The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6CVM | 7770 | 2022-12-19 | 2018-03-28 | 1.9 | 2.49 | 1.94 | 2.3 | 0.012 | 0.92 | 0.0 | 0.07 | 10.17 | 0.01 | 2.053 | 4.13 | 0.00 | 2.7 | 97.3 | 0.0 | -1.16 | 0.81 | 0.91 | 7.66 | 2.3 | 0.005 | 0.63 | 0.0 | 0.05 | 13.84 | 0.00 | 1.973 | 7.13 | 0.69 | 2.2 | 97.8 | 0.0 | 0.70 | 0.37 | 0.85 | 0.94 | 6.94 | 37062 | 4084 | 12 | 0 | 20 | 4194 | 0 | logfile |
✔ | 5TCP | 8398 | 2022-12-14 | 2016-09-15 | 4.3 | 3.93 | — | 4.0 | 0.013 | 1.38 | 0.0 | 0.07 | 9.90 | 0.01 | 2.479 | 1.03 | 0.00 | 3.5 | 95.5 | 1.1 | -0.87 | 0.77 | 0.79 | — | 3.9 | 0.003 | 0.58 | 0.0 | 0.04 | 12.65 | 0.00 | 2.205 | 6.61 | 0.00 | 3.3 | 96.5 | 0.3 | 1.91 | 0.86 | 0.80 | 0.84 | — | 72888 | 9072 | 48 | 0 | 0 | 0 | 0 | logfile |
✔ | 6MB3 | 9065 | 2022-12-13 | 2018-08-29 | 3.37 | 3.47 | — | 3.4 | 0.020 | 1.75 | 0.0 | 0.09 | 9.45 | 0.01 | 2.273 | 0.34 | 0.00 | 3.7 | 96.1 | 0.1 | 0.34 | 0.73 | 0.86 | 4.52 | 3.4 | 0.003 | 0.68 | 0.0 | 0.04 | 14.06 | 0.00 | 2.187 | 7.60 | 0.12 | 5.6 | 94.3 | 0.0 | -0.18 | 1.27 | 0.74 | 0.87 | 3.73 | 16423 | 2178 | 19 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N1R | 9318 | 2022-12-21 | 2018-11-10 | 4.0 | 4.12 | — | 4.0 | 0.006 | 0.89 | 0.0 | 0.05 | 8.46 | 0.01 | 0.296 | 17.83 | 0.00 | 8.7 | 91.3 | 0.0 | -2.90 | 0.80 | 0.71 | — | 4.0 | 0.004 | 0.76 | 0.0 | 0.05 | 12.80 | 0.00 | 2.118 | 17.37 | 0.48 | 7.1 | 92.9 | 0.0 | 0.31 | 1.68 | 0.83 | 0.78 | — | 46044 | 5796 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PBX | 20294 | 2022-12-14 | 2019-06-14 | 4.0 | 4.12 | — | 4.0 | 0.006 | 0.83 | 0.0 | 0.05 | 14.04 | 0.01 | 2.264 | 6.12 | 0.00 | 3.8 | 96.2 | 0.0 | -3.07 | 0.68 | 0.67 | — | 4.0 | 0.003 | 0.70 | 0.0 | 0.04 | 15.25 | 0.00 | 2.136 | 14.36 | 0.05 | 4.2 | 95.8 | 0.0 | 1.48 | 0.72 | 0.73 | 0.78 | — | 23028 | 3152 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 6CNM | 7537 | 2022-12-12 | 2018-03-08 | 3.4 | 3.51 | — | 3.5 | 0.009 | 1.03 | 0.0 | 0.05 | 10.36 | 0.01 | 2.331 | 1.63 | 0.00 | 4.3 | 95.7 | 0.0 | -4.29 | 0.64 | 0.84 | 3.41 | 3.5 | 0.003 | 0.52 | 0.0 | 0.04 | 13.57 | 0.00 | 2.190 | 3.88 | 0.19 | 3.0 | 97.0 | 0.0 | 2.21 | 0.55 | 0.63 | 0.85 | 2.33 | 12541 | 1700 | 12 | 0 | 17 | 0 | 0 | logfile |
