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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8DP1 | 27628 | 2023-08-18 | 2022-07-14 | 3.46 | 4.08 | 3.46 | 3.5 | 0.014 | 1.85 | 9.0 | 0.12 | 14.13 | 0.02 | 2.519 | 0.08 | 1.61 | 4.4 | 95.0 | 0.6 | -0.92 | 0.84 | 0.83 | 3.01 | 3.5 | 0.003 | 0.64 | 0.0 | 0.04 | 14.71 | 0.00 | 2.155 | 7.03 | 0.04 | 2.8 | 97.1 | 0.0 | -0.06 | 1.26 | 0.85 | 0.86 | 2.32 | 25000 | 3045 | 33 | 0 | 95 | 0 | 0 | logfile |
✔ | 7KDL | 22826 | 2023-08-17 | 2020-10-08 | 2.96 | 3.49 | — | 3.4 | 0.014 | 1.76 | 2.0 | 0.10 | 12.45 | 0.01 | 1.479 | 0.09 | 0.27 | 6.1 | 93.6 | 0.3 | -0.99 | 0.78 | 0.78 | 3.84 | 3.4 | 0.004 | 0.65 | 0.0 | 0.04 | 14.54 | 0.00 | 2.092 | 7.03 | 1.68 | 3.6 | 96.4 | 0.0 | 0.06 | 1.22 | 0.79 | 0.83 | 3.26 | 22365 | 2875 | 18 | 0 | 59 | 0 | 0 | logfile |
✔ | 7LWW | 23559 | 2023-08-17 | 2021-03-01 | 3.0 | 3.20 | — | 3.2 | 0.014 | 1.78 | 5.0 | 0.10 | 12.77 | 0.01 | 2.511 | 0.09 | 0.55 | 5.3 | 94.4 | 0.3 | -0.82 | 0.75 | 0.84 | 3.87 | 3.2 | 0.004 | 0.63 | 0.0 | 0.04 | 15.05 | 0.00 | 2.161 | 5.91 | 1.81 | 3.2 | 96.8 | 0.0 | 0.52 | 1.24 | 0.79 | 0.87 | 3.11 | 23786 | 2982 | 18 | 0 | 50 | 0 | 0 | logfile |
✔ | 7LYo | 23597 | 2023-08-17 | 2021-03-07 | 3.32 | 3.53 | — | 3.5 | 0.013 | 1.75 | 5.0 | 0.09 | 12.57 | 0.01 | 2.511 | 0.09 | 0.43 | 5.4 | 94.3 | 0.3 | -0.89 | 0.78 | 0.83 | 3.84 | 3.5 | 0.004 | 0.63 | 0.0 | 0.04 | 14.44 | 0.00 | 2.180 | 6.41 | 0.27 | 3.6 | 96.4 | 0.1 | 0.36 | 0.66 | 0.81 | 0.87 | 2.95 | 23649 | 2982 | 6 | 0 | 40 | 0 | 0 | logfile |
✔ | 7LWo | 23552 | 2023-08-17 | 2021-03-01 | 2.85 | 3.02 | — | 3.0 | 0.013 | 1.79 | 6.0 | 0.09 | 12.73 | 0.01 | 2.511 | 0.09 | 0.59 | 4.5 | 95.1 | 0.3 | -0.78 | 0.72 | 0.80 | 3.55 | 3.0 | 0.003 | 0.57 | 0.0 | 0.04 | 15.17 | 0.00 | 2.097 | 4.46 | 1.45 | 2.6 | 97.2 | 0.1 | 0.75 | 0.61 | 0.68 | 0.83 | 3.19 | 23556 | 2980 | 9 | 0 | 36 | 0 | 0 | logfile |
✔ | 7TLA | 25985 | 2023-08-17 | 2022-01-18 | 3.13 | 3.36 | — | 3.3 | 0.012 | 1.76 | 3.0 | 0.09 | 13.37 | 0.01 | 2.522 | 0.09 | 1.12 | 6.0 | 93.7 | 0.3 | -1.09 | 0.58 | 0.61 | 4.05 | 3.3 | 0.007 | 0.68 | 0.0 | 0.05 | 14.83 | 0.00 | 2.073 | 7.18 | 0.23 | 4.4 | 95.6 | 0.0 | -0.02 | 0.65 | 0.76 | 0.85 | 3.33 | 23052 | 2948 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M7B | 23709 | 2023-08-09 | 2021-03-27 | 2.95 | 3.73 | 2.93 | 3.1 | 0.012 | 1.87 | 5.0 | 0.11 | 13.12 | 0.02 | 