Table showing results for May 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	6ZBB	11149	2022-05-14	2020-06-08	3.61	3.81	3.50	3.7	0.008	1.03	0.0	0.04	16.65	0.00	1.960	16.56	0.00	6.1	93.9	0.0	-0.21	0.64	0.79	1.49	3.7	0.004	0.66	0.0	0.04	16.38	0.00	2.012	14.47	0.29	3.0	97.0	0.0	1.12	0.54	0.64	0.78	1.34	20936	1328	20	0	5	0	10446	logfile
✔	6Z1R	11039	2022-05-13	2020-05-14	3.29	3.42	3.09	3.3	0.007	0.71	0.0	0.04	15.06	0.00	1.890	9.25	0.00	6.6	93.4	0.0	-1.25	0.69	0.83	2.88	3.3	0.005	0.57	0.0	0.04	15.90	0.00	1.701	7.54	0.15	4.5	95.5	0.0	0.19	1.54	0.71	0.86	2.45	65754	4278	32	0	11	17	33137	logfile
✔	6ZPo	11342	2022-05-15	2020-07-09	4.0	3.38	—	3.3	0.007	0.81	0.0	0.04	15.51	0.00	1.497	10.49	0.00	6.0	94.0	0.0	-0.81	0.67	0.76	—	3.3	0.003	0.55	0.0	0.04	16.14	0.00	1.755	8.02	0.17	3.9	96.1	0.0	0.41	1.12	0.67	0.75	—	80353	5150	42	0	16	17	40405	logfile
✔	6KPH	0746	2022-05-13	2019-08-15	2.41	3.45	—	3.2	0.014	1.01	0.0	0.15	14.01	0.00	1.838	8.27	0.00	8.5	91.5	0.0	-4.25	0.81	0.85	4.19	3.2	0.004	0.73	0.0	0.15	15.62	0.00	1.777	7.89	1.06	4.1	95.9	0.0	0.19	0.81	0.80	0.86	4.21	62832	3936	24	0	48	0	31212	logfile
✔	6KPE	0743	2022-05-13	2019-08-15	2.83	4.04	—	3.7	0.009	0.82	0.0	0.14	13.07	0.00	2.040	13.53	0.00	10.4	89.6	0.0	-5.24	0.83	0.84	3.18	3.5	0.004	0.83	0.0	0.16	15.55	0.00	2.043	10.01	1.34	6.0	94.0	0.0	-0.31	1.70	0.83	0.85	3.26	62184	3936	24	0	12	0	31212	logfile
✔	6ZiQ	11228	2022-05-14	2020-06-26	4.33	3.58	4.02	3.4	0.005	0.73	0.0	0.08	14.67	0.00	1.911	19.90	0.00	8.6	91.4	0.0	-1.50	0.48	0.72	—	3.4	0.003	0.63	0.0	0.08	14.77	0.00	1.941	13.40	0.08	5.8	94.2	0.0	0.44	0.59	0.47	0.72	—	22255	1385	15	0	0	0	11316	logfile
✔	6Uo8	20822	2022-05-13	2019-10-14	3.63	3.97	—	3.8	0.004	0.73	0.0	0.05	13.47	0.01	2.290	4.07	0.00	7.8	92.2	0.0	-3.75	0.76	0.83	2.87	3.8	0.004	0.68	0.0	0.05	15.37	0.00	2.208	8.32	0.27	7.3	92.7	0.0	-0.93	1.26	0.77	0.83	2.85	10958	1385	7	0	15	0	0	logfile
✘	6KPJ	0748	2022-05-13	2019-08-15	2.56	3.82	—	3.3	0.014	0.91	0.0	0.06	13.08	0.00	1.218	8.38	0.00	6.7	93.3	0.0	-4.33	0.85	0.86	3.83	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	62845	3936	24	0	48	0	31225	logfile
✔	6KPi	0747	2022-05-13	2019-08-15	2.43	3.50	—	3.0	0.008	0.67	0.0	0.06	11.99	0.00	1.974	5.19	0.00	7.1	92.9	0.0	-4.39	0.85	0.88	4.58	3.0	0.005	0.78	2.0	0.13	14.39	0.00	1.984	5.77	0.62	3.5	96.5	0.0	1.23	0.72	0.85	0.90	4.27	62209	3936	24	0	24	0	31225	logfile
✔	6KPA	0742	2022-05-13	2019-08-15	2.75	3.85	—	3.3	0.015	0.92	0.0	0.06	14.43	0.00	1.899	6.66	0.00	6.7	93.3	0.0	-4.52	0.87	0.88	3.48	3.3	0.005	0.80	1.0	0.13	16.02	0.00	1.851	5.41	0.19	3.7	96.3	0.0	0.59	0.83	0.87	0.90	3.36	62845	3936	24	0	48	0	31225	logfile
