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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6MUP | 9251 | 2023-02-21 | 2018-10-23 | 3.5 | 3.90 | — | 3.8 | 0.013 | 1.19 | 1.0 | 0.06 | 25.79 | 0.01 | 1.379 | 7.59 | 1.08 | 10.3 | 89.2 | 0.5 | -6.36 | 0.61 | 0.61 | 2.67 | 3.8 | 0.003 | 0.67 | 0.0 | 0.04 | 26.68 | 0.00 | 2.161 | 10.99 | 0.59 | 8.9 | 91.1 | 0.0 | -1.94 | 0.78 | 0.74 | 0.78 | 1.36 | 15803 | 1224 | 14 | 294 | 0 | 0 | 0 | logfile |
✔ | 6M23 | 30061 | 2023-02-21 | 2020-02-26 | 3.2 | 3.49 | — | 3.3 | 0.010 | 1.11 | 0.0 | 0.07 | 14.80 | 0.01 | 2.216 | 8.01 | 2.32 | 10.7 | 87.8 | 1.5 | -6.36 | 0.68 | 0.79 | 2.75 | 3.4 | 0.003 | 0.78 | 0.0 | 0.04 | 15.74 | 0.00 | 2.188 | 7.43 | 0.45 | 10.5 | 89.0 | 0.5 | -1.56 | 0.77 | 0.67 | 0.83 | 2.34 | 14744 | 1872 | 12 | 0 | 18 | 2 | 0 | logfile |
✔ | 5LiJ | 4054 | 2023-02-16 | 2016-07-14 | 4.2 | 3.63 | — | 4.2 | 0.009 | 2.92 | 4.0 | 0.17 | 15.82 | 0.01 | 2.249 | 25.64 | 0.00 | 10.7 | 89.3 | 0.0 | -6.36 | 0.85 | 0.76 | — | 3.8 | 0.005 | 1.18 | 0.0 | 0.04 | 10.31 | 0.00 | 2.148 | 15.12 | 0.00 | 32.0 | 68.0 | 0.0 | -5.66 | 1.48 | 0.86 | 0.78 | — | 761 | 152 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LR0 | 31583 | 2023-02-19 | 2020-01-15 | 3.5 | 3.87 | — | 3.8 | 0.011 | 1.38 | 0.0 | 0.07 | 13.07 | 0.01 | 2.291 | 5.77 | 0.88 | 11.0 | 88.9 | 0.1 | -6.35 | 0.66 | 0.78 | 1.71 | 3.8 | 0.003 | 0.76 | 0.0 | 0.04 | 15.43 | 0.00 | 2.162 | 9.47 | 0.39 | 6.5 | 93.5 | 0.0 | -3.41 | 0.84 | 0.64 | 0.75 | 0.73 | 9576 | 1230 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6YKR | 10830 | 2023-02-19 | 2020-04-06 | 3.0 | 3.10 | 2.86 | 3.1 | 0.004 | 0.84 | 0.0 | 0.05 | 9.41 | 0.01 | 2.314 | 2.28 | 0.00 | 2.6 | 97.4 | 0.0 | -6.35 | 0.66 | 0.85 | 5.11 | 3.1 | 0.003 | 0.66 | 0.0 | 0.04 | 16.02 | 0.00 | 2.274 | 7.67 | 1.02 | 2.4 | 97.6 | 0.0 | 1.06 | 1.15 | 0.67 | 0.88 | 3.55 | 10189 | 1326 | 9 | 0 | 0 | 6 | 0 | logfile |
✔ | 6WUN | 21917 | 2023-02-19 | 2020-05-04 | 3.9 | 4.00 | — | 3.9 | 0.005 | 0.80 | 0.0 | 0.05 | 13.70 | 0.00 | 2.166 | 14.26 | 1.14 | 18.4 | 81.6 | 0.0 | -6.35 | 0.68 | 0.80 | 1.75 | 3.9 | 0.005 | 0.78 | 0.0 | 0.04 | 14.77 | 0.00 | 2.028 | 12.03 | 0.38 | 16.1 | 83.8 | 0.1 | -3.62 | 0.57 | 0.68 | 0.80 | 1.47 | 10082 | 1326 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oVH | 20212 | 2023-02-19 | 2019-05-07 | 2.6 | 2.81 | 2.71 | 2.8 | 0.014 | 1.10 | 0.0 | 0.04 | 17.48 | 0.01 | 1.203 | 1.15 | 4.55 | 1.0 | 99.0 | 0.0 | -6.34 | 0.75 | 0.87 | 4.63 | 2.8 | 0.003 | 0.75 | 0.0 | 0.04 | 18.69 | 0.00 | 2.055 | 2.87 | 0.38 | 0.8 | 99.2 | 0.0 | 2.63 | 0.98 | 0.77 | 0.88 | 3.77 | 10895 | 1272 | 36 | 0 | 68 | 171 | 0 | logfile |
