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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7KQE | 22997 | 2023-04-25 | 2020-11-15 | 2.88 | 3.80 | 2.90 | 3.4 | 0.012 | 1.80 | 8.0 | 0.10 | 13.99 | 0.01 | 2.478 | 0.25 | 1.08 | 6.3 | 93.6 | 0.1 | -1.09 | 0.73 | 0.37 | 2.42 | 2.9 | 0.003 | 0.59 | 0.0 | 0.04 | 14.25 | 0.00 | 2.025 | 4.55 | 0.77 | 4.4 | 95.6 | 0.0 | -0.11 | 0.67 | 0.87 | 0.83 | 2.31 | 68370 | 4467 | 9 | 0 | 0 | 0 | 33744 | logfile |
✔ | 8E5L | 27914 | 2023-04-25 | 2022-08-22 | 4.2 | 8.91 | 5.82 | 7.6 | 0.003 | 0.64 | 0.0 | 0.04 | 11.68 | 0.00 | 1.299 | 26.62 | 1.63 | 1.3 | 98.4 | 0.3 | -0.83 | 0.63 | 0.37 | — | 7.5 | 0.002 | 0.65 | 0.0 | 0.04 | 12.02 | 0.00 | 1.046 | 16.48 | 0.00 | 2.4 | 97.6 | 0.0 | 0.49 | 1.33 | 0.89 | 0.83 | — | 20058 | 2502 | 13 | 9 | 18 | 0 | 0 | logfile |
✔ | 7W0F | 32241 | 2023-04-23 | 2021-11-18 | 4.55 | 8.43 | — | 7.5 | 0.003 | 0.64 | 1.0 | 0.04 | 14.12 | 0.00 | 1.356 | 21.15 | 1.19 | 4.4 | 94.7 | 0.8 | -0.94 | 0.71 | 0.38 | — | 7.4 | 0.003 | 0.66 | 0.0 | 0.04 | 14.18 | 0.00 | 2.160 | 18.40 | 0.00 | 5.1 | 94.9 | 0.1 | -0.71 | 1.00 | 0.87 | 0.70 | — | 14097 | 1492 | 6 | 94 | 0 | 0 | 0 | logfile |
✔ | 3JAU | 6366 | 2023-04-22 | 2015-06-24 | 4.8 | 4.76 | — | 6.0 | 0.027 | 2.66 | 660.0 | 0.16 | 14.74 | 0.02 | 1.686 | 10.72 | 1.90 | 4.6 | 94.1 | 1.3 | -2.16 | 0.21 | 0.38 | — | 5.4 | 0.003 | 0.70 | 0.0 | 0.04 | 13.62 | 0.00 | 2.034 | 12.63 | 0.00 | 4.6 | 95.0 | 0.4 | -1.07 | 1.45 | 0.24 | 0.57 | — | 114900 | 14700 | 180 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M3L | 23656 | 2023-04-20 | 2021-03-18 | 3.2 | 4.99 | — | 3.3 | 0.009 | 0.97 | 0.0 | 0.06 | 15.05 | 0.01 | 1.551 | 6.78 | 0.30 | 9.1 | 90.6 | 0.3 | -3.19 | 0.29 | 0.38 | 0.40 | 3.1 | 0.004 | 0.72 | 0.0 | 0.04 | 15.15 | 0.00 | 2.043 | 15.39 | 0.30 | 7.0 | 92.8 | 0.1 | -0.73 | 3.83 | 0.46 | 0.76 | 1.89 | 6113 | 775 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Pii | 13437 | 2023-04-22 | 2021-08-19 | 2.68 | 2.39 | — | 2.7 | 0.010 | 0.78 | 0.0 | 0.05 | 28.29 | 0.00 | 2.229 | 8.23 | 0.31 | 4.0 | 96.0 | 0.0 | -0.89 | 0.51 | 0.38 | 3.69 | 2.6 | 0.004 | 0.66 | 0.0 | 0.04 | 29.02 | 0.00 | 2.175 | 7.79 | 2.33 | 2.8 | 97.2 | 0.0 | 1.88 | 0.98 | 0.81 | 0.88 | 3.36 | 11192 | 779 | 12 | 245 | 0 | 0 | 0 | logfile |
