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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6XZ7 | 10655 | 2022-04-08 | 2020-02-03 | 2.1 | 2.05 | 2.12 | 2.1 | 0.010 | 0.81 | 1.0 | 0.05 | 14.53 | 0.03 | 1.564 | 6.31 | 3.26 | 2.8 | 96.8 | 0.4 | -2.20 | 0.41 | 0.69 | 5.50 | 2.1 | 0.003 | 0.72 | 0.0 | 0.04 | 14.76 | 0.01 | 1.285 | 6.10 | 2.29 | 2.1 | 97.8 | 0.1 | 0.28 | 0.92 | 0.70 | 0.86 | 5.26 | 94915 | 3351 | 45 | 3169 | 179 | 528 | 0 | logfile |
✔ | 6PXM | 20521 | 2022-04-08 | 2019-07-26 | 2.1 | 2.33 | 2.32 | 2.4 | 0.008 | 0.71 | 0.0 | 0.04 | 16.03 | 0.00 | 2.392 | 1.60 | 0.00 | 0.6 | 99.4 | 0.0 | -3.44 | 0.79 | 0.89 | 5.35 | 2.3 | 0.002 | 0.44 | 0.0 | 0.03 | 17.75 | 0.00 | 2.211 | 4.41 | 0.14 | 1.8 | 98.2 | 0.0 | 5.26 | 1.48 | 0.79 | 0.90 | 3.80 | 32736 | 4080 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LXV | 30007 | 2022-04-04 | 2020-02-12 | 2.1 | 2.18 | — | 2.2 | 0.025 | 1.66 | 0.0 | 0.12 | 16.07 | 0.01 | 2.196 | 2.01 | 2.81 | 3.9 | 95.9 | 0.1 | -1.79 | 0.78 | 0.91 | 6.69 | 2.2 | 0.003 | 0.58 | 0.0 | 0.04 | 16.46 | 0.00 | 2.161 | 4.25 | 0.95 | 2.5 | 97.5 | 0.0 | 0.86 | 0.92 | 0.79 | 0.91 | 6.15 | 54924 | 6448 | 24 | 0 | 16 | 2967 | 0 | logfile |
✔ | 7o6E | 12738 | 2022-04-08 | 2021-04-10 | 2.1 | 1.78 | 2.15 | 1.6 | 0.017 | 1.10 | 0.0 | 0.07 | 18.13 | 0.01 | 2.110 | 3.49 | 0.00 | 2.3 | 97.7 | 0.0 | 2.10 | 0.87 | 0.88 | 6.02 | 1.6 | 0.004 | 0.52 | 0.0 | 0.03 | 18.17 | 0.01 | 2.172 | 3.55 | 0.38 | 0.6 | 99.4 | 0.0 | 4.21 | 0.27 | 0.88 | 0.89 | 5.41 | 35304 | 4248 | 48 | 0 | 0 | 1392 | 0 | logfile |
✔ | 7PF1 | 13364 | 2022-04-09 | 2021-08-11 | 2.1 | 1.83 | — | 2.0 | 0.020 | 1.66 | 0.0 | 0.12 | 14.32 | 0.01 | 1.766 | 1.25 | 0.65 | 1.7 | 98.3 | 0.0 | 1.14 | 0.71 | 0.75 | 6.05 | 1.8 | 0.003 | 0.56 | 0.0 | 0.04 | 17.16 | 0.00 | 1.943 | 10.44 | 0.05 | 1.7 | 98.3 | 0.0 | 5.04 | 1.38 | 0.78 | 0.82 | 7.01 | 41646 | 4176 | 72 | 0 | 263 | 7207 | 0 | logfile |
✔ | 6X19 | 21993 | 2022-04-05 | 2020-05-18 | 2.1 | 2.20 | 2.11 | 2.1 | 0.009 | 1.31 | 6.0 | 0.08 | 14.25 | 0.01 | 2.134 | 12.92 | 1.01 | 2.7 | 97.3 | 0.1 | -1.61 | 0.73 | 0.84 | 4.93 | 2.2 | 0.007 | 1.02 | 0.0 | 0.04 | 16.78 | 0.00 | 2.157 | 6.73 | 1.01 | 1.8 | 98.2 | 0.0 | 1.07 | 1.00 | 0.72 | 0.88 | 4.50 | 10277 | 1258 | 9 | 0 | 1 | 136 | 0 | logfile |
