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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6PA7 | 20281 | 2022-04-06 | 2019-06-11 | 2.94 | 3.31 | — | 3.1 | 0.005 | 0.80 | 0.0 | 0.05 | 23.66 | 0.01 | 2.304 | 3.72 | 0.00 | 3.1 | 96.9 | 0.0 | -2.99 | 0.80 | 0.77 | 2.57 | 3.1 | 0.005 | 0.73 | 0.0 | 0.04 | 25.97 | 0.01 | 2.166 | 12.09 | 2.80 | 3.9 | 96.1 | 0.0 | 0.62 | 0.85 | 0.82 | 0.83 | 2.74 | 21019 | 1770 | 19 | 332 | 3 | 0 | 0 | logfile |
✔ | 6V1X | 21018 | 2022-04-05 | 2019-11-21 | 3.5 | 3.62 | — | 3.7 | 0.013 | 1.23 | 4.0 | 0.07 | 11.53 | 0.01 | 2.279 | 3.76 | 0.00 | 9.5 | 90.3 | 0.2 | -3.79 | 0.49 | 0.59 | 1.89 | 3.6 | 0.002 | 0.61 | 0.0 | 0.04 | 14.75 | 0.00 | 2.181 | 5.77 | 0.30 | 5.6 | 94.2 | 0.2 | 0.93 | 1.99 | 0.57 | 0.80 | 2.22 | 13996 | 1784 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 6YTV | 10924 | 2022-04-06 | 2020-04-24 | 4.39 | 3.96 | 4.35 | 3.9 | 0.004 | 0.78 | 0.0 | 0.04 | 14.56 | 0.00 | 2.183 | 16.16 | 0.00 | 6.0 | 93.5 | 0.4 | -2.08 | 0.58 | 0.76 | — | 3.9 | 0.003 | 0.76 | 0.0 | 0.04 | 14.57 | 0.00 | 2.199 | 12.04 | 0.00 | 7.0 | 92.7 | 0.2 | 0.08 | 1.55 | 0.56 | 0.73 | — | 19560 | 2520 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WB8 | 21586 | 2022-04-05 | 2020-03-26 | 3.24 | 3.55 | — | 3.5 | 0.011 | 0.89 | 0.0 | 0.05 | 8.78 | 0.00 | 2.124 | 16.94 | 0.00 | 5.9 | 93.9 | 0.2 | -3.70 | 0.73 | 0.79 | 3.73 | 3.5 | 0.004 | 0.70 | 0.0 | 0.04 | 15.00 | 0.00 | 2.111 | 8.71 | 0.07 | 4.5 | 95.2 | 0.2 | 1.29 | 1.65 | 0.71 | 0.85 | 2.98 | 14888 | 1852 | 8 | 0 | 12 | 0 | 0 | logfile |
✔ | 6Wi9 | 21683 | 2022-04-04 | 2020-04-09 | 4.3 | 4.37 | 4.24 | 4.3 | 0.002 | 0.50 | 0.0 | 0.04 | 12.85 | 0.00 | 2.214 | 5.37 | 0.00 | 4.2 | 95.8 | 0.0 | -3.72 | 0.77 | 0.78 | — | 4.3 | 0.004 | 0.73 | 0.0 | 0.04 | 13.93 | 0.00 | 2.087 | 14.09 | 0.00 | 6.6 | 93.4 | 0.0 | -0.58 | 0.80 | 0.78 | 0.78 | — | 8550 | 1108 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TBU | 10452 | 2022-04-05 | 2019-11-04 | 3.16 | 3.52 | — | 3.4 | 0.012 | 1.50 | 0.0 | 0.18 | 15.74 | 0.00 | 1.526 | 5.99 | 0.00 | 5.0 | 94.9 | 0.1 | -1.99 | 0.72 | 0.80 | 3.61 | 3.4 | 0.003 | 0.71 | 0.0 | 0.15 | 16.40 | 0.00 | 2.041 | 11.12 | 0.41 | 4.5 | 95.5 | 0.0 | 1.51 | 1.12 | 0.70 | 0.83 | 3.46 | 13733 | 842 | 3 | 0 | 12 | 0 | 6645 | logfile |
✔ | 6W18 | 21503 | 2022-04-05 | 2020-03-03 | 4.2 | 4.20 | 4.18 | 4.2 | 0.002 | 0.41 | 0.0 | 0.04 | 11.01 | 0.00 | 2.196 | 4.79 | 0.00 | 3.0 | 97.0 | 0.0 | -3.43 | 0.71 | 0.62 | — | 4.1 | 0.007 | 0.90 | 0.0 | 0.05 | 13.19 | 0.01 | 2.028 | 17.50 | 0.09 | 12.6 | 87.4 | 0.0 | -2.30 | 1.61 | 0.78 | 0.73 | — | 13151 | 1837 | 9 | 0 | 3 | 0 | 0 | logfile |