2.512 | 0.10 | 0.00 | 3.5 | 96.5 | 0.0 | -0.73 | 0.62 | 0.86 | 4.80 | 3.1 | 0.003 | 0.63 | 0.0 | 0.04 | 14.03 | 0.00 | 2.184 | 6.23 | 0.18 | 2.4 | 97.6 | 0.0 | 0.20 | 1.34 | 0.64 | 0.88 | 3.45 | 4898 | 635 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7N95 | 24250 | 2023-08-10 | 2021-06-16 | 4.1 | 3.45 | — | 2.1 | 0.002 | 0.74 | 0.0 | 0.00 | 5.05 | 0.00 | 2.573 | 0.10 | 0.00 | 7.1 | 92.3 | 0.6 | -1.14 | 0.78 | 0.70 | — | 2.1 | 0.004 | 1.01 | 0.0 | 0.00 | 4.97 | 0.00 | 2.503 | 6.53 | 0.00 | 18.1 | 81.7 | 0.2 | -3.27 | 1.81 | 0.85 | 0.83 | — | 7299 | 2433 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QK5 | 14038 | 2023-08-11 | 2021-12-17 | 1.92 | 1.67 | 1.83 | 2.2 | 0.011 | 1.89 | 4.0 | 0.10 | 10.96 | 0.01 | 2.401 | 0.10 | 0.00 | 4.5 | 95.5 | 0.0 | -1.58 | 0.32 | 0.78 | 6.85 | 2.2 | 0.004 | 0.63 | 0.0 | 0.05 | 18.16 | 0.01 | 2.237 | 3.82 | 1.88 | 3.9 | 96.1 | 0.0 | -1.69 | 1.47 | 0.36 | 0.82 | 7.53 | 10485 | 666 | 18 | 0 | 36 | 0 | 5337 | logfile |
✔ | 7LWT | 23556 | 2023-08-17 | 2021-03-01 | 3.19 | 3.41 | — | 3.4 | 0.014 | 1.78 | 1.0 | 0.10 | 12.67 | 0.01 | 2.527 | 0.11 | 0.90 | 5.1 | 94.6 | 0.3 | -0.82 | 0.76 | 0.84 | 3.87 | 3.4 | 0.003 | 0.59 | 0.0 | 0.04 | 14.32 | 0.00 | 2.121 | 4.34 | 0.35 | 2.9 | 97.0 | 0.1 | 0.60 | 1.24 | 0.77 | 0.83 | 3.16 | 23759 | 2980 | 15 | 0 | 48 | 0 | 0 | logfile |
✔ | 7UAE | 26422 | 2023-08-09 | 2022-03-12 | 2.6 | 2.71 | 2.62 | 2.3 | 0.012 | 1.76 | 2.0 | 0.10 | 12.76 | 0.02 | 2.282 | 0.11 | 0.00 | 3.9 | 96.1 | 0.0 | -0.18 | 0.66 | 0.87 | 6.01 | 2.3 | 0.003 | 0.70 | 0.0 | 0.04 | 16.00 | 0.00 | 2.188 | 7.54 | 1.68 | 5.4 | 94.6 | 0.0 | 0.27 | 1.66 | 0.68 | 0.89 | 4.14 | 4513 | 535 | 7 | 0 | 18 | 0 | 0 | logfile |
✘ | 7KE9 | 22835 | 2023-08-17 | 2020-10-10 | 3.08 | 3.62 | — | 3.5 | 0.013 | 1.74 | 0.0 | 0.09 | 12.23 | 0.01 | 2.491 | 0.11 | 0.04 | 5.8 | 94.0 | 0.2 | -0.81 | 0.80 | 0.80 | 4.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22365 | 2875 | 18 | 0 | 59 | 0 | 0 | logfile |
✔ | 7SK6 | 25174 | 2023-08-11 | 2021-10-19 | 4.0 | 4.42 | — | 4.1 | 0.018 | 1.92 | 2.0 | 0.11 | 13.16 | 0.01 | 2.462 | 0.11 | 0.76 | 4.2 | 94.0 | 1.8 | 0.35 | 0.52 | 0.52 | — | 4.1 | 0.003 | 0.58 | 0.0 | 0.04 | 14.77 | 0.00 | 2.131 | 14.34 | 0.19 | 4.2 | 95.8 | 0.0 | 0.54 | 1.46 | 0.64 | 0.71 | — | 9144 | 585 | 4 | 0 | 0 | 0 | 4462 | logfile |
