The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8B3J | 15830 | 2022-12-11 | 2022-09-16 | 3.1 | 3.34 | 3.18 | 3.3 | 0.005 | 0.63 | 0.0 | 0.05 | 15.71 | 0.00 | 2.144 | 7.61 | 0.00 | 7.6 | 92.4 | 0.0 | -2.49 | 0.44 | 0.88 | 3.25 | 3.3 | 0.005 | 0.63 | 0.0 | 0.05 | 16.25 | 0.00 | 2.127 | 7.16 | 0.32 | 8.2 | 91.8 | 0.0 | -2.31 | 0.24 | 0.44 | 0.88 | 3.00 | 5688 | 718 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7T4N | 25681 | 2022-12-11 | 2021-12-10 | 2.35 | 2.66 | 2.38 | 2.5 | 0.002 | 0.42 | 0.0 | 0.04 | 16.22 | 0.00 | 2.207 | 4.39 | 1.25 | 1.0 | 99.0 | 0.0 | 0.87 | 0.63 | 0.85 | 3.82 | 2.6 | 0.002 | 0.46 | 0.0 | 0.04 | 16.43 | 0.00 | 2.291 | 6.16 | 1.94 | 1.5 | 98.5 | 0.0 | 1.69 | 0.25 | 0.66 | 0.87 | 3.63 | 6476 | 803 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VLK | 32023 | 2022-12-16 | 2021-10-04 | 2.27 | 2.77 | — | 2.6 | 0.002 | 0.50 | 0.0 | 0.04 | 17.01 | 0.00 | 2.195 | 6.63 | 2.51 | 2.0 | 98.0 | 0.0 | 1.38 | 0.76 | 0.84 | 3.20 | 2.6 | 0.002 | 0.53 | 0.0 | 0.04 | 17.21 | 0.00 | 2.176 | 6.84 | 3.11 | 2.3 | 97.7 | 0.0 | 1.49 | 0.25 | 0.77 | 0.86 | 3.17 | 28774 | 3698 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V2L | 31655 | 2022-12-11 | 2021-08-09 | 3.3 | 3.14 | 3.24 | 3.1 | 0.008 | 1.07 | 1.0 | 0.10 | 16.30 | 0.00 | 2.214 | 5.72 | 0.09 | 6.7 | 93.1 | 0.2 | -0.61 | 0.78 | 0.87 | 2.42 | 3.1 | 0.005 | 0.62 | 0.0 | 0.04 | 16.83 | 0.00 | 2.077 | 8.41 | 0.55 | 7.0 | 92.9 | 0.1 | -0.36 | 0.25 | 0.79 | 0.88 | 2.09 | 53410 | 2621 | 24 | 1507 | 2 | 0 | 0 | logfile |
✔ | 7A7C | 11677 | 2022-12-12 | 2020-08-27 | 3.16 | 3.66 | 3.23 | 3.5 | 0.003 | 0.54 | 0.0 | 0.04 | 13.51 | 0.00 | 2.199 | 6.79 | 0.00 | 4.5 | 95.5 | 0.0 | -0.97 | 0.82 | 0.87 | 3.57 | 3.5 | 0.003 | 0.52 | 0.0 | 0.04 | 14.67 | 0.00 | 2.089 | 6.63 | 0.11 | 3.8 | 96.2 | 0.0 | 0.07 | 0.25 | 0.82 | 0.88 | 3.20 | 9387 | 1226 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 7VXP | 32186 | 2022-12-16 | 2021-11-13 | 2.7 | 2.77 | — | 2.7 | 0.008 | 0.82 | 0.0 | 0.05 | 15.94 | 0.02 | 2.172 | 9.79 | 1.18 | 3.6 | 96.4 | 0.1 | 0.00 | 0.76 | 0.89 | 3.94 | 2.7 | 0.003 | 0.53 | 0.0 | 0.04 | 16.21 | 0.00 | 2.199 | 8.23 | 1.55 | 3.4 | 96.5 | 0.1 | 0.40 | 0.25 | 0.75 | 0.89 | 3.75 | 28589 | 3543 | 28 | 0 | 19 | 0 | 0 | logfile |
✔ | 7TTW | 26125 | 2022-12-15 | 2022-02-02 | 2.9 | 2.35 | 2.83 | 2.8 | 0.003 | 0.54 | 0.0 | 0.03 | 15.04 | 0.00 | 2.065 | 3.80 | 0.04 | 4.3 | 95.7 | 0.0 | -2.03 | 0.71 | 0.80 | 3.36 | 2.8 | 0.002 | 0.55 | 0.0 | 0.03 | 15.88 | 0.00 | 2.020 | 4.41 | 3.37 | 4.3 | 95.7 | 0.0 | -1.64 | 0.25 | 0.72 | 0.85 | 2.87 | 80853 | 2661 | 27 | 2801 | 0 | 0 | 0 | logfile |