✔ | 6T72 | 10389 | 2022-12-15 | 2019-10-21 | 3.7 | 3.79 | — | 3.8 | 0.013 | 1.64 | 0.0 | 0.11 | 14.69 | 0.02 | 2.167 | 4.27 | 0.00 | 2.1 | 97.9 | 0.0 | -2.53 | 0.76 | 0.87 | 2.40 | 3.7 | 0.002 | 0.53 | 0.0 | 0.03 | 14.78 | 0.00 | 2.127 | 3.35 | 0.30 | 2.0 | 98.0 | 0.0 | 1.81 | 1.24 | 0.77 | 0.87 | 1.64 | 26278 | 3388 | 42 | 0 | 210 | 0 | 0 | logfile |
✔ | 6F0K | 4165 | 2022-12-20 | 2017-11-20 | 3.87 | 3.98 | — | 3.9 | 0.022 | 1.29 | 0.0 | 0.14 | 11.89 | 0.01 | 1.943 | 10.92 | 0.00 | 14.2 | 85.8 | 0.0 | -5.22 | 0.65 | 0.72 | 1.34 | 3.9 | 0.004 | 0.94 | 0.0 | 0.08 | 15.27 | 0.01 | 1.842 | 20.44 | 0.53 | 12.6 | 87.4 | 0.0 | -3.17 | 1.48 | 0.66 | 0.74 | 1.32 | 39868 | 2504 | 10 | 0 | 10 | 0 | 19577 | logfile |
✔ | 6E7C | 8998 | 2022-12-11 | 2018-07-25 | 3.65 | 3.83 | 3.42 | 3.8 | 0.007 | 0.85 | 0.0 | 0.04 | 12.40 | 0.00 | 1.901 | 7.88 | 0.00 | 6.8 | 93.2 | 0.0 | -4.32 | 0.50 | 0.75 | 3.05 | 3.8 | 0.005 | 0.78 | 0.0 | 0.05 | 15.93 | 0.00 | 1.916 | 20.19 | 0.68 | 5.3 | 94.7 | 0.0 | -2.25 | 0.94 | 0.51 | 0.78 | 2.78 | 6780 | 854 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 6SP2 | 10279 | 2022-12-14 | 2019-08-30 | 3.33 | 3.92 | 3.50 | 3.8 | 0.006 | 0.85 | 0.0 | 0.05 | 15.17 | 0.00 | 1.590 | 8.11 | 0.00 | 4.7 | 95.3 | 0.0 | -0.56 | 0.49 | 0.67 | 2.32 | 3.8 | 0.003 | 0.66 | 0.0 | 0.04 | 14.85 | 0.00 | 2.207 | 5.66 | 0.21 | 3.8 | 96.2 | 0.0 | 2.75 | 1.49 | 0.63 | 0.80 | 1.58 | 18498 | 2190 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 6CNN | 7538 | 2022-12-13 | 2018-03-08 | 3.5 | 3.63 | — | 3.6 | 0.008 | 1.00 | 0.0 | 0.05 | 10.13 | 0.01 | 2.016 | 1.37 | 0.00 | 4.0 | 96.0 | 0.0 | -4.29 | 0.66 | 0.83 | 2.52 | 3.6 | 0.004 | 0.62 | 0.0 | 0.04 | 15.09 | 0.00 | 2.177 | 4.78 | 0.66 | 2.2 | 97.8 | 0.0 | 2.39 | 0.75 | 0.66 | 0.83 | 1.89 | 15740 | 2024 | 16 | 0 | 28 | 0 | 0 | logfile |
✔ | 6E7Y | 9001 | 2022-12-13 | 2018-07-27 | 3.57 | 3.68 | — | 3.7 | 0.005 | 0.81 | 0.0 | 0.05 | 10.18 | 0.01 | 2.364 | 2.19 | 0.00 | 7.1 | 92.9 | 0.0 | -5.91 | 0.63 | 0.80 | 2.96 | 3.7 | 0.002 | 0.68 | 0.0 | 0.04 | 14.29 | 0.00 | 2.317 | 6.14 | 0.47 | 4.8 | 95.2 | 0.0 | -0.54 | 1.34 | 0.63 | 0.82 | 2.62 | 15508 | 1900 | 8 | 0 | 4 | 0 | 0 | logfile |
✘ | 6Q2R | 20578 | 2022-12-18 | 2019-08-08 | 4.3 | 4.92 | — | 4.6 | 0.004 | 0.81 | 0.0 | 0.05 | 8.41 | 0.01 | 1.384 | 4.93 | 0.00 | 5.4 | 94.6 | 0.0 | -3.85 | 0.68 | 0.53 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 30392 | 3800 | 16 | 0 | 40 | 0 | 0 | logfile |