✔ | 7FEB | 31551 | 2022-04-07 | 2021-07-19 | 2.11 | 2.54 | — | 2.6 | 0.004 | 0.65 | 0.0 | 0.05 | 15.91 | 0.01 | 2.211 | 11.24 | 0.30 | 1.5 | 98.5 | 0.0 | 0.07 | 0.75 | 0.82 | 3.11 | 2.6 | 0.003 | 0.60 | 0.0 | 0.04 | 16.51 | 0.00 | 2.076 | 8.64 | 2.76 | 1.6 | 98.4 | 0.0 | 0.66 | 1.95 | 0.75 | 0.85 | 3.10 | 24075 | 3024 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SQ9 | 25380 | 2022-04-05 | 2021-11-04 | 2.11 | 2.06 | — | 2.1 | 0.016 | 1.95 | 0.0 | 0.41 | 17.49 | 0.00 | 2.223 | 5.43 | 0.00 | 2.2 | 97.8 | 0.0 | 1.70 | 0.70 | 0.88 | 5.56 | 2.1 | 0.003 | 0.83 | 0.0 | 0.04 | 16.74 | 0.00 | 2.104 | 3.74 | 1.67 | 2.8 | 97.2 | 0.0 | 2.07 | 1.22 | 0.71 | 0.89 | 5.40 | 15810 | 1876 | 16 | 0 | 18 | 16 | 0 | logfile |
✔ | 7NK7 | 12432 | 2022-04-09 | 2021-02-17 | 2.11 | 2.13 | — | 2.1 | 0.006 | 0.63 | 0.0 | 0.05 | 16.46 | 0.00 | 2.121 | 3.56 | 0.88 | 1.8 | 98.1 | 0.1 | 1.07 | 0.80 | 0.89 | 5.91 | 2.1 | 0.003 | 0.55 | 0.0 | 0.04 | 16.33 | 0.00 | 1.838 | 3.47 | 0.84 | 1.8 | 98.1 | 0.1 | 1.33 | 0.22 | 0.81 | 0.91 | 5.74 | 45644 | 2954 | 20 | 0 | 11 | 459 | 22525 | logfile |
✔ | 7JFo | 22308 | 2022-04-09 | 2020-07-17 | 2.13 | 2.12 | — | 2.1 | 0.022 | 1.67 | 2.0 | 0.11 | 12.07 | 0.01 | 2.198 | 6.69 | 1.23 | 3.9 | 96.1 | 0.0 | -0.96 | 0.72 | 0.78 | 6.96 | 2.1 | 0.004 | 0.70 | 0.0 | 0.05 | 14.50 | 0.01 | 2.200 | 7.22 | 0.77 | 2.8 | 97.2 | 0.0 | 1.05 | 0.78 | 0.70 | 0.81 | 5.91 | 38958 | 4832 | 40 | 0 | 0 | 1198 | 0 | logfile |
✔ | 7RTB | 24680 | 2022-04-04 | 2021-08-12 | 2.14 | 2.32 | 2.23 | 2.3 | 0.003 | 0.57 | 0.0 | 0.04 | 14.48 | 0.00 | 2.277 | 5.37 | 0.77 | 1.6 | 98.4 | 0.0 | -0.80 | 0.64 | 0.69 | 3.38 | 2.3 | 0.003 | 0.59 | 0.0 | 0.04 | 16.87 | 0.00 | 2.263 | 5.14 | 2.21 | 2.5 | 97.5 | 0.0 | 1.23 | 0.67 | 0.68 | 0.82 | 3.94 | 8972 | 1169 | 7 | 0 | 0 | 1 | 0 | logfile |
✔ | 7NKJ | 12441 | 2022-04-09 | 2021-02-18 | 2.17 | 2.16 | — | 2.1 | 0.005 | 0.59 | 0.0 | 0.05 | 16.78 | 0.00 | 1.958 | 2.88 | 1.05 | 1.8 | 98.2 | 0.1 | 1.04 | 0.80 | 0.89 | 6.04 | 2.1 | 0.004 | 0.55 | 0.0 | 0.04 | 16.76 | 0.00 | 1.766 | 2.90 | 1.05 | 1.6 | 98.3 | 0.1 | 1.18 | 0.12 | 0.80 | 0.90 | 5.92 | 45605 | 2945 | 20 | 0 | 11 | 516 | 22478 | logfile |
✔ | 6KQK | 0753 | 2022-04-05 | 2019-08-18 | 2.17 | 3.14 | — | 2.8 | 0.018 | 1.15 | 12.0 | 0.06 | 15.47 | 0.00 | 1.876 | 11.30 | 0.00 | 7.4 | 92.6 | 0.0 | -4.38 | 0.82 | 0.84 | 4.45 | 2.8 | 0.004 | 0.73 | 4.0 | 0.12 | 16.21 | 0.00 | 1.757 | 9.64 | 0.72 | 4.4 | 95.6 | 0.0 | 0.10 | 0.80 | 0.82 | 0.86 | 4.10 | 63373 | 3936 | 24 | 0 | 48 | 0 | 31225 | logfile |
