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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6SPD | 10282 | 2024-03-18 | 2019-09-01 | 3.28 | 3.35 | — | 3.3 | 0.010 | 1.16 | 0.0 | 0.06 | 24.53 | 0.01 | 0.400 | 15.51 | 1.26 | 12.2 | 87.1 | 0.7 | -5.12 | 0.66 | 0.50 | 0.28 | 3.3 | 0.003 | 0.69 | 1.0 | 0.04 | 23.78 | 0.00 | 2.061 | 9.37 | 3.57 | 10.4 | 89.5 | 0.1 | -3.00 | 1.89 | 0.86 | 0.85 | 1.81 | 90352 | 3458 | 32 | 2967 | 0 | 0 | 0 | logfile |
✔ | 5ZLU | 6934 | 2024-03-27 | 2018-03-29 | 3.6 | 3.66 | — | 3.6 | 0.008 | 1.26 | 2.0 | 0.07 | 24.87 | 0.01 | 0.401 | 13.10 | 2.52 | 18.9 | 79.1 | 1.9 | -5.90 | 0.78 | 0.77 | 1.74 | 3.6 | 0.004 | 0.84 | 1.0 | 0.04 | 24.65 | 0.01 | 2.059 | 12.70 | 6.90 | 19.8 | 79.4 | 0.7 | -4.50 | 0.55 | 0.78 | 0.78 | 0.91 | 150313 | 6529 | 60 | 4596 | 4 | 0 | 0 | logfile |
✔ | 8HEG | 34690 | 2024-03-20 | 2022-11-08 | 3.2 | 3.40 | 3.27 | 3.4 | 0.004 | 0.70 | 0.0 | 0.04 | 15.87 | 0.01 | 0.403 | 16.75 | 1.09 | 7.1 | 92.6 | 0.3 | -1.33 | 0.69 | 0.78 | 2.57 | 3.4 | 0.003 | 0.60 | 0.0 | 0.04 | 16.50 | 0.00 | 2.082 | 6.74 | 3.84 | 6.0 | 93.9 | 0.1 | -1.15 | 1.24 | 0.70 | 0.78 | 2.46 | 26595 | 3385 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TXi | 26158 | 2024-03-20 | 2022-02-09 | 3.5 | 3.86 | — | 3.7 | 0.008 | 0.99 | 0.0 | 0.05 | 12.09 | 0.01 | 0.409 | 13.97 | 0.00 | 5.7 | 93.8 | 0.5 | 1.39 | 0.53 | 0.82 | 2.16 | 3.7 | 0.004 | 0.82 | 0.0 | 0.05 | 15.45 | 0.01 | 2.149 | 12.15 | 2.75 | 6.7 | 92.8 | 0.5 | 0.50 | 1.28 | 0.54 | 0.84 | 2.52 | 28660 | 3920 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 6i26 | 0328 | 2024-03-19 | 2018-10-31 | 4.3 | 4.37 | — | 4.2 | 0.005 | 0.89 | 0.0 | 0.05 | 8.22 | 0.01 | 0.411 | 6.12 | 0.50 | 6.4 | 93.3 | 0.3 | -6.25 | 0.75 | 0.60 | — | 4.2 | 0.004 | 0.72 | 0.0 | 0.04 | 10.44 | 0.00 | 2.206 | 7.12 | 0.00 | 7.5 | 92.4 | 0.1 | -0.07 | 0.98 | 0.84 | 0.77 | — | 22765 | 3366 | 1 | 0 | 221 | 0 | 0 | logfile |
✔ | 6H4N | 0137 | 2024-03-23 | 2018-07-22 | 3.0 | 3.20 | — | 3.1 | 0.007 | 0.96 | 4.0 | 0.05 | 22.67 | 0.01 | 0.418 | 5.99 | 0.74 | 10.1 | 89.4 | 0.5 | -4.18 | 0.86 | 0.87 | 3.31 | 3.1 | 0.004 | 0.65 | 0.0 | 0.04 | 22.94 | 0.00 | 1.983 | 11.38 | 4.92 | 9.1 | 90.7 | 0.2 | -1.42 | 1.21 | 0.87 | 0.90 | 2.51 | 147282 | 6188 | 57 | 4636 | 0 | 0 | 0 | logfile |
