The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6H4N | 0137 | 2023-08-30 | 2018-07-22 | 3.0 | 3.20 | — | 3.1 | 0.007 | 0.96 | 4.0 | 0.05 | 14.51 | 0.01 | 0.418 | 5.99 | 0.74 | 10.1 | 89.4 | 0.5 | -4.18 | 0.86 | 0.87 | 3.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 147282 | 6188 | 57 | 4636 | 0 | 0 | 0 | logfile |
✔ | 8SEX | 40432 | 2023-08-16 | 2023-04-10 | 2.84 | 2.99 | 2.84 | 3.0 | 0.005 | 0.56 | 0.0 | 0.04 | 12.78 | 0.01 | 0.419 | 6.47 | 2.15 | 2.8 | 97.1 | 0.2 | 1.60 | 0.63 | 0.81 | 2.20 | 3.0 | 0.003 | 0.55 | 0.0 | 0.04 | 16.37 | 0.00 | 2.240 | 6.71 | 3.23 | 1.7 | 98.2 | 0.2 | 1.64 | 0.54 | 0.65 | 0.84 | 2.23 | 20568 | 2504 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 7UEG | 26474 | 2023-08-27 | 2022-03-21 | 4.0 | 4.46 | 4.14 | 4.2 | 0.034 | 0.79 | 6.0 | 0.05 | 12.16 | 0.01 | 0.436 | 24.88 | 0.00 | 8.9 | 90.9 | 0.2 | -2.77 | 0.67 | 0.78 | — | 4.2 | 0.031 | 0.86 | 4.0 | 0.05 | 13.96 | 0.01 | 1.815 | 21.63 | 0.16 | 10.7 | 89.0 | 0.3 | -2.70 | 0.57 | 0.68 | 0.82 | — | 49968 | 6480 | 36 | 0 | 0 | 0 | 0 | logfile |
✔ | 6FVW | 4322 | 2023-08-10 | 2018-03-05 | 4.5 | 4.60 | — | 4.6 | 0.035 | 3.52 | 888.0 | 0.20 | 17.57 | 0.03 | 0.436 | 3.52 | 2.98 | 5.7 | 92.3 | 2.0 | -2.29 | 0.50 | 0.54 | — | 4.5 | 0.004 | 0.85 | 0.0 | 0.05 | 14.95 | 0.00 | 1.867 | 19.38 | 0.03 | 5.0 | 94.8 | 0.2 | -0.60 | 2.34 | 0.56 | 0.76 | — | 110594 | 14032 | 59 | 0 | 12 | 20 | 0 | logfile |
✔ | 8Bi4 | 16076 | 2023-08-28 | 2022-11-01 | 4.3 | 4.52 | 4.39 | 4.5 | 0.004 | 0.97 | 0.0 | 0.05 | 11.50 | 0.01 | 0.452 | 10.80 | 0.14 | 4.0 | 95.6 | 0.3 | -0.49 | 0.64 | 0.81 | — | 4.5 | 0.006 | 0.86 | 0.0 | 0.05 | 13.52 | 0.01 | 2.057 | 10.58 | 0.04 | 5.4 | 94.6 | 0.0 | -0.63 | 1.65 | 0.65 | 0.84 | — | 145200 | 19404 | 132 | 0 | 0 | 0 | 0 | logfile |
✘ | 7ZGK | 14708 | 2023-08-13 | 2022-04-03 | 3.59 | 4.63 | 3.57 | 3.7 | 0.002 | 0.45 | 0.0 | 0.04 | 13.81 | 0.00 | 0.454 | 5.10 | 0.46 | 2.2 | 97.6 | 0.2 | 1.65 | 0.73 | 0.55 | 1.45 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13639 | 1723 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6i1X | 0326 | 2023-08-10 | 2018-10-30 | 3.7 | 3.83 | — | 3.8 | 0.013 | 1.81 | 34.0 | 0.10 | 14.94 | 0.01 | 0.458 | 50.06 | 4.35 | 7.5 | 90.6 | 1.9 | -3.51 | 0.50 | 0.32 | 0.28 | 3.8 | 0.003 | 0.77 | 0.0 | 0.05 | 16.37 | 0.00 | 2.134 | 17.07 | 0.28 | 4.8 | 95.0 | 