✔ | 6MWQ | 9277 | 2023-04-26 | 2018-10-30 | 3.0 | 3.33 | 2.89 | 3.1 | 0.001 | 0.36 | 0.0 | 0.04 | 4.66 | 0.00 | 2.321 | 4.19 | 0.13 | 11.0 | 87.5 | 1.5 | -4.81 | 0.54 | 0.39 | 0.22 | 3.1 | 0.003 | 0.72 | 0.0 | 0.04 | 13.43 | 0.00 | 2.152 | 8.38 | 1.78 | 4.1 | 95.7 | 0.2 | -1.12 | 1.34 | 0.78 | 0.87 | 1.94 | 22072 | 2873 | 8 | 0 | 0 | 0 | 0 | logfile |
✘ | 6PV6 | 20486 | 2023-04-24 | 2019-07-19 | 4.5 | 5.79 | — | 3.8 | 0.006 | 1.04 | 0.0 | 0.05 | 10.65 | 0.01 | 1.373 | 9.47 | 0.31 | 11.0 | 88.9 | 0.1 | -4.72 | 0.60 | 0.39 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✔ | 7R5R | 14334 | 2023-04-22 | 2022-02-11 | 2.44 | 3.05 | — | 2.9 | 0.004 | 0.66 | 0.0 | 0.04 | 27.14 | 0.00 | 2.226 | 6.02 | 0.31 | 2.5 | 97.5 | 0.0 | -0.10 | 0.59 | 0.39 | 3.60 | 2.8 | 0.014 | 0.90 | 0.0 | 0.04 | 28.54 | 0.01 | 2.131 | 5.12 | 1.71 | 3.6 | 96.4 | 0.0 | 1.78 | 0.94 | 0.81 | 0.87 | 3.25 | 11625 | 779 | 12 | 266 | 0 | 0 | 0 | logfile |
✔ | 3JAC | 6343 | 2023-04-23 | 2015-06-05 | 4.8 | 6.42 | — | 9.4 | 0.007 | 1.81 | 3.0 | 0.07 | 10.64 | 0.03 | 1.020 | 57.64 | 4.17 | 5.0 | 90.3 | 4.8 | 1.36 | 0.42 | 0.40 | — | 9.1 | 0.012 | 1.69 | 0.0 | 0.06 | 13.69 | 0.01 | 1.923 | 77.11 | 0.00 | 27.1 | 71.7 | 1.2 | -5.31 | 3.69 | 0.54 | 0.61 | — | 15741 | 1716 | 3 | 0 | 1038 | 0 | 0 | logfile |
✔ | 5A63 | 3061 | 2023-04-21 | 2015-06-24 | 3.4 | 3.50 | 3.42 | 3.5 | 0.010 | 1.69 | 8.0 | 0.11 | 19.07 | 0.01 | 2.079 | 39.51 | 13.74 | 6.4 | 91.5 | 2.1 | -0.17 | 0.36 | 0.40 | 2.09 | 3.5 | 0.003 | 0.76 | 0.0 | 0.04 | 17.76 | 0.00 | 2.217 | 12.14 | 1.05 | 5.5 | 94.1 | 0.3 | 0.06 | 3.24 | 0.62 | 0.82 | 1.80 | 10003 | 1223 | 13 | 0 | 22 | 0 | 0 | logfile |
✔ | 7K8D | 22728 | 2023-04-21 | 2020-09-26 | 4.33 | 4.48 | — | 4.7 | 0.004 | 1.12 | 0.0 | 0.06 | 12.53 | 0.01 | 2.205 | 23.61 | 1.86 | 4.3 | 95.7 | 0.0 | -2.98 | 0.33 | 0.40 | — | 4.6 | 0.003 | 0.80 | 0.0 | 0.04 | 13.50 | 0.01 | 2.094 | 15.68 | 0.00 | 4.9 | 95.1 | 0.0 | 0.82 | 1.46 | 0.41 | 0.49 | — | 5529 | 725 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZY | 24783 | 2023-04-24 | 2021-08-28 | 3.5 | 2.57 | 3.55 | 4.0 | 0.014 | 1.83 | 0.0 | 0.08 | 14.40 | 0.00 | 2.491 | 1.92 | 0.80 | 10.2 | 88.4 | 1.4 | -2.89 | 0.55 | 0.40 | 0.25 | 3.5 | 0.004 | 0.85 | 0.0 | 0.04 | 17.34 | 0.01 | 2.066 | 15.14 | 0.58 | 8.2 | 91.3 | 0.6 | -1.30 | 1.41 | 0.72 | 0.67 | 1.20 | 17458 | 2177 | 13 | 0 | 7 | 0 | 0 | logfile |
