 | 0.0 | 0.21 | 0.58 | 0.48 | 0.84 | 1.64 | 3410 | 452 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5T9S | 8375 | 2023-04-24 | 2016-09-09 | 4.2 | 4.32 | 4.62 | 4.2 | 0.004 | 0.88 | 0.0 | 0.05 | 9.86 | 0.01 | 1.373 | 3.99 | 0.50 | 10.3 | 89.5 | 0.1 | -5.16 | 0.72 | 0.73 | — | 4.2 | 0.005 | 0.79 | 0.0 | 0.04 | 12.46 | 0.00 | 2.092 | 15.41 | 0.00 | 13.6 | 86.3 | 0.1 | -2.08 | 0.92 | 0.73 | 0.76 | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✔ | 7CF9 | 30343 | 2023-04-22 | 2020-06-24 | 4.7 | 4.24 | 5.21 | 4.0 | 0.006 | 1.24 | 0.0 | 0.06 | 16.01 | 0.01 | 1.538 | 5.47 | 1.67 | 6.2 | 93.7 | 0.1 | -4.86 | 0.79 | 0.68 | — | 4.0 | 0.003 | 0.76 | 0.0 | 0.04 | 13.67 | 0.00 | 2.032 | 14.49 | 0.00 | 5.5 | 94.5 | 0.0 | -2.02 | 1.79 | 0.81 | 0.74 | — | 116104 | 14416 | 12 | 0 | 1820 | 0 | 0 | logfile |
✔ | 7Li7 | 23362 | 2023-04-20 | 2021-01-26 | 4.1 | 4.15 | — | 4.2 | 0.002 | 0.61 | 0.0 | 0.06 | 12.21 | 0.00 | 2.297 | 10.16 | 0.00 | 4.2 | 95.8 | 0.0 | -2.70 | 0.52 | 0.67 | — | 4.1 | 0.003 | 0.66 | 0.0 | 0.04 | 12.76 | 0.00 | 2.215 | 13.30 | 0.00 | 5.8 | 94.2 | 0.0 | -1.41 | 0.98 | 0.66 | 0.77 | — | 6177 | 765 | 5 | 0 | 13 | 0 | 0 | logfile |
✔ | 7FDA | 31538 | 2023-04-22 | 2021-07-16 | 4.2 | 3.94 | — | 3.5 | 0.003 | 0.56 | 0.0 | 0.04 | 11.99 | 0.00 | 1.871 | 8.71 | 0.00 | 5.8 | 94.2 | 0.0 | -0.86 | 0.72 | 0.63 | — | 3.1 | 0.004 | 0.75 | 0.0 | 0.04 | 13.16 | 0.00 | 2.055 | 16.36 | 0.00 | 5.8 | 94.2 | 0.0 | -0.77 | 1.81 | 0.77 | 0.78 | — | 64497 | 8295 | 31 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VWJ | 21418 | 2023-04-22 | 2020-02-19 | 4.21 | 4.58 | — | 4.2 | 0.005 | 0.99 | 0.0 | 0.05 | 13.45 | 0.01 | 1.915 | 9.24 | 1.20 | 4.8 | 94.8 | 0.4 | -1.20 | 0.79 | 0.65 | — | 4.2 | 0.003 | 0.66 | 0.0 | 0.05 | 12.86 | 0.00 | 2.080 | 10.18 | 0.00 | 8.9 | 91.1 | 0.0 | -1.44 | 1.53 | 0.80 | 0.67 | — | 11799 | 747 | 2 | 0 | 0 | 0 | 5789 | logfile |
