Table showing results for December 2021

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	7E0J	30934	2021-12-01	2021-01-28	3.13	2.94	—	3.1	0.006	1.35	0.0	0.06	18.34	0.02	1.214	7.02	0.97	5.0	95.0	0.0	-2.78	0.59	0.81	2.44	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8140	672	6	0	56	0	0	logfile
✘	7CoY	30420	2021-12-01	2020-08-05	2.5	2.41	2.54	2.5	0.017	1.68	5.0	0.10	14.30	0.01	1.106	11.55	0.90	5.6	94.3	0.1	-3.23	0.57	0.80	3.51	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	57966	6096	66	0	279	84	0	logfile
✘	7ARL	11886	2021-12-01	2020-10-25	3.2	3.44	—	3.5	0.003	0.70	0.0	0.05	13.12	0.00	2.378	3.27	0.00	4.6	95.4	0.0	-5.83	0.62	0.73	0.86	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9467	1256	9	0	6	0	0	logfile
✘	7ARH	11882	2021-12-01	2020-10-25	3.3	3.57	—	3.5	0.003	0.70	0.0	0.05	12.25	0.00	2.324	2.92	0.20	3.5	96.5	0.0	-5.69	0.70	0.75	0.94	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9649	1261	7	0	2	0	0	logfile
✘	7C1D	30269	2021-12-01	2020-05-03	3.8	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	-6.46	—	—	3.47	6.5	0.004	0.69	0.0	0.05	14.90	0.00	2.239	18.63	0.52	24.5	75.5	0.0	-4.57	—	0.39	0.75	2.42	2034	306	6	0	0	0	0	logfile
✘	7M4U	23666	2021-12-01	2021-03-22	2.71	1.78	—	1.6	0.003	0.54	2.0	0.04	14.67	0.00	1.182	4.42	0.20	3.1	96.7	0.2	1.08	0.79	0.76	3.70	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	51764	2386	27	1528	84	191	0	logfile
✘	7oJH	12951	2021-12-01	2021-05-15	3.1	2.57	4.81	20.0	0.011	0.90	0.0	0.05	11.01	0.00	2.239	2.98	0.52	2.9	97.1	0.0	0.37	0.00	0.00	-0.81	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8999	1138	4	0	5	0	0	logfile
✘	7CUB	30471	2021-12-01	2020-08-22	2.55	2.79	—	2.7	0.008	0.85	0.0	0.05	14.60	0.01	1.245	4.03	4.63	3.8	95.9	0.3	-3.84	0.73	0.89	4.60	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9842	1199	7	0	9	13	0	logfile
✘	6ZZY	11589	2021-12-01	2020-08-05	3.16	2.16	—	2.5	0.025	2.79	0.0	0.18	22.41	0.02	1.183	12.85	0.03	6.1	93.7	0.2	-0.33	0.57	0.76	3.32	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	54609	4594	44	0	379	0	0	logfile
✘	7PHP	13424	2021-12-01	2021-08-18	3.47	3.48	—	3.6	0.017	0.90	0.0	0.05	14.25	0.01	2.182	6.55	0.11	7.0	93.0	0.0	-1.50	0.72	0.83	3.15	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8647	1134	8	0	0	21	0	logfile
✘	7PiJ	13438	2021-12-01	2021-08-20	3.47	4.14	—	4.1	0.015	1.17	0.0	0.05	13.54	0.01	1.166	13.45	0.11	10.6	89.3	0.1	-3.26	0.49	0.51	1.77	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8194	1068	8	0	0	16	0	logfile
✘	7RX5	24725	2021-12-01	2021-08-21	3.4	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9348	1189	41	0	0	0	0	logfile
✘	7RJE	24486	2021-12-01	2021-07-20	3.3	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	57232	3818	24	0	10	0	27924	logfile
✘	7NKZ	12451	2021-12-01	2021-02-19	2.5	2.68	2.48	2.6	0.006	0.73	1.0	0.04	13.30	0.00	1.216	11.51	0.63	1.1	98.9	0.0	0.48	0.70	0.88	4.03	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6424	792	4	0	5	42	0	logfile
✘	6ZRF	11380	2021-12-01	2020-07-13	3.6	3.66	1.96	3.6	0.014	1.03	0.0	0.05	13.43	0.00	1.993	42.14	0.00	4.9	95.1	0.0	-6.22	0.67	0.79	1.84	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	2220	300	12	0	0	0	0	logfile
✘	7N77	24222	2021-12-01	2021-06-09	3.2	4.05	3.31	3.7	0.006	0.80	0.0	0.06	12.82	0.01	1.692	9.63	0.14	3.5	96.5	0.0	-1.56	0.64	0.74	1.92	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7470	1036	1	0	4	2	0	logfile
✘	6YV1	10940	2021-12-01	2020-04-27	3.4	4.09	3.01	3.7	0.002	0.58	0.0	0.04	12.66	0.00	2.272	8.02	1.85	1.0	99.0	0.0	-4.45	0.52	0.77	1.48	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	2496	328	1	0	0	0	0	logfile
✘	7S8N	24898	2021-12-01	2021-09-18	2.9	2.20	2.92	2.1	0.013	0.95	0.0	0.06	13.12	0.01	2.202	4.10	0.00	5.1	94.9	0.0	-0.33	0.79	0.80	3.96	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8154	1090	6	0	1	0	0	logfile
✘	6E3Y	8978	2021-12-01	2018-07-16	3.3	4.08	—	3.7	0.007	1.00	0.0	0.06	9.69	0.01	2.282	4.51	0.00	2.6	97.4	0.0	-3.02	0.78	0.81	2.06	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9434	1194	7	0	1	0	0	logfile
✘	6VHL	21207	2021-12-01	2020-01-10	3.3	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	-6.30	—	—	3.54	3.7	0.004	0.78	0.0	0.04	16.88	0.01	2.268	9.54	0.00	11.3	88.7	0.0	-3.65	—	0.28	0.69	3.54	1190	158	4	0	0	0	0	logfile

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