Table showing results for July 2022

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	7oH4	12893	2022-07-03	2021-05-09	3.0	3.58	3.12	3.4	0.002	0.45	0.0	0.04	10.02	0.00	1.183	6.50	1.36	4.0	96.0	0.0	-3.11	0.64	0.70	2.09	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	11535	1414	8	0	11	3	0	logfile
✘	7E9G	31031	2022-07-05	2021-03-04	3.5	2.34	—	1.9	0.002	0.44	0.0	0.04	11.55	0.00	1.219	8.36	0.00	4.0	96.0	0.0	-3.14	0.70	0.66	1.29	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18816	2557	10	0	3	0	0	logfile
✘	7oDS	12846	2022-07-03	2021-04-30	3.1	3.32	—	3.1	0.002	0.40	0.0	0.03	11.11	0.00	1.207	5.15	0.51	1.2	98.8	0.0	0.91	0.78	0.76	2.42	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	108339	9371	67	1487	132	0	0	logfile
✘	6WQH	21870	2022-07-05	2020-04-28	3.6	4.01	—	3.9	0.013	0.93	2.0	0.05	15.19	0.01	1.208	22.42	0.56	8.0	91.9	0.2	-4.12	0.75	0.83	1.98	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	25471	3223	13	0	22	0	0	logfile
✘	7oDT	12847	2022-07-03	2021-04-30	3.1	3.31	—	3.1	0.002	0.40	0.0	0.03	10.95	0.00	1.207	5.39	0.53	1.2	98.8	0.0	1.05	0.77	0.79	2.84	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	110473	9585	71	1526	110	0	0	logfile
✘	7M3J	23655	2022-07-03	2021-03-18	4.1	3.93	—	3.9	0.010	1.08	3.0	0.07	11.56	0.01	1.133	2.71	0.12	5.8	94.2	0.0	-2.70	0.82	0.82	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	11001	1562	5	0	11	0	0	logfile
✘	7DWQ	30882	2022-07-04	2021-01-17	3.3	3.86	—	3.7	0.021	1.24	0.0	0.06	19.97	0.01	1.204	14.61	0.00	4.2	95.8	0.0	0.78	0.64	0.80	2.40	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	19961	1943	18	0	100	0	0	logfile
✘	7oF2	12867	2022-07-06	2021-05-04	2.7	3.20	2.66	2.9	0.003	0.53	0.0	0.04	14.70	0.00	1.237	4.41	0.01	3.1	96.9	0.0	1.20	0.89	0.89	3.76	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	101195	8560	64	1466	91	0	0	logfile
✘	7PPo	13583	2022-07-03	2021-09-14	2.91	3.10	—	3.0	0.006	0.59	0.0	0.04	12.37	0.00	1.212	7.90	3.41	5.6	94.4	0.0	-2.62	0.81	0.84	3.91	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10990	1383	5	0	2	0	0	logfile
✘	7EDA	31062	2022-07-05	2021-03-15	2.78	2.14	2.78	2.1	0.019	1.96	0.0	0.07	17.43	0.02	1.308	9.52	0.47	3.4	96.6	0.0	-4.11	0.67	0.76	4.32	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	22843	2567	32	0	67	16	0	logfile
✘	7N33	24137	2022-07-04	2021-05-31	2.5	2.72	—	2.6	0.005	0.56	0.0	0.05	13.04	0.00	1.217	4.10	2.93	2.6	97.4	0.0	0.50	0.82	0.87	5.52	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	16524	2076	12	12	0	0	0	logfile
✘	6XLH	22244	2022-07-04	2020-06-28	2.83	2.93	—	2.9	0.001	0.39	0.0	0.04	7.54	0.00	2.093	5.99	0.13	1.5	98.5	0.0	-3.84	0.73	0.80	3.26	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13608	1675	6	0	6	0	0	logfile
✘	7oH5	12894	2022-07-03	2021-05-09	2.9	3.43	2.96	3.3	0.005	0.99	0.0	0.04	9.71	0.00	1.185	5.09	1.19	4.6	95.4	0.0	-4.15	0.65	0.75	3.22	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	11603	1419	8	0	14	2	0	logfile
✘	7MiY	23868	2022-07-05	2021-04-18	3.1	3.21	—	3.2	0.004	0.82	1.0	0.06	15.73	0.00	1.216	9.82	1.31	4.9	95.0	0.2	-0.06	0.57	0.82	2.13	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	21483	2598	10	0	28	0	0	logfile
✘	7MKo	23901	2022-07-05	2021-04-26	3.15	3.25	—	3.2	0.007	1.05	2.0	0.06	16.89	0.01	1.275	21.61	1.22	7.9	91.6	0.5	-2.39	0.71	0.77	1.76	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	26269	3194	9	62	4	0	0	logfile
✘	7NYX	12657	2022-07-04	2021-03-23	4.6	7.95	4.57	3.3	0.003	0.60	0.0	0.04	17.25	0.00	1.228	11.25	0.00	3.4	96.6	0.0	1.74	0.88	0.79	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	70784	4186	18	104	6	0	34688	logfile
✘	7P1H	13159	2022-07-04	2021-07-01	3.9	4.12	—	3.9	0.005	1.01	0.0	0.05	14.14	0.01	2.016	12.45	0.00	5.7	94.3	0.0	-1.60	0.81	0.60	0.33	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13957	898	4	0	2	0	6917	logfile
✘	7AFN	11771	2022-07-04	2020-09-19	3.86	5.27	3.89	3.0	0.008	1.02	3.0	0.07	17.77	0.01	1.755	23.16	0.00	6.9	93.1	0.0	-1.93	0.90	0.83	0.72	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18520	1108	11	456	12	0	0	logfile
✘	7AF5	11753	2022-07-04	2020-09-19	2.96	3.21	2.95	2.9	0.007	0.74	2.0	0.05	14.80	0.00	1.876	10.32	0.00	4.6	95.4	0.0	-1.98	0.85	0.87	2.87	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	18531	1104	11	456	53	0	0	logfile
✘	7Boi	12244	2022-07-07	2021-01-25	2.98	3.76	2.97	2.9	0.007	0.72	3.0	0.05	14.40	0.00	1.227	16.40	0.00	3.6	96.4	0.0	-1.74	0.89	0.91	1.58	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	35970	1617	16	1078	74	0	0	logfile

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