✔ | 8SEX | 40432 | 2024-03-18 | 2023-04-10 | 2.84 | 2.99 | 2.84 | 3.0 | 0.005 | 0.56 | 0.0 | 0.04 | 12.78 | 0.01 | 0.419 | 6.47 | 2.15 | 2.8 | 97.1 | 0.2 | 1.60 | 0.63 | 0.81 | 2.20 | 3.0 | 0.003 | 0.50 | 0.0 | 0.04 | 16.24 | 0.00 | 2.230 | 6.05 | 3.49 | 1.8 | 98.1 | 0.2 | 2.17 | 0.53 | 0.64 | 0.83 | 2.05 | 20568 | 2504 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 6H05 | 0108 | 2024-03-24 | 2018-07-06 | 2.9 | 3.15 | — | 3.5 | 0.016 | 1.09 | 0.0 | 0.07 | 9.74 | 0.01 | 0.426 | 17.80 | 0.00 | 8.5 | 91.5 | 0.0 | -5.50 | 0.36 | 0.13 | 0.50 | 3.1 | 0.003 | 0.86 | 0.0 | 0.05 | 15.34 | 0.01 | 2.128 | 15.29 | 2.09 | 4.2 | 95.8 | 0.0 | -1.19 | 1.59 | 0.57 | 0.46 | 0.82 | 44544 | 5664 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6FVW | 4322 | 2024-03-11 | 2018-03-05 | 4.5 | 4.60 | — | 4.6 | 0.035 | 3.52 | 888.0 | 0.20 | 17.66 | 0.03 | 0.436 | 3.52 | 2.98 | 5.7 | 92.3 | 2.0 | -2.29 | 0.50 | 0.54 | — | 4.5 | 0.004 | 0.84 | 0.0 | 0.05 | 15.00 | 0.00 | 1.910 | 18.23 | 0.07 | 4.6 | 95.2 | 0.2 | -0.55 | 2.32 | 0.55 | 0.77 | — | 110594 | 14032 | 59 | 0 | 12 | 20 | 0 | logfile |
✔ | 7UEG | 26474 | 2024-03-25 | 2022-03-21 | 4.0 | 4.46 | 4.14 | 4.2 | 0.034 | 0.79 | 6.0 | 0.05 | 12.16 | 0.01 | 0.436 | 24.88 | 0.00 | 8.9 | 90.9 | 0.2 | -2.77 | 0.67 | 0.78 | — | 4.1 | 0.032 | 0.87 | 4.0 | 0.05 | 14.04 | 0.01 | 1.818 | 22.65 | 1.59 | 10.8 | 89.0 | 0.3 | -2.73 | 1.25 | 0.68 | 0.82 | — | 49968 | 6480 | 36 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SVU | 25453 | 2024-03-20 | 2021-11-19 | 3.5 | 2.79 | 3.45 | 3.4 | 0.020 | 1.92 | 12.0 | 0.11 | 15.10 | 0.01 | 0.437 | 14.62 | 0.42 | 2.3 | 97.6 | 0.2 | -0.41 | 0.73 | 0.74 | 1.30 | 3.4 | 0.003 | 0.72 | 0.0 | 0.04 | 19.05 | 0.00 | 1.929 | 9.66 | 3.33 | 3.4 | 96.6 | 0.0 | 0.86 | 1.67 | 0.74 | 0.80 | 1.42 | 28015 | 3283 | 35 | 56 | 22 | 0 | 0 | logfile |
✔ | 8B11 | 15799 | 2024-03-03 | 2022-09-08 | 2.52 | 2.32 | 2.54 | 2.3 | 0.005 | 0.71 | 0.0 | 0.05 | 17.25 | 0.00 | 0.439 | 16.54 | 1.18 | 1.4 | 98.6 | 0.0 | -0.06 | 0.68 | 0.88 | 4.07 | 2.3 | 0.004 | 0.64 | 0.0 | 0.04 | 18.08 | 0.00 | 2.107 | 9.34 | 4.63 | 1.0 | 99.0 | 0.0 | 0.16 | 2.80 | 0.67 | 0.88 | 4.42 | 157440 | 21600 | 480 | 0 | 0 | 2700 | 0 | logfile |
✔ | 7ACR | 11718 | 2024-03-27 | 2020-09-11 | 3.44 | 3.72 | 3.11 | 2.6 | 0.003 | 0.65 | 21.0 | 0.04 | 23.55 | 0.02 | 0.444 | 14.05 | 1.77 | 5.3 | 94.3 | 0.4 | -1.02 | 0.87 | 0.78 | 1.12 | 2.5 | 0.004 | 0.70 | 0.0 | 0.04 | 23.96 | 0.01 | 1.051 | 19.40 | 4.59 | 7.8 | 92.1 | 0.1 | -1.60 | 1.63 | 0.89 | 0.84 | 1.23 | 151668 | 5858 | 66 | 4920 | 214 | 0 | 0 | logfile |
