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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6CS0 | 7578 | 2023-04-27 | 2018-03-19 | 3.8 | 3.92 | 3.84 | 3.8 | 0.007 | 1.01 | 0.0 | 0.06 | 9.26 | 0.01 | 2.254 | 6.77 | 0.04 | 7.8 | 92.2 | 0.0 | -4.10 | 0.73 | 0.66 | 1.18 | 3.8 | 0.003 | 0.70 | 0.0 | 0.05 | 13.19 | 0.00 | 2.106 | 14.92 | 0.11 | 7.4 | 92.6 | 0.0 | -2.21 | 0.79 | 0.74 | 0.67 | 0.72 | 25909 | 3205 | 25 | 0 | 66 | 0 | 0 | logfile |
✔ | 6LR4 | 0957 | 2023-04-21 | 2020-01-15 | 3.0 | 3.16 | — | 3.1 | 0.011 | 1.00 | 0.0 | 0.06 | 10.34 | 0.01 | 2.289 | 2.99 | 0.09 | 5.8 | 94.2 | 0.0 | -3.96 | 0.64 | 0.84 | 4.36 | 3.1 | 0.005 | 0.68 | 0.0 | 0.04 | 15.05 | 0.00 | 2.185 | 5.33 | 1.95 | 5.3 | 94.7 | 0.0 | 0.02 | 0.54 | 0.67 | 0.87 | 2.81 | 10838 | 1314 | 13 | 0 | 27 | 0 | 0 | logfile |
✔ | 7W7E | 32342 | 2023-04-20 | 2021-12-04 | 3.4 | 3.51 | — | 3.9 | 0.004 | 0.66 | 2.0 | 0.05 | 14.41 | 0.00 | 2.120 | 8.28 | 0.32 | 8.8 | 91.2 | 0.0 | -1.54 | 0.68 | 0.82 | 2.16 | 3.9 | 0.003 | 0.62 | 0.0 | 0.04 | 16.60 | 0.00 | 2.193 | 9.52 | 0.22 | 6.4 | 93.6 | 0.0 | -0.79 | 0.99 | 0.68 | 0.83 | 1.83 | 8524 | 1090 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 6M02 | 30028 | 2023-04-24 | 2020-02-19 | 3.2 | 3.49 | 3.90 | 3.9 | 0.006 | 0.96 | 0.0 | 0.05 | 16.35 | 0.01 | 2.263 | 6.38 | 1.64 | 7.0 | 93.0 | 0.0 | -6.29 | 0.60 | 0.70 | 1.57 | 3.9 | 0.003 | 0.69 | 0.0 | 0.04 | 17.04 | 0.00 | 2.284 | 10.32 | 0.52 | 4.1 | 95.9 | 0.0 | -1.79 | 1.20 | 0.61 | 0.71 | 1.40 | 18935 | 2345 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7L2W | 23143 | 2023-04-24 | 2020-12-17 | 3.16 | 3.33 | 3.09 | 3.3 | 0.011 | 1.03 | 0.0 | 0.05 | 14.26 | 0.01 | 2.075 | 2.37 | 0.47 | 5.8 | 94.2 | 0.0 | 0.57 | 0.64 | 0.86 | 2.77 | 3.3 | 0.004 | 0.64 | 0.0 | 0.04 | 15.87 | 0.00 | 2.121 | 7.85 | 0.16 | 5.7 | 94.3 | 0.0 | 0.92 | 3.52 | 0.64 | 0.87 | 2.02 | 17737 | 2144 | 11 | 0 | 9 | 4 | 0 | logfile |
✔ | 7MZD | 24090 | 2023-04-24 | 2021-05-24 | 2.9 | 3.17 | 2.77 | 3.2 | 0.010 | 0.79 | 0.0 | 0.05 | 10.48 | 0.01 | 2.252 | 1.11 | 0.59 | 4.0 | 96.0 | 0.0 | 1.32 | 0.64 | 0.88 | 3.97 | 3.2 | 0.004 | 0.73 | 0.0 | 0.04 | 15.97 | 0.00 | 2.137 | 8.21 | 1.54 | 6.1 | 93.9 | 0.0 | 1.41 | 1.13 | 0.64 | 0.90 | 3.14 | 17486 | 2128 | 12 | 0 | 6 | 4 | 0 | logfile |