✔ | 7USW | 26741 | 2022-12-13 | 2022-04-26 | 3.1 | 3.48 | 3.14 | 3.5 | 0.004 | 0.78 | 0.0 | 0.04 | 15.89 | 0.01 | 2.254 | 7.16 | 0.21 | 3.1 | 96.9 | 0.0 | 2.17 | 0.63 | 0.80 | 2.13 | 3.5 | 0.002 | 0.48 | 0.0 | 0.04 | 16.03 | 0.00 | 2.253 | 5.38 | 0.41 | 3.1 | 96.9 | 0.0 | 2.30 | 0.25 | 0.63 | 0.83 | 2.06 | 14322 | 1676 | 12 | 0 | 68 | 0 | 0 | logfile |
✔ | 8A8C | 15229 | 2022-12-12 | 2022-06-22 | 3.1 | 3.35 | 3.12 | 3.4 | 0.007 | 0.68 | 0.0 | 0.14 | 18.00 | 0.01 | 2.201 | 14.90 | 0.80 | 5.9 | 93.9 | 0.2 | -1.68 | 0.70 | 0.86 | 3.26 | 3.4 | 0.003 | 0.70 | 0.0 | 0.07 | 16.94 | 0.00 | 2.153 | 15.22 | 0.60 | 6.1 | 93.7 | 0.2 | -1.90 | 0.25 | 0.70 | 0.86 | 3.32 | 9544 | 1224 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 7P0M | 13148 | 2022-12-15 | 2021-06-30 | 2.75 | 3.51 | 2.75 | 2.7 | 0.002 | 0.44 | 0.0 | 0.04 | 16.31 | 0.00 | 1.800 | 7.70 | 1.88 | 1.7 | 98.3 | 0.0 | 1.65 | 0.95 | 0.88 | 2.52 | 2.8 | 0.003 | 0.51 | 0.0 | 0.04 | 16.53 | 0.00 | 1.963 | 9.50 | 2.10 | 1.8 | 98.2 | 0.0 | 1.52 | 0.25 | 0.96 | 0.89 | 2.20 | 25185 | 3185 | 19 | 0 | 45 | 0 | 0 | logfile |
✔ | 7XJG | 33226 | 2022-12-13 | 2022-04-17 | 2.51 | 2.02 | 2.63 | 1.6 | 0.005 | 0.71 | 0.0 | 0.05 | 22.26 | 0.01 | 1.962 | 7.72 | 3.44 | 4.1 | 95.9 | 0.0 | -0.23 | 0.76 | 0.76 | 2.80 | 1.6 | 0.003 | 0.57 | 0.0 | 0.04 | 21.98 | 0.00 | 2.110 | 7.64 | 4.90 | 4.0 | 96.0 | 0.0 | 0.64 | 0.25 | 0.79 | 0.79 | 2.59 | 13167 | 1066 | 12 | 216 | 2 | 0 | 0 | logfile |
✔ | 7P7J | 13237 | 2022-12-19 | 2021-07-19 | 2.7 | 2.61 | — | 2.3 | 0.005 | 0.77 | 0.0 | 1.47 | 14.69 | 0.01 | 2.212 | 6.70 | 1.25 | 2.4 | 97.5 | 0.0 | -0.28 | 0.91 | 0.90 | 3.67 | 2.4 | 0.012 | 2.18 | 0.0 | 0.45 | 15.07 | 0.00 | 2.097 | 10.43 | 1.59 | 2.2 | 97.8 | 0.0 | 1.34 | 0.26 | 0.91 | 0.89 | 3.54 | 37448 | 4719 | 24 | 0 | 28 | 0 | 0 | logfile |
✔ | 6PCR | 20305 | 2022-12-14 | 2019-06-18 | 2.5 | 3.04 | — | 2.9 | 0.010 | 0.51 | 0.0 | 0.03 | 12.78 | 0.02 | 1.808 | 2.74 | 2.36 | 5.2 | 94.6 | 0.2 | -3.36 | 0.72 | 0.89 | 4.33 | 2.9 | 0.006 | 0.65 | 0.0 | 0.04 | 13.75 | 0.01 | 1.918 | 6.25 | 2.49 | 5.2 | 94.7 | 0.1 | -1.27 | 0.26 | 0.72 | 0.91 | 4.45 | 72166 | 967 | 8 | 3015 | 1 | 0 | 0 | logfile |