✔ | 6M54 | 30084 | 2022-04-08 | 2020-03-09 | 2.4 | 2.57 | — | 2.5 | 0.012 | 1.15 | 0.0 | 0.07 | 14.96 | 0.01 | 2.591 | 0.71 | 0.00 | 4.1 | 95.9 | 0.0 | -0.37 | 0.69 | 0.85 | 5.34 | 2.5 | 0.004 | 0.60 | 0.0 | 0.04 | 17.20 | 0.00 | 2.485 | 0.55 | 0.25 | 4.1 | 95.9 | 0.0 | 4.02 | 0.33 | 0.81 | 0.90 | 3.68 | 33382 | 4104 | 38 | 0 | 6 | 8 | 0 | logfile |
✔ | 6L1U | 0803 | 2022-04-05 | 2019-09-30 | 3.37 | 3.54 | — | 3.5 | 0.009 | 0.73 | 0.0 | 0.06 | 15.49 | 0.00 | 2.138 | 15.24 | 0.00 | 15.8 | 84.2 | 0.0 | -6.06 | 0.47 | 0.83 | 2.58 | 3.4 | 0.007 | 0.77 | 0.0 | 0.05 | 16.68 | 0.00 | 2.152 | 13.15 | 1.08 | 17.3 | 82.7 | 0.0 | -5.04 | 1.97 | 0.48 | 0.85 | 2.84 | 10515 | 1500 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 6L1T | 0801 | 2022-04-04 | 2019-09-30 | 3.22 | 3.42 | — | 3.4 | 0.010 | 0.74 | 0.0 | 0.06 | 14.17 | 0.00 | 2.296 | 12.89 | 0.00 | 12.6 | 87.4 | 0.0 | -5.37 | 0.49 | 0.84 | 2.71 | 3.4 | 0.005 | 0.71 | 0.0 | 0.05 | 16.26 | 0.00 | 2.210 | 11.36 | 0.15 | 10.0 | 90.0 | 0.0 | -4.00 | 1.41 | 0.49 | 0.86 | 3.55 | 7010 | 1000 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6U68 | 20662 | 2022-04-05 | 2019-08-29 | 4.5 | 4.54 | — | 4.5 | 0.006 | 0.90 | 0.0 | 0.06 | 4.27 | 0.00 | 2.419 | 0.52 | 0.00 | 2.6 | 97.3 | 0.1 | -3.82 | 0.71 | 0.71 | — | 4.5 | 0.002 | 0.74 | 0.0 | 0.05 | 4.16 | 0.00 | 2.318 | 2.42 | 0.00 | 3.8 | 96.2 | 0.0 | -0.64 | 1.80 | 0.77 | 0.81 | — | 10489 | 2133 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VW2 | 21410 | 2022-04-04 | 2020-02-18 | 3.4 | 3.62 | — | 3.8 | 0.006 | 1.13 | 0.0 | 0.06 | 14.20 | 0.01 | 2.292 | 24.13 | 0.00 | 27.3 | 72.7 | 0.0 | -4.46 | 0.42 | 0.71 | 2.71 | 3.9 | 0.005 | 0.96 | 0.0 | 0.05 | 14.94 | 0.00 | 2.171 | 15.12 | 0.95 | 19.5 | 80.5 | 0.0 | -4.88 | 0.44 | 0.40 | 0.72 | 1.55 | 1800 | 240 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WQK | 21871 | 2022-04-04 | 2020-04-29 | 3.1 | 3.26 | — | 3.3 | 0.003 | 0.70 | 0.0 | 0.04 | 14.47 | 0.00 | 2.272 | 4.54 | 0.00 | 1.8 | 98.2 | 0.0 | -5.40 | 0.48 | 0.84 | 4.99 | 3.3 | 0.004 | 0.72 | 0.0 | 0.05 | 13.47 | 0.00 | 2.242 | 4.54 | 0.00 | 4.4 | 95.6 | 0.0 | -4.42 | 0.47 | 0.47 | 0.86 | 5.39 | 2070 | 285 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6YTo | 10920 | 2022-04-09 | 2020-04-24 | 4.24 | 4.32 | 4.19 | 4.3 | 0.005 | 