✔	6LMT	0919	2022-05-14	2019-12-26	2.66	2.77	2.50	2.7	0.012	1.14	0.0	0.06	11.63	0.01	2.409	4.14	0.00	2.4	97.6	0.0	-4.48	0.52	0.75	5.03	2.7	0.003	0.67	0.0	0.04	16.17	0.00	2.262	10.09	1.45	1.6	98.4	0.0	2.29	0.56	0.70	0.88	3.49	17552	2032	16	0	32	0	0	logfile
✔	6KQ8	0751	2022-05-13	2019-08-16	3.0	4.05	—	3.7	0.004	0.68	3.0	0.13	12.41	0.00	2.049	6.27	0.00	4.3	95.7	0.0	-4.72	0.87	0.86	3.55	3.7	0.005	0.76	2.0	0.13	13.89	0.00	2.051	7.78	0.34	5.2	94.8	0.0	0.07	1.38	0.87	0.87	3.92	62197	3936	24	0	12	0	31225	logfile
✔	6KoU	0740	2022-05-13	2019-08-13	2.43	3.57	—	3.0	0.004	0.67	1.0	0.13	11.88	0.00	2.006	4.07	0.00	3.0	97.0	0.0	-4.12	0.85	0.88	4.03	3.1	0.004	0.74	2.0	0.13	13.97	0.00	2.071	6.52	0.28	4.0	96.0	0.0	0.82	1.07	0.85	0.89	3.83	62209	3936	24	0	24	0	31225	logfile
✔	6RRS	4989	2022-05-16	2019-05-20	3.9	4.30	4.41	3.8	0.013	2.10	0.0	0.00	2.04	0.01	2.364	0.79	0.00	3.9	95.3	0.8	-0.85	0.56	0.64	—	3.8	0.004	0.88	0.0	0.00	7.55	0.00	2.175	1.89	0.00	14.6	85.4	0.0	-1.44	2.05	0.80	0.71	—	93060	23220	180	0	0	0	0	logfile
✔	6MRD	9196	2022-05-16	2018-10-12	3.82	4.44	—	3.9	0.008	0.88	0.0	0.07	10.50	0.00	1.941	43.72	0.00	9.7	90.1	0.2	-2.91	0.90	0.86	1.24	3.9	0.006	0.74	1.0	0.07	11.48	0.00	1.717	64.75	0.17	10.0	89.9	0.1	-0.02	0.53	0.90	0.87	1.11	34517	4396	21	0	14	0	1477	logfile
✔	6VFK	21185	2022-05-17	2020-01-05	4.25	4.39	4.20	4.3	0.021	1.41	0.0	0.09	10.30	0.01	2.389	0.89	0.00	1.3	98.7	0.0	2.59	0.84	0.81	—	4.2	0.003	0.57	0.0	0.04	13.24	0.00	2.187	9.56	0.00	1.8	98.0	0.2	3.96	1.03	0.84	0.84	—	37032	4764	24	0	0	0	0	logfile
✔	6W6W	21567	2022-05-13	2020-03-17	3.0	3.23	—	3.1	0.006	0.99	1.0	0.06	14.87	0.01	2.303	2.74	0.00	12.1	87.6	0.3	-5.09	0.64	0.84	3.49	3.1	0.004	0.75	0.0	0.04	16.42	0.00	2.208	7.30	1.68	10.8	89.1	0.1	-2.57	1.19	0.65	0.86	3.11	10981	1388	6	4	1	0	0	logfile
✘	6VL6	21231	2022-05-14	2020-01-22	4.6	5.00	4.54	4.6	0.019	1.46	0.0	0.09	11.38	0.01	2.431	0.59	0.00	0.9	99.1	0.0	0.45	0.87	0.83	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	21504	2640	24	0	0	0	0	logfile
✔	6ZRQ	11382	2022-05-12	2020-07-14	3.9	4.06	—	4.2	0.014	1.20	0.0	0.05	12.20	0.00	2.597	20.13	0.00	5.0	95.0	0.0	-4.20	0.64	0.62	3.62	4.2	0.003	0.70	0.0	0.04	12.79	0.00	2.180	20.13	0.00	15.4	84.6	0.0	-5.93	2.13	0.70	0.77	2.95	3816	276	12	0	0	0	1776	logfile
✔	6PM6	20389	2022-05-13	2019-07-01	2.9	3.37	—	3.4	0.004	0.89	0.0	0.05	10.24	0.01	2.335	5.30	0.00	4.9	95.1	0.0	-4.86	0.54	0.80	4.25	3.4	0.004	0.77	0.0	0.05	15.86	0.01	2.195	9.58	2.57	5.3	94.7	0.1	-0.86	0.74	0.52	0.80	3.69	14100	1735	15	0	15	0	0	logfile

• ← previous
• Page 3 of 376
• next →