✔ | 6V7B | 21094 | 2023-02-22 | 2019-12-08 | 3.4 | 3.51 | — | 3.4 | 0.008 | 0.84 | 0.0 | 0.05 | 16.16 | 0.01 | 2.234 | 4.03 | 0.11 | 3.1 | 96.9 | 0.0 | -6.34 | 0.58 | 0.88 | 2.82 | 3.4 | 0.005 | 0.70 | 0.0 | 0.04 | 17.30 | 0.00 | 2.011 | 11.41 | 0.56 | 3.7 | 96.3 | 0.0 | 1.57 | 0.64 | 0.58 | 0.89 | 2.14 | 58277 | 5635 | 48 | 646 | 0 | 0 | 0 | logfile |
✔ | 7CAL | 30334 | 2023-02-21 | 2020-06-09 | 3.2 | 3.36 | — | 3.3 | 0.007 | 1.09 | 0.0 | 0.06 | 14.52 | 0.01 | 2.265 | 2.29 | 0.00 | 14.0 | 85.7 | 0.2 | -6.34 | 0.71 | 0.82 | 3.61 | 3.3 | 0.003 | 0.73 | 0.0 | 0.04 | 15.59 | 0.00 | 2.257 | 6.17 | 0.93 | 10.6 | 89.1 | 0.2 | -1.85 | 1.50 | 0.70 | 0.82 | 2.65 | 14064 | 1776 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 6TD6 | 10464 | 2023-02-21 | 2019-11-07 | 4.76 | 5.03 | — | 4.8 | 0.010 | 1.11 | 0.0 | 0.07 | 16.37 | 0.01 | 1.777 | 55.96 | 0.35 | 22.8 | 76.8 | 0.4 | -6.33 | 0.62 | 0.70 | — | 4.8 | 0.003 | 0.69 | 0.0 | 0.04 | 14.88 | 0.00 | 1.903 | 18.97 | 0.00 | 10.5 | 89.5 | 0.0 | -1.31 | 1.44 | 0.59 | 0.69 | — | 15680 | 982 | 4 | 0 | 3 | 0 | 7766 | logfile |
✔ | 7SHM | 25130 | 2023-02-19 | 2021-10-09 | 3.14 | 3.35 | — | 3.4 | 0.006 | 1.17 | 3.0 | 0.06 | 15.18 | 0.01 | 2.322 | 4.99 | 0.21 | 3.0 | 97.0 | 0.0 | -6.33 | 0.64 | 0.82 | 2.64 | 3.4 | 0.003 | 0.65 | 0.0 | 0.04 | 16.61 | 0.00 | 2.183 | 8.83 | 0.31 | 4.1 | 95.9 | 0.0 | 0.17 | 0.59 | 0.62 | 0.84 | 2.66 | 9186 | 1142 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 6o6A | 0631 | 2023-02-26 | 2019-03-05 | 3.6 | 3.69 | — | 3.6 | 0.008 | 0.99 | 0.0 | 0.06 | 15.67 | 0.01 | 1.986 | 6.27 | 0.00 | 7.4 | 92.6 | 0.0 | -6.33 | 0.60 | 0.77 | 2.17 | 3.6 | 0.004 | 0.78 | 0.0 | 0.04 | 17.50 | 0.00 | 2.099 | 13.84 | 0.91 | 7.8 | 92.2 | 0.0 | -1.00 | 2.51 | 0.62 | 0.78 | 1.17 | 27220 | 3312 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 6VoY | 21301 | 2023-02-22 | 2020-02-01 | 3.7 | 4.09 | — | 4.0 | 0.013 | 1.52 | 30.0 | 0.10 | 24.39 | 0.01 | 1.583 | 35.03 | 0.46 | 2.4 | 97.6 | 0.0 | -6.32 | 0.69 | 0.82 | 2.12 | 4.0 | 0.004 | 0.97 | 0.0 | 0.05 | 24.50 | 0.00 | 1.926 | 19.23 | 0.33 | 12.2 | 87.7 | 0.1 | -2.68 | 1.13 | 0.67 | 0.79 | 1.17 | 17556 | 1724 | 16 | 180 | 6 | 0 | 0 | logfile |