0.70 | 0.0 | 0.04 | 13.41 | 0.00 | 2.282 | 10.16 | 0.00 | 1.9 | 98.1 | 0.0 | -0.08 | 0.67 | 0.83 | — | 4.3 | 0.003 | 0.63 | 0.0 | 0.04 | 13.55 | 0.00 | 2.010 | 9.02 | 0.06 | 2.6 | 97.4 | 0.0 | 2.79 | 0.73 | 0.67 | 0.82 | — | 41620 | 5340 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CAL | 30334 | 2022-04-05 | 2020-06-09 | 3.2 | 3.36 | — | 3.3 | 0.007 | 1.09 | 0.0 | 0.06 | 14.52 | 0.01 | 2.265 | 2.14 | 0.00 | 14.0 | 85.7 | 0.2 | -6.34 | 0.71 | 0.82 | 3.61 | 3.3 | 0.004 | 0.79 | 0.0 | 0.04 | 15.70 | 0.01 | 2.248 | 6.46 | 0.43 | 10.4 | 89.4 | 0.2 | -1.45 | 1.52 | 0.69 | 0.80 | 2.63 | 14064 | 1776 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 6LRQ | 0958 | 2022-04-04 | 2020-01-16 | 3.49 | 3.59 | — | 4.0 | 0.009 | 0.85 | 0.0 | 0.05 | 11.88 | 0.00 | 2.205 | 20.30 | 0.00 | 14.8 | 85.2 | 0.0 | -4.51 | 0.46 | 0.71 | 1.87 | 4.1 | 0.006 | 0.85 | 0.0 | 0.05 | 14.46 | 0.00 | 2.147 | 19.93 | 0.74 | 12.8 | 87.2 | 0.0 | -3.04 | 1.58 | 0.46 | 0.71 | 1.16 | 2628 | 378 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JoA | 22409 | 2022-04-05 | 2020-08-06 | 3.3 | 3.05 | — | 3.2 | 0.009 | 0.78 | 0.0 | 0.04 | 26.00 | 0.01 | 2.206 | 6.32 | 0.00 | 6.5 | 93.5 | 0.0 | -0.33 | 0.79 | 0.82 | 1.49 | 3.2 | 0.004 | 0.61 | 0.0 | 0.04 | 26.32 | 0.00 | 2.251 | 5.78 | 0.21 | 2.9 | 97.1 | 0.0 | 1.79 | 4.78 | 0.81 | 0.85 | 1.66 | 14994 | 1125 | 11 | 290 | 1 | 0 | 0 | logfile |
✔ | 6T7A | 10391 | 2022-04-05 | 2019-10-21 | 3.7 | 4.20 | 3.60 | 3.7 | 0.006 | 0.87 | 0.0 | 0.05 | 25.96 | 0.01 | 0.733 | 6.61 | 0.00 | 1.8 | 98.1 | 0.1 | -3.03 | 0.85 | 0.81 | 1.66 | 3.7 | 0.005 | 0.75 | 0.0 | 0.04 | 26.72 | 0.00 | 2.144 | 15.79 | 0.47 | 1.9 | 98.1 | 0.0 | 2.15 | 1.75 | 0.87 | 0.85 | 1.33 | 10338 | 847 | 11 | 190 | 0 | 0 | 0 | logfile |
✔ | 6oZC | 20224 | 2022-04-07 | 2019-05-15 | 3.79 | 4.35 | — | 4.2 | 0.022 | 1.83 | 0.0 | 0.11 | 10.38 | 0.01 | 2.303 | 0.99 | 0.00 | 3.1 | 96.2 | 0.7 | 0.38 | 0.79 | 0.82 | 2.11 | 4.2 | 0.004 | 0.74 | 0.0 | 0.04 | 14.02 | 0.01 | 2.113 | 12.54 | 0.23 | 5.0 | 94.9 | 0.1 | -0.36 | 2.07 | 0.78 | 0.80 | 1.50 | 25821 | 3027 | 54 | 0 | 186 | 0 | 0 | logfile |
✔ | 6V93 | 21115 | 2022-04-06 | 2019-12-13 | 3.1 | 3.37 | — | 3.3 | 0.006 | 0.74 | 0.0 | 0.75 | 12.61 | 0.00 | 2.117 | 5.79 | 0.00 | 7.0 | 93.0 | 0.0 | -2.84 | 0.78 | 0.84 | 3.32 | 3.3 | 0.011 | 1.47 | 1.0 | 0.24 | 14.52 | 0.00 | 2.113 | 7.50 | 0.06 | 7.0 | 93.0 | 0.0 | -0.50 | 0.33 | 0.80 | 0.86 | 3.23 | 18105 | 2198 | 14 | 26 | 4 | 220 | 0 | logfile |