0.2 | -0.88 | 1.06 | 0.65 | 0.60 | 0.83 | 54915 | 7290 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 7B70 | 12063 | 2023-08-14 | 2020-12-09 | 4.0 | 4.08 | — | 3.4 | 0.008 | 1.13 | 3.0 | 0.06 | 15.94 | 0.01 | 0.463 | 43.27 | 4.66 | 11.9 | 87.8 | 0.2 | -2.44 | 0.79 | 0.66 | — | 3.0 | 0.005 | 0.90 | 0.0 | 0.05 | 16.52 | 0.01 | 2.081 | 35.37 | 0.75 | 8.5 | 91.4 | 0.0 | -1.17 | 0.94 | 0.82 | 0.76 | — | 17084 | 2112 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SSZ | 25417 | 2023-08-14 | 2021-11-11 | 3.25 | 3.49 | — | 3.5 | 0.014 | 1.70 | 20.0 | 0.12 | 14.90 | 0.01 | 0.467 | 7.21 | 6.31 | 5.5 | 94.5 | 0.0 | -2.29 | 0.56 | 0.79 | 3.16 | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 15.33 | 0.00 | 2.207 | 6.13 | 0.12 | 3.9 | 96.1 | 0.0 | 1.04 | 1.35 | 0.70 | 0.83 | 3.32 | 15283 | 1908 | 9 | 0 | 3 | 0 | 0 | logfile |
✔ | 6XJA | 22204 | 2023-08-14 | 2020-06-23 | 4.0 | 4.11 | — | 3.7 | 0.023 | 1.93 | 31.0 | 0.12 | 18.04 | 0.01 | 0.468 | 73.73 | 18.43 | 6.1 | 92.2 | 1.7 | -1.93 | 0.69 | 0.54 | — | 3.8 | 0.006 | 0.92 | 0.0 | 0.05 | 16.57 | 0.01 | 2.021 | 31.92 | 1.09 | 10.6 | 89.2 | 0.2 | -2.48 | 2.56 | 0.76 | 0.68 | — | 16441 | 2156 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 5Y4o | 6805 | 2023-08-12 | 2017-08-04 | 3.8 | 3.55 | — | 3.6 | 0.022 | 2.44 | 28.0 | 0.12 | 19.88 | 0.02 | 0.471 | 78.50 | 20.31 | 7.8 | 87.8 | 4.5 | -2.08 | 0.55 | 0.62 | 0.20 | 3.6 | 0.003 | 0.77 | 0.0 | 0.04 | 17.56 | 0.00 | 2.042 | 14.00 | 0.45 | 7.0 | 92.5 | 0.5 | -0.18 | 1.75 | 0.59 | 0.72 | 1.52 | 12341 | 1561 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 5oA1 | 3727 | 2023-08-25 | 2017-06-20 | 4.4 | 5.36 | — | 4.5 | 0.027 | 1.76 | 1.0 | 0.07 | 19.15 | 0.01 | 0.473 | 26.25 | 8.67 | 5.4 | 93.4 | 1.2 | -1.92 | 0.70 | 0.49 | — | 4.6 | 0.012 | 0.85 | 0.0 | 0.05 | 15.81 | 0.01 | 2.042 | 30.09 | 0.00 | 6.4 | 93.4 | 0.2 | -0.18 | 3.30 | 0.78 | 0.66 | — | 43459 | 5668 | 39 | 105 | 7 | 0 | 0 | logfile |
✔ | 5M3F | 4147 | 2023-08-22 | 2016-10-14 | 3.8 | 3.88 | 3.92 | 3.9 | 0.006 | 0.89 | 0.0 | 0.05 | 11.59 | 0.01 | 0.477 | 14.25 | 1.14 | 6.6 | 93.1 | 0.3 | -3.19 | 0.59 | 0.74 | 2.61 | 3.9 | 0.003 | 0.67 | 0.0 | 0.04 | 16.04 | 0.00 | 2.073 | 9.22 | 0.24 | 3.6 | 96.4 | 0.0 | -0.69 | 1.68 | 0.63 | 0.78 | 1.56 | 34032 | 4161 | 22 | 47 | 8 | 0 | 0 | logfile |
✔ | 7U5D | 26348 | 2023-08-21 | 2022-03-02 | 3.52 | 3.22 | 3.45 | 3.4 | 0.013 | 1.65 | 1.0 | 0.09 | 14.82 | 0.01 | 0.483 | 10.61 | 0.20 | 3.2 | 96.7 | 0.2 | -0.43 | 0.86 | 0.79 | 3.11 | 3.4 | 0.004 | 0.66 | 0.0 | 0.04 | 16.61 | 0.00 | 2.190 | 5.35 | 0.39 | 4.6 | 95.4 | 0.0 | -0.13 | 0.75 | 0.89 | 0.86 | 2.78 | 31515 | 3603 | 13 | 141 | 0 | 0 | 0 | logfile |
✘ | 7L20 | 23121 | 2023-08-10 | 2020-12-15 | 3.15 | 3.39 | — | 3.4 | 0.007 | 0.87 | 0.0 | 0.05 | 16.21 | 0.01 | 0.505 | 10.97 | 0.84 | 7.3 | 92.2 | 0.5 | -3.38 | 0.69 | 0.79 | 2.68 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 110234 | 9454 | 67 | 1583 | 171 | 0 | 0 | logfile |
✔ | 7URT | 26718 | 2023-08-09 | 2022-04-22 | 2.39 | 2.51 | 2.52 | 2.5 | 0.008 | 0.96 | 0.0 | 0.07 | 14.02 | 0.01 | 0.512 | 6.62 | 1.60 | 0.9 | 99.1 | 0.0 | 1.22 | 0.71 | 0.82 | 4.21 | 2.5 | 0.036 | 3.37 | 11.0 | 0.30 | 17.01 | 0.01 | 0.291 | 9.27 | 1.09 | 1.7 | 98.2 | 0.1 | 1.92 | 1.13 | 0.69 | 0.81 | 2.58 | 107880 | 13260 | 60 | 0 | 120 | 0 | 0 | logfile |
✔ | 6SPG | 10285 | 2023-08-25 | 2019-09-01 | 3.34 | 3.45 | — | 3.4 | 0.007 | 0.91 | 0.0 | 0.05 | 16.43 | 0.01 | 0.514 | 3.96 | 0.30 | 8.6 | 91.4 | 0.0 | -5.03 | 0.84 | 0.81 | 2.64 | 3.4 | 0.005 | 0.72 | 0.0 | 0.04 | 17.07 | 0.01 | 1.832 | 9.45 | 0.61 | 8.9 | 91.1 | 0.0 | -2.69 | 0.66 | 0.87 | 0.86 | 2.05 | 141963 | 5779 | 58 | 4526 | 172 | 0 | 0 | logfile |
✔ | 8CKW | 16704 | 2023-08-13 | 2023-02-16 | 3.12 | 3.53 | 3.07 | 3.4 | 0.005 | 0.87 | 0.0 | 0.08 | 12.55 | 0.01 | 0.523 | 4.81 | 0.00 | 0.0 | 100.0 | 0.0 | -0.70 | 0.57 | 0.82 | 3.51 | 3.4 | 0.003 | 0.62 | 0.0 | 0.04 | 17.24 | 0.00 | 2.211 | 11.20 | 0.27 | 1.1 | 98.9 | 0.0 | 1.42 | 1.20 | 0.58 | 0.85 | 1.95 | 13890 | 1785 | 15 | 0 | 0 | 0 | 0 | logfile |
✘ | 7RL5 | 24516 | 2023-08-18 | 2021-07-23 | 3.8 | 3.61 | — | 3.8 | 0.013 | 2.04 | 24.0 | 0.11 | 16.71 | 0.02 | 0.524 | 3.05 | 2.05 | 3.3 | 96.3 | 0.4 | -1.86 | 0.40 | 0.52 | 2.12 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 106032 | 6708 | 24 | 0 | 24 | 0 | 52716 | logfile |
✔ | 5iYD | 8138 | 2023-08-26 | 2016-03-24 | 3.9 | 3.83 | — | 3.9 | 0.011 | 1.73 | 8.0 | 0.08 | 17.24 | 0.01 | 0.526 | 22.15 | 3.28 | 8.5 | 87.8 | 3.8 | -2.10 | 0.70 | 0.62 | 1.39 | 3.8 | 0.005 | 0.98 | 0.0 | 0.05 | 19.19 | 0.01 | 1.852 | 23.09 | 0.73 | 8.6 | 90.7 | 0.7 | -1.08 | 1.15 | 0.79 | 0.80 | 1.05 | 46709 | 5407 | 31 | 166 | 13 | 0 | 0 | logfile |