✔ | 7MXY | 24076 | 2022-04-06 | 2021-05-19 | 2.18 | 2.49 | — | 2.5 | 0.006 | 0.66 | 0.0 | 0.04 | 18.00 | 0.00 | 2.195 | 11.50 | 3.20 | 3.3 | 96.7 | 0.0 | 1.25 | 0.50 | 0.66 | 2.36 | 2.4 | 0.007 | 0.66 | 0.0 | 0.04 | 18.15 | 0.00 | 1.950 | 15.00 | 4.84 | 3.7 | 96.3 | 0.0 | 0.55 | 1.14 | 0.53 | 0.70 | 2.59 | 22265 | 1406 | 12 | 0 | 5 | 2 | 11129 | logfile |
✔ | 6WZ5 | 21970 | 2022-04-05 | 2020-05-13 | 2.2 | 2.36 | — | 2.2 | 0.008 | 0.69 | 0.0 | 0.04 | 28.82 | 0.00 | 2.253 | 4.68 | 0.93 | 2.2 | 97.8 | 0.0 | 0.00 | 0.75 | 0.71 | 2.93 | 2.2 | 0.005 | 0.62 | 0.0 | 0.04 | 29.34 | 0.00 | 2.154 | 5.62 | 0.77 | 1.8 | 98.2 | 0.0 | 2.64 | 0.89 | 0.87 | 0.89 | 3.82 | 12443 | 774 | 10 | 306 | 0 | 0 | 0 | logfile |
✔ | 7P8W | 13256 | 2022-04-06 | 2021-07-23 | 2.2 | 2.34 | — | 2.3 | 0.014 | 1.79 | 4.0 | 0.09 | 14.82 | 0.01 | 2.340 | 1.39 | 0.75 | 3.8 | 96.0 | 0.2 | -1.36 | 0.85 | 0.92 | 6.91 | 2.3 | 0.003 | 0.62 | 0.0 | 0.04 | 15.61 | 0.00 | 2.221 | 3.19 | 0.46 | 2.9 | 97.1 | 0.0 | 0.56 | 1.15 | 0.86 | 0.91 | 6.13 | 17668 | 2008 | 12 | 0 | 8 | 1110 | 0 | logfile |
✔ | 7LVK | 23539 | 2022-04-14 | 2021-02-25 | 2.2 | 2.31 | — | 2.4 | 0.009 | 0.93 | 8.0 | 0.06 | 14.61 | 0.02 | 1.324 | 2.41 | 0.81 | 5.1 | 94.8 | 0.2 | -2.34 | 0.64 | 0.86 | 5.37 | 2.4 | 0.006 | 0.72 | 0.0 | 0.04 | 15.08 | 0.01 | 0.971 | 5.69 | 2.00 | 4.7 | 95.2 | 0.1 | -0.37 | 0.97 | 0.67 | 0.88 | 5.15 | 151436 | 3222 | 63 | 3015 | 182 | 2716 | 58704 | logfile |
✔ | 7P6B | 13224 | 2022-04-04 | 2021-07-15 | 2.2 | 1.98 | 2.14 | 2.1 | 0.004 | 0.75 | 0.0 | 0.09 | 13.80 | 0.01 | 2.246 | 4.21 | 0.00 | 3.8 | 96.2 | 0.0 | -2.60 | 0.48 | 0.85 | 6.24 | 2.0 | 0.006 | 0.70 | 0.0 | 0.05 | 17.13 | 0.00 | 2.107 | 8.18 | 0.65 | 4.7 | 95.3 | 0.0 | -2.26 | 0.86 | 0.49 | 0.88 | 6.83 | 4060 | 540 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 5A1A | 2984 | 2022-04-08 | 2015-04-29 | 2.2 | 2.04 | 2.58 | 2.5 | 0.009 | 1.21 | 0.0 | 0.04 | 13.14 | 0.01 | 0.020 | 14.13 | 1.03 | 3.9 | 95.5 | 0.6 | -1.86 | 0.53 | 0.76 | 4.20 | 2.5 | 0.005 | 0.78 | 0.0 | 0.05 | 17.68 | 0.01 | 1.924 | 12.32 | 3.18 | 3.0 | 96.9 | 0.1 | -0.70 | 0.61 | 0.54 | 0.79 | 3.98 | 33696 | 4088 | 12 | 0 | 20 | 776 | 0 | logfile |
✔ | 7ST9 | 25422 | 2022-04-09 | 2021-11-12 | 2.2 | 2.95 | — | 2.8 | 0.002 | 0.46 | 0.0 | 0.04 | 16.91 | 0.00 | 1.796 | 2.94 | 0.71 | 1.5 | 98.5 | 0.0 | 2.56 | 0.82 | 0.78 | 3.47 | 2.8 | 0.009 | 0.65 | 0.0 | 0.04 | 17.52 | 0.00 | 1.698 | 4.13 | 1.39 | 1.3 | 98.7 | 0.0 | 2.04 | 2.70 | 0.82 | 0.86 | 3.70 | 46553 | 2802 | 25 | 36 | 9 | 423 | 22930 | logfile |