✔ | 7TRC | 26085 | 2023-04-23 | 2022-01-28 | 3.3 | 3.10 | — | 3.3 | 0.003 | 0.64 | 0.0 | 0.04 | 14.83 | 0.00 | 2.121 | 8.21 | 0.21 | 4.2 | 95.8 | 0.0 | -1.82 | 0.66 | 0.74 | 2.50 | 3.2 | 0.003 | 0.63 | 0.0 | 0.04 | 16.61 | 0.00 | 2.135 | 9.95 | 0.21 | 4.3 | 95.7 | 0.0 | -1.17 | 0.51 | 0.68 | 0.77 | 2.09 | 14747 | 1599 | 10 | 92 | 0 | 0 | 0 | logfile |
✔ | 7W6P | 32331 | 2023-04-20 | 2021-12-02 | 3.47 | 3.79 | — | 9.6 | 0.004 | 0.70 | 0.0 | 0.04 | 13.78 | 0.00 | 2.196 | 14.60 | 0.11 | 7.0 | 93.0 | 0.0 | -0.94 | 0.22 | 0.11 | 0.18 | 8.7 | 0.003 | 0.68 | 0.0 | 0.04 | 15.37 | 0.00 | 2.199 | 14.66 | 0.44 | 5.7 | 94.3 | 0.0 | -0.83 | 1.94 | 0.31 | 0.25 | 0.54 | 8408 | 1083 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7XPZ | 33386 | 2023-04-19 | 2022-05-06 | 3.4 | 3.31 | 3.34 | 3.6 | 0.005 | 0.73 | 0.0 | 0.05 | 12.26 | 0.01 | 2.311 | 6.57 | 0.58 | 5.5 | 94.5 | 0.0 | -6.77 | 0.49 | 0.79 | 3.43 | 3.6 | 0.004 | 0.68 | 0.0 | 0.04 | 14.09 | 0.00 | 2.156 | 8.10 | 0.58 | 5.0 | 95.0 | 0.0 | -0.80 | 1.17 | 0.43 | 0.76 | 2.59 | 3227 | 402 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PSN | 13615 | 2023-04-21 | 2021-09-23 | 2.9 | 3.55 | — | 3.5 | 0.009 | 0.82 | 0.0 | 0.04 | 14.29 | 0.01 | 1.923 | 4.83 | 0.00 | 2.7 | 97.3 | 0.0 | -3.01 | 0.59 | 0.78 | 3.43 | 3.5 | 0.003 | 0.54 | 0.0 | 0.04 | 16.09 | 0.00 | 1.998 | 7.33 | 1.30 | 1.4 | 98.6 | 0.0 | 1.16 | 0.50 | 0.58 | 0.79 | 2.48 | 9464 | 1170 | 4 | 0 | 8 | 0 | 0 | logfile |
✔ | 7WHM | 32504 | 2023-04-21 | 2021-12-31 | 2.7 | 2.86 | — | 2.8 | 0.006 | 0.64 | 0.0 | 0.05 | 13.85 | 0.00 | 2.155 | 6.30 | 0.00 | 3.1 | 96.9 | 0.0 | 0.15 | 0.43 | 0.87 | 4.68 | 2.8 | 0.003 | 0.51 | 0.0 | 0.04 | 15.95 | 0.00 | 2.260 | 5.62 | 0.56 | 2.3 | 97.7 | 0.0 | 1.45 | 1.11 | 0.40 | 0.84 | 3.69 | 9650 | 1214 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UY0 | 20945 | 2023-04-21 | 2019-11-09 | 3.23 | 3.39 | — | 3.4 | 0.014 | 1.85 | 0.0 | 0.08 | 13.82 | 0.00 | 1.861 | 1.22 | 0.00 | 4.3 | 95.7 | 0.0 | -2.56 | 0.47 | 0.67 | 1.98 | 3.4 | 0.003 | 0.57 | 0.0 | 0.04 | 15.95 | 0.00 | 2.001 | 5.51 | 0.19 | 2.1 | 97.9 | 0.0 | 1.50 | 1.14 | 0.64 | 0.83 | 1.36 | 9684 | 1210 | 1 | 0 | 7 | 0 | 0 | logfile |
✔ | 7W8S | 32358 | 2023-04-20 | 2021-12-08 | 2.85 | 3.08 | — | 3.1 | 0.003 | 0.60 | 0.0 | 0.04 | 11.01 | 0.01 | 2.102 | 0.87 | 3.48 | 3.4 | 96.6 | 0.0 | -4.03 | 0.67 | 0.82 | 4.11 | 3.1 | 0.003 | 0.61 | 0.0 | 0.04 | 15.38 | 0.00 | 2.236 | 2.22 | 2.90 | 2.8 | 97.2 | 0.0 | -1.27 | 0.98 | 0.67 | 0.83 | 3.42 | 6455 | 788 | 4 | 0 | 3 | 0 | 0 | logfile |
✔ | 7SWD | 25471 | 2023-04-22 | 2021-11-19 | 3.59 | 3.73 | — | 3.7 | 0.006 | 0.77 | 0.0 | 0.05 | 13.47 | 0.01 | 2.124 | 14.79 | 0.00 | 4.5 | 95.5 | 0.0 | -0.91 | 0.73 | 0.79 | 2.33 | 3.7 | 0.003 | 0.67 | 0.0 | 0.04 | 16.12 | 0.00 | 2.199 | 13.41 | 0.95 | 4.3 | 95.7 | 0.0 | -0.86 | 1.21 | 0.73 | 0.79 | 2.05 | 12833 | 1652 | 14 | 0 | 9 | 0 | 0 | logfile |
✔ | 6oGY | 20059 | 2023-04-28 | 2019-04-03 | 3.4 | 3.58 | — | 3.7 | 0.006 | 0.79 | 0.0 | 0.05 | 15.76 | 0.01 | 2.283 | 3.56 | 0.18 | 3.8 | 96.1 | 0.0 | -5.60 | 0.41 | 0.85 | 2.69 | 3.7 | 0.003 | 0.60 | 0.0 | 0.04 | 17.37 | 0.00 | 2.182 | 6.30 | 0.55 | 3.3 | 96.7 | 0.0 | -2.25 | 1.16 | 0.38 | 0.85 | 2.09 | 74364 | 9081 | 13 | 6 | 1 | 0 | 0 | logfile |
✔ | 7VMR | 32036 | 2023-04-25 | 2021-10-09 | 3.3 | 2.92 | — | 3.1 | 0.003 | 0.66 | 8.0 | 0.04 | 14.56 | 0.00 | 2.099 | 10.88 | 1.87 | 6.4 | 93.6 | 0.0 | -0.66 | 0.63 | 0.70 | 1.34 | 3.0 | 0.003 | 0.63 | 0.0 | 0.04 | 16.02 | 0.00 | 2.116 | 11.90 | 0.34 | 7.0 | 93.0 | 0.0 | -0.69 | 0.53 | 0.65 | 0.75 | 1.54 | 123548 | 13608 | 12 | 0 | 3000 | 0 | 0 | logfile |
✔ | 7T4Q | 25685 | 2023-04-23 | 2021-12-10 | 2.9 | 3.12 | — | 3.0 | 0.003 | 0.62 | 0.0 | 0.04 | 12.96 | 0.01 | 2.184 | 5.12 | 0.00 | 3.9 | 96.1 | 0.0 | -0.62 | 0.75 | 0.82 | 3.45 | 3.0 | 0.003 | 0.71 | 0.0 | 0.04 | 16.18 | 0.00 | 2.141 | 8.93 | 2.58 | 3.0 | 97.0 | 0.0 | 0.35 | 1.31 | 0.76 | 0.85 | 2.90 | 15473 | 1946 | 15 | 0 | 6 | 0 | 0 | logfile |
✔ | 6PBY | 20295 | 2023-04-26 | 2019-06-14 | 3.67 | 3.77 | — | 3.7 | 0.008 | 0.93 | 0.0 | 0.06 | 14.38 | 0.01 | 2.248 | 6.20 | 0.00 | 4.3 | 95.7 | 0.0 | -3.45 | 0.56 | 0.56 | 2.08 | 3.7 | 0.003 | 0.69 | 0.0 | 0.04 | 15.78 | 0.00 | 2.159 | 12.62 | 0.63 | 3.0 | 97.0 | 0.0 | 0.63 | 1.52 | 0.69 | 0.77 | 1.39 | 23832 | 3268 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RMi | 24572 | 2023-04-20 | 2021-07-27 | 3.2 | 3.78 | 3.15 | 3.7 | 0.004 | 0.84 | 0.0 | 0.05 | 12.68 | 0.01 | 2.296 | 4.36 | 0.00 | 3.4 | 96.6 | 0.0 | -1.03 | 0.69 | 0.72 | 2.32 | 3.7 | 0.003 | 0.60 | 0.0 | 0.04 | 14.60 | 0.00 | 2.196 | 8.23 | 0.57 | 3.1 | 96.9 | 0.0 | 0.53 | 1.28 | 0.66 | 0.78 | 2.20 | 7205 | 960 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7UPR | 26674 | 2023-04-22 | 2022-04-16 | 3.2 | 3.90 | 3.36 | 3.8 | 0.004 | 0.80 | 0.0 | 0.04 | 15.49 | 0.00 | 2.062 | 7.72 | 4.18 | 7.1 | 92.9 | 0.0 | -3.02 | 0.74 | 0.78 | 1.45 | 3.8 | 0.003 | 0.67 | 0.0 | 0.04 | 16.60 | 0.00 | 1.917 | 9.71 | 0.47 | 8.4 | 91.6 | 0.0 | 0.01 | 0.53 | 0.73 | 0.78 | 1.26 | 12780 | 1678 | 12 | 0 | 19 | 0 | 0 | logfile |