✔ | 7ZDQ | 14666 | 2022-12-11 | 2022-03-29 | 3.2 | 2.77 | 3.10 | 2.9 | 0.002 | 0.54 | 0.0 | 0.04 | 15.18 | 0.00 | 2.212 | 6.55 | 0.15 | 2.3 | 97.7 | 0.0 | 1.48 | 0.71 | 0.81 | 3.08 | 3.0 | 0.003 | 0.50 | 0.0 | 0.04 | 16.19 | 0.00 | 2.212 | 6.38 | 0.30 | 2.4 | 97.6 | 0.0 | 1.36 | 0.26 | 0.72 | 0.84 | 3.18 | 6264 | 763 | 3 | 0 | 3 | 0 | 0 | logfile |
✔ | 7V7o | 31776 | 2022-12-15 | 2021-08-21 | 2.9 | 3.72 | — | 3.2 | 0.007 | 0.63 | 0.0 | 0.05 | 13.67 | 0.00 | 2.158 | 7.15 | 0.00 | 5.5 | 94.4 | 0.1 | -0.05 | 0.89 | 0.88 | 2.42 | 3.2 | 0.009 | 0.71 | 0.0 | 0.05 | 14.90 | 0.00 | 2.097 | 8.19 | 0.96 | 5.8 | 94.1 | 0.1 | -0.03 | 0.26 | 0.89 | 0.88 | 2.14 | 25325 | 3092 | 41 | 0 | 83 | 0 | 0 | logfile |
✔ | 7Y12 | 33554 | 2022-12-12 | 2022-06-06 | 3.1 | 2.87 | 3.11 | 3.0 | 0.003 | 0.58 | 1.0 | 0.04 | 15.81 | 0.00 | 2.086 | 10.19 | 0.22 | 3.4 | 96.6 | 0.0 | 0.86 | 0.62 | 0.78 | 2.84 | 3.0 | 0.003 | 0.54 | 1.0 | 0.04 | 16.32 | 0.00 | 2.103 | 10.01 | 0.45 | 3.0 | 97.0 | 0.0 | 0.89 | 0.26 | 0.61 | 0.78 | 2.55 | 8501 | 1110 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 7Y13 | 33555 | 2022-12-11 | 2022-06-06 | 3.1 | 3.20 | 3.10 | 3.2 | 0.005 | 0.68 | 0.0 | 0.04 | 13.19 | 0.01 | 2.195 | 8.46 | 0.00 | 6.1 | 93.9 | 0.0 | 1.88 | 0.59 | 0.80 | 3.01 | 3.2 | 0.004 | 0.58 | 0.0 | 0.04 | 15.64 | 0.01 | 2.188 | 8.24 | 0.86 | 5.3 | 94.7 | 0.0 | 2.59 | 0.26 | 0.54 | 0.80 | 2.60 | 2199 | 264 | 1 | 0 | 7 | 2 | 0 | logfile |
✔ | 7WiJ | 32531 | 2022-12-12 | 2022-01-03 | 3.17 | 3.08 | 3.01 | 3.2 | 0.002 | 0.50 | 0.0 | 0.03 | 14.49 | 0.00 | 2.243 | 4.92 | 0.00 | 0.4 | 99.6 | 0.0 | 2.75 | 0.70 | 0.85 | 1.82 | 3.2 | 0.004 | 0.56 | 0.0 | 0.04 | 15.62 | 0.00 | 2.266 | 4.80 | 0.08 | 1.0 | 99.0 | 0.0 | 3.19 | 0.26 | 0.71 | 0.88 | 1.96 | 12396 | 1602 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DiM | 27440 | 2022-12-16 | 2022-06-29 | 2.62 | 3.22 | 2.95 | 3.2 | 0.003 | 0.52 | 0.0 | 0.04 | 16.05 | 0.00 | 2.196 | 3.93 | 3.52 | 2.1 | 97.6 | 0.3 | 0.32 | 0.71 | 0.84 | 3.85 | 3.2 | 0.005 | 0.61 | 0.0 | 0.05 | 16.49 | 0.00 | 2.097 | 3.66 | 5.48 | 3.0 | 96.8 | 0.1 | 0.25 | 0.26 | 0.69 | 0.87 | 4.00 | 16745 | 2139 | 18 | 0 | 18 | 18 | 0 | logfile |
✔ | 8AE1 | 15378 | 2022-12-14 | 2022-07-12 | 3.25 | 3.42 | 3.19 | 3.3 | 0.002 | 0.47 | 0.0 | 0.04 | 12.79 | 0.00 | 2.165 | 3.58 | 0.00 | 2.7 | 97.3 | 0.0 | -1.01 | 0.77 | 0.87 | 4.39 | 3.3 | 0.004 | 0.56 | 0.0 | 0.05 | 14.06 | 0.00 | 2.163 | 4.08 | 0.14 | 3.6 | 96.4 | 0.0 | -0.50 | 0.27 | 0.77 | 0.89 | 3.70 | 21504 | 2859 | 6 | 0 | 18 | 0 | 0 | logfile |