✔ | 6F2D | 4173 | 2023-02-20 | 2017-11-24 | 4.2 | 4.27 | 4.05 | 4.1 | 0.010 | 1.19 | 0.0 | 0.05 | 9.30 | 0.01 | 2.023 | 26.29 | 0.51 | 16.3 | 83.0 | 0.7 | -6.32 | 0.71 | 0.72 | — | 4.1 | 0.003 | 0.89 | 0.0 | 0.04 | 12.97 | 0.01 | 2.156 | 12.99 | 0.00 | 7.5 | 91.9 | 0.6 | 0.19 | 2.03 | 0.75 | 0.77 | — | 12541 | 1629 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 5XB1 | 6714 | 2023-02-27 | 2017-03-15 | 3.0 | 3.16 | 2.84 | 3.1 | 0.007 | 0.71 | 0.0 | 0.05 | 10.82 | 0.00 | 2.173 | 4.34 | 0.00 | 2.0 | 98.0 | 0.0 | -6.31 | 0.80 | 0.88 | 4.19 | 3.1 | 0.003 | 0.56 | 0.0 | 0.04 | 17.97 | 0.00 | 2.170 | 3.09 | 3.33 | 2.9 | 97.1 | 0.0 | 3.51 | 0.68 | 0.79 | 0.86 | 2.76 | 30847 | 3720 | 48 | 0 | 0 | 55 | 0 | logfile |
✔ | 6WTD | 21894 | 2023-02-19 | 2020-05-02 | 4.2 | 4.24 | — | 4.2 | 0.007 | 1.17 | 0.0 | 0.06 | 15.33 | 0.01 | 2.208 | 7.39 | 0.86 | 7.2 | 92.8 | 0.0 | -6.31 | 0.56 | 0.74 | — | 4.2 | 0.003 | 0.82 | 0.0 | 0.04 | 13.36 | 0.00 | 2.160 | 13.12 | 0.00 | 3.9 | 96.1 | 0.0 | -2.14 | 1.95 | 0.55 | 0.71 | — | 9139 | 1233 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HCY | 0199 | 2023-02-19 | 2018-08-17 | 3.1 | 3.48 | 3.04 | 3.4 | 0.015 | 1.26 | 0.0 | 0.06 | 13.92 | 0.01 | 2.017 | 2.66 | 0.79 | 6.2 | 93.8 | 0.0 | -6.30 | 0.67 | 0.89 | 5.10 | 3.4 | 0.003 | 0.65 | 0.0 | 0.04 | 14.75 | 0.00 | 2.149 | 6.50 | 0.35 | 5.0 | 95.0 | 0.0 | 0.33 | 1.75 | 0.71 | 0.91 | 3.33 | 11007 | 1308 | 6 | 0 | 15 | 0 | 0 | logfile |
✔ | 6VHL | 21207 | 2023-02-16 | 2020-01-10 | 3.3 | 3.60 | — | 3.5 | 0.007 | 1.03 | 0.0 | 0.07 | 15.85 | 0.01 | 1.791 | 14.51 | 4.48 | 14.7 | 85.3 | 0.0 | -6.30 | 0.26 | 0.70 | 3.54 | 3.8 | 0.003 | 0.76 | 0.0 | 0.04 | 16.24 | 0.00 | 2.321 | 8.71 | 0.00 | 8.7 | 91.3 | 0.0 | -3.58 | 2.81 | 0.26 | 0.69 | 3.41 | 1190 | 158 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7AAV | 11693 | 2023-02-25 | 2020-09-04 | 4.2 | 4.27 | — | 4.1 | 0.003 | 0.78 | 0.0 | 0.15 | 12.59 | 0.01 | 2.116 | 1.53 | 0.18 | 8.9 | 91.1 | 0.1 | -6.29 | 0.76 | 0.77 | — | 4.1 | 0.005 | 0.77 | 0.0 | 0.05 | 13.56 | 0.00 | 1.779 | 7.80 | 0.00 | 14.8 | 85.2 | 0.0 | -1.34 | 0.53 | 0.78 | 0.80 | — | 25867 | 3970 | 19 | 181 | 3 | 0 | 0 | logfile |
✔ | 7EEP | 31079 | 2023-02-26 | 2021-03-19 | 3.75 | 3.62 | — | 3.7 | 0.009 | 1.20 | 0.0 | 0.07 | 11.99 | 0.01 | 2.267 | 3.30 | 1.19 | 10.3 | 89.6 | 0.1 | -6.29 | 0.63 | 0.84 | 2.90 | 3.7 | 0.003 | 0.73 | 0.0 | 0.04 | 16.01 | 0.00 | 2.097 | 7.61 | 0.51 | 7.9 | 92.1 | 0.0 | -3.35 | 1.23 | 0.61 | 0.83 | 2.06 | 68076 | 8532 | 24 | 0 | 0 | 0 | 0 | logfile |