✔ | 6G90 | 4364 | 2023-04-23 | 2018-04-10 | 4.0 | 4.12 | — | 3.9 | 0.009 | 1.30 | 2.0 | 0.07 | 12.73 | 0.03 | 1.687 | 19.01 | 0.57 | 7.8 | 91.4 | 0.8 | -3.55 | 0.51 | 0.41 | — | 3.9 | 0.003 | 0.90 | 0.0 | 0.04 | 15.20 | 0.01 | 2.102 | 17.69 | 0.21 | 7.5 | 92.2 | 0.3 | -0.80 | 3.85 | 0.58 | 0.57 | — | 65050 | 6796 | 43 | 474 | 223 | 0 | 0 | logfile |
✔ | 7NKi | 12440 | 2023-04-28 | 2021-02-18 | 4.67 | 4.96 | — | 4.6 | 0.004 | 0.67 | 0.0 | 0.04 | 13.49 | 0.01 | 1.908 | 8.85 | 0.00 | 4.0 | 96.0 | 0.0 | -0.64 | 0.67 | 0.41 | — | 4.6 | 0.003 | 0.69 | 0.0 | 0.04 | 14.03 | 0.00 | 1.901 | 21.72 | 0.00 | 6.5 | 93.5 | 0.0 | -1.27 | 2.38 | 0.80 | 0.65 | — | 28775 | 1794 | 6 | 23 | 0 | 0 | 13868 | logfile |
✔ | 5X59 | 6704 | 2023-04-28 | 2017-02-15 | 3.7 | 3.77 | — | 3.7 | 0.011 | 1.66 | 0.0 | 0.08 | 14.57 | 0.01 | 1.477 | 23.24 | 4.97 | 13.2 | 85.4 | 1.3 | -3.87 | 0.48 | 0.41 | 0.15 | 3.7 | 0.005 | 1.02 | 0.0 | 0.05 | 15.80 | 0.01 | 1.921 | 22.27 | 0.65 | 13.4 | 86.4 | 0.2 | -2.42 | 1.59 | 0.60 | 0.65 | 1.20 | 26838 | 3423 | 6 | 0 | 30 | 0 | 0 | logfile |
✔ | 7MLV | 23911 | 2023-04-23 | 2021-04-29 | 4.1 | 4.82 | — | 3.9 | 0.005 | 1.02 | 0.0 | 0.06 | 10.90 | 0.01 | 2.168 | 5.10 | 0.00 | 7.1 | 92.9 | 0.0 | -5.14 | 0.62 | 0.41 | — | 3.9 | 0.014 | 1.03 | 0.0 | 0.05 | 12.11 | 0.01 | 2.077 | 29.77 | 0.00 | 11.6 | 88.4 | 0.0 | -3.33 | 1.72 | 0.70 | 0.70 | — | 15055 | 1919 | 16 | 0 | 22 | 0 | 0 | logfile |
✔ | 7oCK | 12809 | 2023-04-28 | 2021-04-27 | 3.6 | 5.02 | — | 8.3 | 0.008 | 0.86 | 0.0 | 0.05 | 14.98 | 0.01 | 1.988 | 36.10 | 0.20 | 7.7 | 92.1 | 0.2 | -2.93 | 0.80 | 0.41 | -0.16 | 5.6 | 0.005 | 0.92 | 0.0 | 0.05 | 16.96 | 0.01 | 2.008 | 39.34 | 0.37 | 7.5 | 92.4 | 0.1 | -1.36 | 1.42 | 0.87 | 0.65 | 0.03 | 28276 | 3666 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HDD | 0204 | 2023-04-28 | 2018-08-17 | 4.5 | 5.28 | — | 4.4 | 0.009 | 1.36 | 3.0 | 0.08 | 12.60 | 0.01 | 2.220 | 12.08 | 1.07 | 18.3 | 81.6 | 0.1 | -6.11 | 0.74 | 0.42 | — | 8.5 | 0.005 | 1.07 | 0.0 | 0.05 | 13.67 | 0.01 | 1.438 | 29.15 | 0.00 | 16.5 | 83.1 | 0.4 | -3.27 | 5.54 | 0.87 | 0.54 | — | 28154 | 3605 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WD9 | 32435 | 2023-04-26 | 2021-12-21 | 3.7 | 4.02 | — | 3.8 | 0.003 | 0.46 | 0.0 | 0.04 | 7.35 | 0.00 | 1.967 | 2.78 | 0.00 | 4.2 | 95.6 | 0.1 | -1.79 | 0.57 | 0.42 | 0.74 | 3.8 | 0.003 | 0.64 | 0.0 | 0.04 | 13.62 | 0.00 | 1.877 | 11.74 | 0.23 | 5.5 | 94.4 | 0.1 | -0.85 | 1.33 | 0.75 | 0.68 | 1.07 | 69720 | 4533 | 9 | 0 | 0 | 0 | 34404 | logfile |