✔ | 6H05 | 0108 | 2022-12-21 | 2018-07-06 | 2.9 | 3.15 | — | 3.5 | 0.016 | 1.09 | 0.0 | 0.07 | 9.74 | 0.01 | 0.426 | 17.81 | 0.00 | 8.5 | 91.5 | 0.0 | -5.50 | 0.36 | 0.13 | 0.50 | 3.1 | 0.003 | 0.86 | 0.0 | 0.04 | 15.56 | 0.00 | 2.134 | 15.94 | 2.28 | 4.3 | 95.7 | 0.0 | -1.34 | 1.63 | 0.58 | 0.47 | 0.65 | 44544 | 5664 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6GC6 | 4381 | 2022-12-12 | 2018-04-17 | 4.3 | 5.02 | — | 4.5 | 0.003 | 0.66 | 0.0 | 0.03 | 12.88 | 0.00 | 2.229 | 5.32 | 0.00 | 6.0 | 93.9 | 0.1 | -3.94 | 0.74 | 0.57 | — | 4.5 | 0.009 | 0.73 | 0.0 | 0.04 | 15.64 | 0.00 | 1.990 | 29.10 | 0.00 | 9.6 | 90.4 | 0.0 | -2.05 | 2.14 | 0.91 | 0.86 | — | 61404 | 2118 | 19 | 2092 | 0 | 0 | 0 | logfile |
✔ | 6oR5 | 9032 | 2022-12-12 | 2019-04-29 | 4.0 | 4.23 | — | 3.9 | 0.008 | 1.12 | 0.0 | 0.05 | 10.85 | 0.00 | 2.245 | 4.84 | 0.00 | 17.3 | 82.4 | 0.3 | -5.53 | 0.76 | 0.79 | — | 3.9 | 0.002 | 0.56 | 0.0 | 0.04 | 7.06 | 0.00 | 2.221 | 3.09 | 0.00 | 12.5 | 87.5 | 0.0 | -0.20 | 1.35 | 0.78 | 0.79 | — | 10364 | 2058 | 1 | 0 | 5 | 0 | 0 | logfile |
✔ | 6CoZ | 7545 | 2022-12-11 | 2018-03-13 | 3.36 | 4.78 | — | 4.7 | 0.009 | 1.71 | 0.0 | 0.07 | 5.63 | 0.01 | 2.541 | 0.00 | 0.00 | 3.2 | 96.2 | 0.6 | -2.49 | 0.78 | 0.68 | — | 4.4 | 0.003 | 0.82 | 0.0 | 0.04 | 4.96 | 0.00 | 2.368 | 4.42 | 0.00 | 8.3 | 91.7 | 0.0 | -1.63 | 1.58 | 0.82 | 0.77 | — | 1586 | 320 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6G9o | 4367 | 2022-12-19 | 2018-04-11 | 4.25 | 4.47 | — | 4.2 | 0.007 | 0.84 | 0.0 | 0.05 | 8.43 | 0.01 | 2.233 | 1.42 | 0.00 | 4.0 | 96.0 | 0.0 | -2.09 | 0.74 | 0.81 | — | 4.2 | 0.002 | 0.58 | 0.0 | 0.04 | 10.97 | 0.00 | 2.219 | 9.47 | 0.00 | 3.7 | 96.3 | 0.0 | -0.15 | 1.31 | 0.74 | 0.83 | — | 35532 | 4308 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6P7M | 20266 | 2022-12-14 | 2019-06-06 | 3.0 | 3.31 | 3.09 | 3.3 | 0.006 | 0.63 | 0.0 | 0.05 | 14.13 | 0.00 | 2.043 | 8.02 | 0.00 | 5.6 | 94.4 | 0.0 | -3.37 | 0.72 | 0.84 | 3.74 | 3.3 | 0.004 | 0.58 | 0.0 | 0.04 | 16.14 | 0.00 | 2.025 | 8.57 | 1.23 | 4.4 | 95.6 | 0.0 | -0.19 | 0.99 | 0.72 | 0.83 | 3.09 | 10141 | 1168 | 4 | 26 | 2 | 0 | 0 | logfile |
✔ | 6UQK | 20849 | 2022-12-22 | 2019-10-20 | 3.77 | 4.46 | 4.11 | 4.3 | 0.003 | 0.53 | 0.0 | 0.04 | 9.91 | 0.00 | 2.196 | 0.22 | 0.00 | 5.0 | 95.0 | 0.0 | -1.84 | 0.74 | 0.78 | 1.71 | 4.3 | 0.003 | 0.60 | 0.0 | 0.04 | 12.63 | 0.00 | 2.251 | 4.46 | 0.41 | 7.5 | 92.5 | 0.0 | 1.15 | 0.61 | 0.75 | 0.81 | 1.93 | 51567 | 8032 | 8 | 0 | 188 | 0 | 0 | logfile |