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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6PoM | 20416 | 2023-11-13 | 2019-07-04 | 4.9 | 5.01 | — | 5.0 | 0.003 | 0.64 | 0.0 | 0.03 | 17.29 | 0.00 | 2.075 | 3.10 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.61 | 0.64 | — | 5.0 | 0.010 | 1.29 | 0.0 | 0.06 | 21.60 | 0.01 | 1.918 | 61.40 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.76 | 0.75 | 0.80 | — | 4937 | 0 | 2 | 230 | 0 | 0 | 0 | logfile |
✔ | 4UQ8 | 2676 | 2023-11-20 | 2014-06-21 | 4.95 | 5.05 | 4.64 | 4.9 | 0.012 | 2.07 | 23.0 | 1.38 | 6.71 | 0.01 | 1.032 | 64.12 | 25.00 | 0.0 | 0.0 | 0.0 | — | 0.57 | 0.75 | — | 4.9 | 0.013 | 2.54 | 0.0 | 0.41 | 5.47 | 0.00 | 2.110 | 23.19 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.11 | 0.61 | 0.83 | — | 28647 | 33 | 54 | 0 | 5686 | 0 | 0 | logfile |
✔ | 7XD6 | 33137 | 2023-11-14 | 2022-03-26 | 2.84 | 3.25 | 2.83 | 3.0 | 0.005 | 0.74 | 0.0 | 0.04 | 15.28 | 0.00 | 1.975 | 1.30 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.86 | — | 3.0 | 0.005 | 0.67 | 0.0 | 0.04 | 16.16 | 0.00 | 1.876 | 7.55 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.32 | 0.88 | 0.89 | — | 9843 | 0 | 3 | 459 | 29 | 0 | 0 | logfile |
✔ | 7UVT | 26816 | 2023-11-15 | 2022-05-02 | 3.9 | 4.17 | 4.00 | 4.1 | 0.001 | 0.41 | 0.0 | 0.02 | 16.13 | 0.00 | 1.897 | 6.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.76 | 0.74 | — | 4.1 | 0.006 | 0.72 | 0.0 | 0.04 | 18.00 | 0.01 | 1.911 | 21.68 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.46 | 0.77 | 0.77 | — | 12409 | 0 | 1 | 386 | 0 | 0 | 4149 | logfile |
✔ | 6oDJ | 20021 | 2023-11-19 | 2019-03-26 | 3.5 | 3.75 | — | 3.7 | 0.009 | 1.50 | 0.0 | 0.07 | 11.32 | 0.01 | 2.438 | 2.03 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.81 | 0.81 | — | 3.7 | 0.012 | 1.73 | 0.0 | 0.06 | 7.96 | 0.00 | 2.090 | 10.56 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.60 | 0.82 | 0.83 | — | 25415 | 0 | 17 | 0 | 5083 | 0 | 0 | logfile |
✔ | 7UUQ | 26800 | 2023-11-13 | 2022-04-28 | 3.1 | 3.45 | 2.98 | 3.3 | 0.018 | 1.82 | 0.0 | 0.06 | 18.29 | 0.01 | 1.865 | 20.35 | 0.00 | 0.0 | 100.0 | 0.0 | -9.31 | 0.68 | 0.85 | 2.95 | 3.3 | 0.118 | 4.56 | 11.0 | 0.23 | 30.56 | 0.02 | 1.630 | 55.02 | 2.47 | 64.9 | 32.1 | 3.0 | -10.63 | 0.67 | 0.73 | 0.90 | 3.19 | 4760 | 364 | 98 | 0 | 98 | 0 | 0 | logfile |
✔ | 6oEH | 20020 | 2023-11-21 | 2019-03-27 | 3.8 | 3.93 | — | 3.7 | 0.010 | 1.38 | 0.0 | 0.07 | 11.62 | 0.01 | 2.381 | 2.81 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.38 | 0.77 | — | 3.7 | 0.007 | 1.05 | 0.0 | 0.04 | 5.09 | 0.00 | 2.203 | 12.28 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.52 | 0.40 | 0.80 | — | 32900 | 0 | 14 | 0 | 6580 | 0 | 0 | logfile |
✔ | 7XD4 | 33135 | 2023-11-14 | 2022-03-26 | 3.89 | 4.13 | — | 3.8 | 0.003 | 0.59 | 0.0 | 0.03 | 15.73 | 0.00 | 1.880 | 1.73 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.85 | 0.73 | — | 3.8 | 0.007 | 0.78 | 0.0 | 0.04 | 17.52 | 0.01 | 1.755 | 18.36 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.84 | 0.87 | 0.78 | — | 9062 | 0 | 1 | 423 | 28 | 0 | 0 | logfile |
✔ | 7SAM | 24952 | 2023-11-13 | 2021-09-22 | 4.3 | 6.95 | 4.38 | 4.2 | 0.001 | 0.39 | 0.0 | 0.02 | 13.28 | 0.00 | 1.952 | 2.96 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.84 | 0.51 | — | 4.3 | 0.007 | 0.89 | 0.0 | 0.04 | 22.81 | 0.01 | 1.797 | 83.72 | 0.00 | 0.0 | 0.0 | 0.0 | — | 5.81 | 0.96 | 0.88 | — | 5399 | 0 | 1 | 169 | 0 | 0 | 1802 | logfile |
✔ | 8CL4 | 16712 | 2023-11-17 | 2023-02-16 | 3.14 | 3.69 | 3.44 | 3.6 | 0.004 | 0.82 | 0.0 | 0.05 | 12.07 | 0.01 | 2.192 | 3.59 | 0.00 | 0.0 | 100.0 | 0.0 | -0.83 | 0.53 | 0.78 | 2.49 | 3.6 | 0.003 | 0.68 | 0.0 | 0.04 | 16.83 | 0.00 | 2.207 | 10.69 | 0.14 | 1.7 | 98.3 | 0.0 | 1.32 | 2.42 | 0.55 | 0.82 | 1.20 | 13335 | 1725 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YGA | 33813 | 2023-11-14 | 2022-07-11 | 2.35 | 3.08 | 2.44 | 2.8 | 0.008 | 0.62 | 0.0 | 0.04 | 15.27 | 0.01 | 1.779 | 10.87 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.89 | 0.87 | — | 2.8 | 0.007 | 0.60 | 0.0 | 0.04 | 15.40 | 0.00 | 1.828 | 12.41 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.16 | 0.89 | 0.88 | — | 8692 | 0 | 3 | 407 | 8 | 0 | 0 | logfile |
✔ | 7XD3 | 33134 | 2023-11-14 | 2022-03-26 | 4.05 | 4.16 | — | 3.8 | 0.003 | 0.62 | 0.0 | 0.04 | 16.04 | 0.00 | 1.960 | 1.21 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.85 | 0.74 | — | 3.9 | 0.007 | 0.80 | 0.0 | 0.04 | 17.33 | 0.01 | 1.680 | 17.06 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.79 | 0.87 | 0.82 | — | 9062 | 0 | 1 | 423 | 28 | 0 | 0 | logfile |
✔ | 7PTL | 13630 | 2023-11-18 | 2021-09-27 | 4.9 | 10.06 | 4.95 | — | 0.005 | 1.01 | 0.0 | 0.06 | 16.11 | 0.01 | 2.401 | 0.61 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.88 | 0.79 | — | — | 0.007 | 0.89 | 0.0 | 0.04 | 21.14 | 0.01 | 1.735 | 83.10 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.49 | 0.92 | 0.92 | — | 23080 | 0 | 1 | 720 | 0 | 0 | 7743 | logfile |
✔ | 6o1o | 0454 | 2023-11-16 | 2019-02-21 | 3.8 | 4.00 | — | 3.6 | 0.008 | 1.55 | 0.0 | 0.07 | 15.00 | 0.01 | 2.295 | 4.58 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.72 | 0.70 | — | 3.6 | 0.013 | 1.78 | 0.0 | 0.07 | 13.81 | 0.00 | 1.989 | 32.10 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.70 | 0.78 | 0.76 | — | 15193 | 0 | 14 | 66 | 2757 | 0 | 0 | logfile |
✔ | 7XD7 | 33138 | 2023-11-14 | 2022-03-26 | 3.02 | 3.40 | — | 3.1 | 0.003 | 0.61 | 0.0 | 0.04 | 14.03 | 0.00 | 1.736 | 0.77 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.86 | — | 3.1 | 0.007 | 0.67 | 0.0 | 0.04 | 15.11 | 0.00 | 1.866 | 7.88 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.19 | 0.92 | 0.92 | — | 8693 | 0 | 1 | 405 | 30 | 0 | 0 | logfile |
✔ | 8HD7 | 34671 | 2023-11-14 | 2022-11-03 | 3.52 | 3.99 | 3.58 | 3.3 | 0.003 | 0.60 | 0.0 | 0.03 | 14.67 | 0.00 | 1.927 | 2.96 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.89 | 0.77 | — | 3.3 | 0.008 | 0.83 | 0.0 | 0.05 | 16.67 | 0.01 | 1.800 | 17.97 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.13 | 0.90 | 0.82 | — | 8983 | 0 | 1 | 419 | 28 | 0 | 0 | logfile |
✔ | 7URM | 26714 | 2023-11-13 | 2022-04-22 | 3.0 | 3.11 | 3.56 | 2.9 | 0.009 | 1.41 | 0.0 | 0.11 | 23.67 | 0.01 | 2.440 | 0.70 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.14 | 0.53 | — | 3.0 | 0.007 | 1.16 | 0.0 | 0.05 | 22.80 | 0.01 | 1.988 | 29.25 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.68 | 0.15 | 0.54 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 8CL2 | 16710 | 2023-11-17 | 2023-02-16 | 3.45 | 3.69 | 3.44 | 3.6 | 0.004 | 0.82 | 0.0 | 0.05 | 12.07 | 0.01 | 2.192 | 3.59 | 0.00 | 0.0 | 100.0 | 0.0 | -0.83 | 0.54 | 0.79 | 2.49 | 3.6 | 0.003 | 0.68 | 0.0 | 0.04 | 16.83 | 0.00 | 2.207 | 10.69 | 0.14 | 1.7 | 98.3 | 0.0 | 1.32 | 2.42 | 0.56 | 0.84 | 1.20 | 13335 | 1725 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q5A | 13830 | 2023-11-15 | 2021-11-03 | 2.46 | 2.69 | — | 2.6 | 0.112 | 1.10 | 0.0 | 0.06 | 9.54 | 0.00 | 2.247 | 3.06 | 0.00 | 0.0 | 100.0 | 0.0 | 0.99 | 0.66 | 0.84 | 6.72 | 2.6 | 0.055 | 4.01 | 258.0 | 0.21 | 16.76 | 0.02 | 1.950 | 33.36 | 2.52 | 0.0 | 100.0 | 0.0 | 0.88 | 1.64 | 0.67 | 0.85 | 6.22 | 61600 | 5600 | 800 | 0 | 1600 | 0 | 0 | logfile |
✔ | 7T6E | 25714 | 2023-11-13 | 2021-12-13 | 3.1 | 3.11 | — | 3.1 | 0.129 | 5.90 | 125.0 | 0.23 | 23.20 | 0.02 | 2.041 | 30.29 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.60 | 0.87 | — | 3.1 | 0.122 | 5.61 | 134.0 | 0.36 | 21.80 | 0.02 | 2.082 | 31.46 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.19 | 0.66 | 0.90 | — | 3480 | 0 | 60 | 0 | 300 | 0 | 0 | logfile |