✔ | 7B6D | 12052 | 2023-04-21 | 2020-12-07 | 4.27 | 2.60 | — | 2.5 | 0.005 | 0.87 | 0.0 | 0.05 | 14.40 | 0.01 | 2.049 | 32.99 | 0.43 | 10.2 | 89.7 | 0.1 | -2.46 | 0.78 | 0.74 | — | 2.5 | 0.003 | 0.72 | 0.0 | 0.05 | 14.41 | 0.00 | 2.080 | 23.40 | 0.00 | 9.1 | 90.9 | 0.0 | -1.38 | 1.33 | 0.78 | 0.75 | — | 10470 | 1290 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VRH | 21368 | 2023-04-20 | 2020-02-07 | 3.3 | 3.68 | 3.56 | 3.6 | 0.004 | 0.60 | 0.0 | 0.04 | 12.99 | 0.00 | 2.212 | 9.91 | 0.00 | 5.1 | 94.9 | 0.0 | -3.01 | 0.45 | 0.70 | 2.12 | 3.6 | 0.003 | 0.57 | 0.0 | 0.04 | 15.00 | 0.00 | 2.158 | 9.18 | 0.00 | 5.3 | 94.7 | 0.0 | -0.60 | 0.58 | 0.48 | 0.73 | 1.90 | 6142 | 764 | 4 | 0 | 5 | 0 | 0 | logfile |
✔ | 5T9V | 8376 | 2023-04-24 | 2016-09-09 | 4.4 | 4.79 | 4.75 | 4.5 | 0.004 | 0.90 | 4.0 | 0.05 | 9.94 | 0.01 | 1.374 | 5.64 | 0.54 | 10.5 | 89.3 | 0.2 | -4.84 | 0.81 | 0.78 | — | 4.5 | 0.003 | 0.72 | 0.0 | 0.04 | 11.70 | 0.00 | 2.114 | 16.07 | 0.00 | 10.7 | 89.1 | 0.1 | -1.35 | 0.84 | 0.82 | 0.80 | — | 121456 | 13500 | 12 | 0 | 3720 | 0 | 0 | logfile |
✔ | 8E99 | 27961 | 2023-04-24 | 2022-08-26 | 4.24 | 4.70 | 4.27 | 4.5 | 0.004 | 0.82 | 2.0 | 0.05 | 10.60 | 0.01 | 1.579 | 8.15 | 0.30 | 7.4 | 92.2 | 0.3 | -1.79 | 0.73 | 0.75 | — | 4.5 | 0.003 | 0.69 | 0.0 | 0.05 | 10.73 | 0.00 | 2.204 | 6.12 | 0.00 | 7.8 | 91.9 | 0.2 | -1.34 | 0.47 | 0.74 | 0.77 | — | 17583 | 2710 | 11 | 0 | 10 | 0 | 0 | logfile |
✔ | 7JSE | 22451 | 2023-04-22 | 2020-08-14 | 4.6 | 5.13 | — | 4.2 | 0.001 | 0.38 | 0.0 | 0.02 | 10.51 | 0.00 | 2.425 | 0.00 | 0.00 | 11.4 | 88.0 | 0.6 | -2.68 | 0.79 | 0.50 | — | 3.9 | 0.007 | 1.10 | 0.0 | 0.09 | 14.86 | 0.00 | 2.156 | 11.87 | 0.00 | 20.1 | 79.9 | 0.0 | -3.21 | 2.77 | 0.87 | 0.64 | — | 13288 | 3168 | 24 | 32 | 0 | 0 | 0 | logfile |
✔ | 7WB5 | 32395 | 2023-04-19 | 2021-12-15 | 3.7 | 3.89 | — | 3.9 | 0.011 | 1.41 | 0.0 | 0.09 | 18.47 | 0.02 | 2.188 | 18.30 | 14.00 | 18.2 | 79.6 | 2.2 | -4.90 | 0.61 | 0.78 | 2.04 | 3.9 | 0.004 | 0.83 | 0.0 | 0.04 | 16.86 | 0.01 | 2.186 | 16.09 | 0.00 | 10.4 | 89.6 | 0.0 | -3.57 | 1.62 | 0.61 | 0.77 | 2.22 | 3256 | 408 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 5TAQ | 8382 | 2023-04-24 | 2016-09-10 | 4.1 | 4.24 | 4.25 | 4.1 | 0.005 | 0.97 | 0.0 | 0.05 | 10.16 | 0.01 | 1.373 | 4.58 | 0.43 | 10.9 | 88.9 | 0.2 | -5.26 | 0.76 | 0.78 | — | 4.1 | 0.005 | 0.79 | 0.0 | 0.04 | 12.30 | 0.00 | 2.046 | 14.49 | 0.00 | 12.5 | 87.4 | 0.1 | -1.92 | 1.94 | 0.77 | 0.80 | — | 121456 | 13500 | 12 | 0 | 3720 | 0 | 0 | logfile |
✔ | 7SHF | 25126 | 2023-04-24 | 2021-10-08 | 3.4 | 3.68 | — | 3.7 | 0.008 | 1.14 | 1.0 | 0.35 | 16.30 | 0.01 | 2.190 | 9.50 | 0.68 | 7.1 | 92.4 | 0.5 | -3.05 | 0.64 | 0.80 | 2.32 | 3.7 | 0.003 | 0.64 | 0.0 | 0.04 | 16.34 | 0.00 | 2.224 | 6.70 | 0.00 | 6.1 | 93.6 | 0.3 | -1.16 | 1.04 | 0.68 | 0.86 | 1.62 | 11443 | 1326 | 6 | 0 | 24 | 0 | 0 | logfile |
✔ | 7JMi | 22395 | 2023-04-24 | 2020-07-31 | 4.5 | 6.62 | — | 4.3 | 0.004 | 0.92 | 0.0 | 0.05 | 10.07 | 0.01 | 1.373 | 7.47 | 0.31 | 10.5 | 89.3 | 0.2 | -4.79 | 0.58 | 0.34 | — | 4.2 | 0.003 | 0.89 | 0.0 | 0.05 | 11.88 | 0.01 | 2.082 | 18.52 | 0.00 | 11.8 | 88.0 | 0.2 | -3.52 | 0.83 | 0.81 | 0.69 | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✔ | 5MQ0 | 3541 | 2023-04-28 | 2016-12-19 | 4.17 | 4.40 | — | 4.2 | 0.010 | 1.54 | 21.0 | 0.11 | 14.99 | 0.01 | 0.679 | 7.92 | 2.73 | 7.7 | 91.4 | 0.9 | -2.01 | 0.68 | 0.56 | — | 4.0 | 0.003 | 0.69 | 0.0 | 0.04 | 14.55 | 0.00 | 1.925 | 17.57 | 0.00 | 5.7 | 94.2 | 0.1 | 0.09 | 2.11 | 0.74 | 0.73 | — | 77441 | 9673 | 52 | 448 | 99 | 0 | 0 | logfile |
✔ | 7JLX | 22383 | 2023-04-20 | 2020-07-30 | 4.6 | 3.86 | — | 3.7 | 0.001 | 0.42 | 0.0 | 0.04 | 3.80 | 0.00 | 2.240 | 2.96 | 0.00 | 6.7 | 93.3 | 0.0 | 1.23 | 0.54 | 0.51 | — | 3.8 | 0.003 | 0.75 | 0.0 | 0.04 | 7.17 | 0.00 | 2.306 | 8.03 | 0.00 | 17.7 | 82.3 | 0.0 | -2.25 | 2.42 | 0.48 | 0.53 | — | 3288 | 664 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JJJ | 22354 | 2023-04-20 | 2020-07-26 | 4.5 | 4.63 | 4.47 | 4.5 | 0.020 | 1.79 | 0.0 | 0.13 | 10.01 | 0.01 | 2.377 | 0.90 | 0.07 | 2.0 | 98.0 | 0.0 | 0.68 | 0.79 | 0.80 | — | 4.5 | 0.004 | 0.71 | 0.0 | 0.05 | 12.38 | 0.00 | 2.113 | 11.30 | 0.00 | 4.0 | 96.0 | 0.0 | -0.22 | 1.44 | 0.80 | 0.83 | — | 54614 | 6674 | 92 | 0 | 182 | 0 | 0 | logfile |