✔ | 7KE8 | 22834 | 2023-08-18 | 2020-10-10 | 3.26 | 3.87 | — | 3.7 | 0.014 | 1.73 | 1.0 | 0.10 | 13.48 | 0.01 | 2.519 | 0.11 | 1.20 | 6.3 | 93.6 | 0.1 | -0.97 | 0.81 | 0.81 | 3.16 | 3.7 | 0.004 | 0.63 | 0.0 | 0.04 | 14.52 | 0.00 | 2.156 | 7.54 | 0.19 | 4.1 | 95.9 | 0.0 | -0.10 | 1.24 | 0.83 | 0.83 | 2.48 | 23994 | 2957 | 21 | 0 | 63 | 0 | 0 | logfile |
✘ | 7TLB | 25986 | 2023-08-17 | 2022-01-18 | 3.06 | 3.26 | — | 3.2 | 0.012 | 1.74 | 1.0 | 0.09 | 13.14 | 0.01 | 2.531 | 0.11 | 0.82 | 5.3 | 94.7 | 0.1 | -1.00 | 0.54 | 0.56 | 2.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 22806 | 2916 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TKM | 25974 | 2023-08-16 | 2022-01-17 | 4.5 | 7.58 | 4.88 | 4.3 | 0.019 | 2.22 | 0.0 | 0.00 | 6.78 | 0.01 | 2.385 | 0.12 | 0.00 | 4.3 | 94.2 | 1.5 | -0.44 | 0.59 | 0.59 | — | 4.3 | 0.004 | 0.82 | 0.0 | 0.00 | 5.62 | 0.00 | 2.105 | 12.83 | 0.00 | 9.6 | 90.0 | 0.3 | -0.78 | 1.55 | 0.82 | 0.81 | — | 20227 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TKP | 25977 | 2023-08-16 | 2022-01-17 | 4.6 | 7.57 | 4.97 | 4.4 | 0.019 | 2.20 | 0.0 | 0.00 | 6.68 | 0.01 | 2.352 | 0.12 | 0.00 | 4.2 | 94.5 | 1.3 | -0.50 | 0.60 | 0.63 | — | 4.4 | 0.004 | 0.83 | 0.0 | 0.00 | 5.67 | 0.00 | 2.069 | 13.64 | 0.00 | 9.3 | 90.5 | 0.2 | -0.09 | 0.76 | 0.78 | 0.81 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TKo | 25976 | 2023-08-16 | 2022-01-17 | 4.8 | 7.71 | 5.39 | 4.4 | 0.019 | 2.23 | 0.0 | 0.00 | 6.74 | 0.01 | 2.314 | 0.12 | 0.00 | 4.8 | 93.9 | 1.4 | -0.54 | 0.62 | 0.65 | — | 4.4 | 0.004 | 0.84 | 0.0 | 0.00 | 5.80 | 0.00 | 2.139 | 12.52 | 0.00 | 10.1 | 89.6 | 0.2 | -0.46 | 0.84 | 0.84 | 0.82 | — | 20229 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KDT | 22829 | 2023-08-10 | 2020-10-09 | 3.05 | 3.34 | 3.19 | 3.4 | 0.012 | 1.74 | 0.0 | 0.09 | 14.56 | 0.02 | 2.562 | 0.12 | 0.47 | 1.4 | 98.6 | 0.0 | -1.64 | 0.70 | 0.77 | 2.95 | 3.3 | 0.003 | 0.52 | 0.0 | 0.03 | 16.94 | 0.00 | 2.204 | 5.58 | 0.70 | 1.8 | 98.2 | 0.0 | 2.89 | 2.12 | 0.65 | 0.78 | 2.42 | 8064 | 505 | 2 | 0 | 0 | 0 | 4042 | logfile |
✔ | 7TJY | 25946 | 2023-08-16 | 2022-01-17 | 3.8 | 4.84 | 3.78 | 3.6 | 0.020 | 2.29 | 0.0 | 0.00 | 6.75 | 0.01 | 2.333 | 0.12 | 0.00 | 4.3 | 94.3 | 1.5 | -0.54 | 0.59 | 0.68 | — | 3.6 | 0.004 | 0.79 | 0.0 | 0.00 | 4.84 | 0.00 | 2.161 | 3.93 | 0.00 | 9.8 | 90.0 | 0.3 | 0.68 | 1.48 | 0.82 | 0.86 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |