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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6H3J | 0134 | 2022-12-14 | 2018-07-18 | 3.7 | 3.83 | — | 3.7 | 0.007 | 0.87 | 0.0 | 0.05 | 10.17 | 0.00 | 2.025 | 43.43 | 0.05 | 23.8 | 76.2 | 0.0 | -6.63 | 0.77 | 0.85 | 3.89 | 3.7 | 0.005 | 0.65 | 0.0 | 0.04 | 13.39 | 0.00 | 1.860 | 56.32 | 0.32 | 21.3 | 78.7 | 0.0 | -4.95 | 2.68 | 0.78 | 0.86 | 2.86 | 20301 | 2511 | 3 | 0 | 0 | 0 | 212 | logfile |
✔ | 7KXY | 23067 | 2022-12-12 | 2020-12-05 | 4.4 | 4.55 | 4.44 | 4.5 | 0.004 | 0.82 | 0.0 | 0.05 | 15.13 | 0.01 | 2.197 | 19.44 | 7.18 | 26.0 | 69.8 | 4.2 | -5.90 | 0.63 | 0.60 | — | 4.5 | 0.004 | 0.88 | 0.0 | 0.05 | 14.71 | 0.01 | 2.101 | 25.46 | 0.00 | 18.3 | 81.6 | 0.1 | -4.95 | 0.63 | 0.63 | 0.61 | — | 9510 | 1181 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UMQ | 26607 | 2022-12-11 | 2022-04-07 | 3.29 | 3.64 | 3.16 | 4.2 | 0.023 | 2.11 | 0.0 | 0.10 | 9.85 | 0.01 | 2.540 | 3.14 | 0.00 | 10.0 | 90.0 | 0.0 | -3.35 | 0.51 | 0.74 | 5.90 | 3.8 | 0.003 | 0.80 | 0.0 | 0.04 | 14.16 | 0.00 | 2.326 | 16.18 | 1.54 | 10.3 | 89.7 | 0.0 | -4.95 | 3.38 | 0.43 | 0.75 | 4.26 | 4380 | 620 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 5o3T | 3743 | 2022-12-12 | 2017-05-24 | 3.4 | 3.55 | 3.25 | 4.0 | 0.007 | 0.92 | 0.0 | 0.06 | 10.15 | 0.01 | 2.301 | 15.23 | 1.56 | 14.1 | 85.9 | 0.0 | -6.47 | 0.53 | 0.63 | 2.13 | 3.5 | 0.003 | 0.64 | 0.0 | 0.05 | 12.81 | 0.00 | 2.146 | 10.56 | 0.16 | 10.4 | 89.6 | 0.0 | -4.94 | 1.53 | 0.50 | 0.71 | 3.01 | 11360 | 730 | 10 | 0 | 0 | 0 | 5790 | logfile |
✔ | 7X83 | 33054 | 2022-12-11 | 2022-03-11 | 3.4 | 3.15 | 2.87 | 3.5 | 0.009 | 0.82 | 0.0 | 0.06 | 13.35 | 0.00 | 2.217 | 17.05 | 0.00 | 15.8 | 84.2 | 0.0 | -5.71 | 0.38 | 0.84 | 4.55 | 3.6 | 0.004 | 0.69 | 0.0 | 0.05 | 15.07 | 0.00 | 2.252 | 12.90 | 1.06 | 11.5 | 88.5 | 0.0 | -4.93 | 0.59 | 0.38 | 0.84 | 4.64 | 3258 | 405 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YAT | 33719 | 2022-12-11 | 2022-06-28 | 2.2 | 2.33 | 1.39 | 2.3 | 0.009 | 1.06 | 0.0 | 0.06 | 14.84 | 0.00 | 2.267 | 9.86 | 0.00 | 4.3 | 95.7 | 0.0 | -4.79 | 0.61 | 0.88 | 7.98 | 2.3 | 0.003 | 0.87 | 0.0 | 0.05 | 15.00 | 0.01 | 2.271 | 12.08 | 0.00 | 4.5 | 95.5 | 0.0 | -4.91 | 0.43 | 0.65 | 0.92 | 6.95 | 4129 | 600 | 45 | 0 | 0 | 25 | 0 | logfile |
✔ | 7V4B | 31706 | 2022-12-11 | 2021-08-12 | 3.1 | 3.04 | — | 3.1 | 0.006 | 0.60 | 0.0 | 0.05 | 14.55 | 0.00 | 2.375 | 15.32 | 0.00 | 13.2 | 86.8 | 0.0 | -5.99 | 0.41 | 0.69 | 2.66 | 3.1 | 0.008 | 0.78 | 0.0 | 0.05 | 17.31 | 0.00 | 2.146 | 10.95 | 0.60 | 18.9 | 81.1 | 0.0 | -4.89 | 0.56 | 0.41 | 0.69 | 2.54 | 3336 | 480 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V48 | 31703 | 2022-12-11 | 2021-08-12 | 3.0 | 2.27 | — | 3.3 | 0.002 | 0.48 | 0.0 | 0.05 | 12.91 | 0.00 | 2.295 | 8.64 | 0.00 | 9.8 | 90.2 | 0.0 | -5.61 | 0.37 | 0.75 | 4.10 | 3.3 | 0.004 | 0.67 | 0.0 | 0.05 | 14.30 | 0.00 | 2.225 | 5.45 | 3.03 | 16.7 | 83.3 | 0.0 | -4.88 | 0.50 | 0.38 | 0.76 | 4.90 | 2598 | 378 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VW2 | 21410 | 2022-12-11 | 2020-02-18 | 3.4 | 3.62 | — | 3.8 | 0.006 | 1.13 | 0.0 | 0.06 | 14.20 | 0.01 | 2.292 | 24.13 | 0.00 | 27.3 | 72.7 | 0.0 | -4.46 | 0.42 | 0.71 | 2.71 | 3.9 | 0.005 | 0.96 | 0.0 | 0.05 | 14.94 | 0.00 | 2.171 | 15.12 | 0.95 | 19.5 | 80.5 | 0.0 | -4.88 | 0.44 | 0.40 | 0.72 | 1.55 | 1800 | 240 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6L1U | 0803 | 2022-12-12 | 2019-09-30 | 3.37 | 3.54 | — | 3.5 | 0.011 | 0.90 | 0.0 | 0.06 | 15.32 | 0.00 | 2.138 | 15.24 | 0.00 | 15.8 | 84.2 | 0.0 | -6.06 | 0.47 | 0.83 | 2.58 | 3.5 | 0.005 | 0.71 | 0.0 | 0.05 | 16.53 | 0.00 | 2.169 | 12.36 | 1.37 | 15.9 | 84.1 | 0.0 | -4.87 | 1.97 | 0.48 | 0.85 | 2.64 | 10515 | 1500 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q67 | 13854 | 2022-12-11 | 2021-11-05 | 3.37 | 3.41 | 2.44 | 3.4 | 0.020 | 2.21 | 0.0 | 0.14 | 14.47 | 0.01 | 2.280 | 12.16 | 8.00 | 16.1 | 83.9 | 0.0 | -4.98 | 0.51 | 0.71 | 2.52 | 3.5 | 0.003 | 0.89 | 0.0 | 0.04 | 18.34 | 0.00 | 2.105 | 22.53 | 0.73 | 18.2 | 81.8 | 0.0 | -4.85 | 2.31 | 0.44 | 0.68 | 0.65 | 2618 | 363 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Y1A | 10669 | 2022-12-11 | 2020-02-11 | 4.2 | 3.60 | 1.84 | 4.3 | 0.005 | 1.09 | 0.0 | 0.07 | 9.42 | 0.00 | 2.509 | 15.01 | 0.00 | 4.3 | 95.7 | 0.0 | -4.99 | 0.53 | 0.63 | — | 4.2 | 0.005 | 0.76 | 0.0 | 0.04 | 11.27 | 0.00 | 2.048 | 15.89 | 0.00 | 9.8 | 90.2 | 0.0 | -4.83 | 1.55 | 0.57 | 0.76 | — | 2960 | 400 | 32 | 0 | 16 | 0 | 0 | logfile |
✔ | 6SST | 10305 | 2022-12-11 | 2019-09-09 | 3.4 | 3.46 | — | 3.4 | 0.009 | 0.94 | 0.0 | 0.07 | 16.79 | 0.00 | 2.430 | 5.73 | 2.13 | 10.1 | 89.9 | 0.0 | -4.47 | 0.56 | 0.80 | 6.33 | 3.4 | 0.005 | 0.69 | 0.0 | 0.05 | 15.22 | 0.00 | 2.342 | 10.76 | 0.21 | 14.6 | 85.4 | 0.0 | -4.82 | 0.49 | 0.59 | 0.84 | 5.27 | 4900 | 730 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6R4R | 4727 | 2022-12-11 | 2019-03-23 | 3.4 | 3.01 | 1.77 | 3.8 | 0.008 | 1.43 | 0.0 | 0.08 | 10.87 | 0.01 | 2.308 | 6.73 | 0.00 | 12.0 | 88.0 | 0.0 | -5.16 | 0.32 | 0.64 | 5.08 | 3.7 | 0.005 | 0.82 | 0.0 | 0.05 | 16.51 | 0.00 | 2.111 | 15.74 | 2.27 | 9.1 | 90.9 | 0.0 | -4.78 | 3.89 | 0.31 | 0.67 | 3.65 | 4312 | 539 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RL4 | 24514 | 2022-12-11 | 2021-07-23 | 2.86 | 2.50 | — | 3.1 | 0.015 | 1.16 | 0.0 | 0.07 | 16.04 | 0.01 | 2.535 | 12.04 | 0.00 | 12.5 | 87.5 | 0.0 | -4.62 | 0.39 | 0.82 | 4.55 | 3.0 | 0.012 | 1.00 | 0.0 | 0.05 | 17.03 | 0.01 | 2.258 | 17.96 | 4.75 | 7.8 | 92.2 | 0.0 | -4.76 | 1.13 | 0.39 | 0.84 | 4.87 | 4620 | 680 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VE2 | 21152 | 2022-12-16 | 2019-12-28 | 4.3 | 4.80 | 4.34 | 4.2 | 0.006 | 1.23 | 0.0 | 0.07 | 5.37 | 0.01 | 2.173 | 16.97 | 0.00 | 4.7 | 94.9 | 0.5 | -0.93 | 0.83 | 0.70 | — | 4.2 | 0.007 | 1.24 | 0.0 | 0.05 | 10.04 | 0.01 | 2.049 | 33.59 | 0.00 | 21.9 | 77.6 | 0.6 | -4.75 | 1.35 | 0.89 | 0.76 | — | 30198 | 6153 | 21 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oKS | 20103 | 2022-12-13 | 2019-04-15 | 4.2 | 4.44 | — | 4.3 | 0.008 | 1.15 | 0.0 | 0.05 | 17.36 | 0.01 | 2.299 | 5.88 | 9.80 | 18.3 | 81.7 | 0.0 | -5.50 | 0.78 | 0.81 | — | 4.3 | 0.004 | 0.85 | 0.0 | 0.05 | 14.28 | 0.01 | 2.144 | 15.32 | 0.00 | 17.5 | 82.5 | 0.0 | -4.73 | 2.22 | 0.79 | 0.82 | — | 13244 | 1610 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 7L7H | 23212 | 2022-12-11 | 2020-12-28 | 4.0 | 2.39 | — | 4.0 | 0.008 | 1.47 | 0.0 | 0.08 | 15.10 | 0.01 | 2.199 | 13.87 | 3.53 | 36.3 | 63.7 | 0.0 | -6.00 | 0.47 | 0.60 | — | 4.0 | 0.005 | 0.99 | 0.0 | 0.06 | 16.55 | 0.00 | 2.113 | 18.49 | 1.96 | 32.1 | 67.9 | 0.0 | -4.69 | 0.91 | 0.51 | 0.65 | — | 2430 | 352 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oZG | 13123 | 2022-12-11 | 2021-06-28 | 3.3 | 3.21 | 2.71 | 3.6 | 0.023 | 1.83 | 0.0 | 0.10 | 12.75 | 0.01 | 2.254 | 17.09 | 0.00 | 8.7 | 91.3 | 0.0 | -4.01 | 0.40 | 0.73 | 3.72 | 3.7 | 0.006 | 0.80 | 0.0 | 0.05 | 15.38 | 0.00 | 2.315 | 16.60 | 0.82 | 15.5 | 84.5 | 0.0 | -4.68 | 3.41 | 0.35 | 0.68 | 4.71 | 4960 | 730 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V4C | 31707 | 2022-12-11 | 2021-08-12 | 3.3 | 2.93 | — | 3.4 | 0.008 | 0.75 | 0.0 | 0.06 | 12.47 | 0.00 | 2.305 | 12.50 | 0.00 | 20.0 | 80.0 | 0.0 | -6.54 | 0.40 | 0.83 | 2.37 | 3.4 | 0.003 | 0.61 | 0.0 | 0.05 | 17.76 | 0.00 | 2.159 | 3.79 | 0.76 | 7.8 | 92.2 | 0.0 | -4.65 | 1.18 | 0.39 | 0.82 | 3.35 | 1287 | 186 | 3 | 0 | 0 | 0 | 0 | logfile |