✔ | 8Bi4 | 16076 | 2024-03-22 | 2022-11-01 | 4.3 | 4.52 | 4.39 | 4.5 | 0.004 | 0.97 | 0.0 | 0.05 | 11.50 | 0.01 | 0.452 | 10.80 | 0.14 | 4.0 | 95.6 | 0.3 | -0.49 | 0.64 | 0.81 | — | 4.5 | 0.004 | 0.75 | 0.0 | 0.05 | 13.48 | 0.00 | 2.050 | 8.51 | 0.04 | 4.9 | 95.1 | 0.0 | -0.55 | 1.64 | 0.65 | 0.83 | — | 145200 | 19404 | 132 | 0 | 0 | 0 | 0 | logfile |
✘ | 7ZGK | 14708 | 2024-03-16 | 2022-04-03 | 3.59 | 4.63 | 3.57 | 3.7 | 0.002 | 0.45 | 0.0 | 0.04 | 13.81 | 0.00 | 0.454 | 5.10 | 0.46 | 2.2 | 97.6 | 0.2 | 1.65 | 0.73 | 0.55 | 1.45 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13639 | 1723 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6i1X | 0326 | 2024-03-11 | 2018-10-30 | 3.7 | 3.83 | — | 3.8 | 0.013 | 1.81 | 34.0 | 0.10 | 14.94 | 0.01 | 0.458 | 50.06 | 4.35 | 7.5 | 90.6 | 1.9 | -3.51 | 0.50 | 0.32 | 0.28 | 3.8 | 0.003 | 0.77 | 0.0 | 0.05 | 16.50 | 0.00 | 2.113 | 17.73 | 2.99 | 3.9 | 95.9 | 0.3 | -1.11 | 1.03 | 0.65 | 0.61 | 0.90 | 54915 | 7290 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 7B70 | 12063 | 2024-03-17 | 2020-12-09 | 4.0 | 4.08 | — | 3.4 | 0.008 | 1.13 | 3.0 | 0.06 | 15.94 | 0.01 | 0.463 | 43.27 | 4.66 | 11.9 | 87.8 | 0.2 | -2.44 | 0.79 | 0.66 | — | 3.2 | 0.004 | 0.83 | 0.0 | 0.05 | 16.49 | 0.00 | 2.109 | 31.68 | 2.52 | 8.1 | 91.9 | 0.0 | -0.88 | 0.93 | 0.82 | 0.76 | — | 17084 | 2112 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SSZ | 25417 | 2024-03-16 | 2021-11-11 | 3.25 | 3.49 | — | 3.5 | 0.014 | 1.70 | 20.0 | 0.12 | 14.90 | 0.01 | 0.467 | 7.21 | 6.31 | 5.5 | 94.5 | 0.0 | -2.29 | 0.56 | 0.79 | 3.16 | 3.5 | 0.003 | 0.60 | 0.0 | 0.04 | 15.55 | 0.00 | 2.230 | 5.73 | 2.12 | 4.1 | 95.9 | 0.0 | 0.92 | 0.57 | 0.70 | 0.83 | 3.69 | 15283 | 1908 | 9 | 0 | 3 | 0 | 0 | logfile |
✔ | 6XJA | 22204 | 2024-03-17 | 2020-06-23 | 4.0 | 4.11 | — | 3.7 | 0.023 | 1.93 | 31.0 | 0.12 | 18.04 | 0.01 | 0.468 | 73.73 | 18.43 | 6.1 | 92.2 | 1.7 | -1.93 | 0.69 | 0.54 | — | 3.7 | 0.005 | 1.04 | 2.0 | 0.06 | 17.15 | 0.01 | 1.719 | 27.22 | 5.74 | 8.5 | 91.4 | 0.2 | -2.42 | 1.96 | 0.75 | 0.67 | — | 16441 | 2156 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 5Y4o | 6805 | 2024-03-15 | 2017-08-04 | 3.8 | 3.55 | — | 3.6 | 0.022 | 2.44 | 28.0 | 0.12 | 19.88 | 0.02 | 0.471 | 78.50 | 20.31 | 7.8 | 87.8 | 4.5 | -2.08 | 0.55 | 0.62 | 0.20 | 3.6 | 0.003 | 0.76 | 0.0 | 0.04 | 17.30 | 0.00 | 2.069 | 13.36 | 5.80 | 7.8 | 91.5 | 0.6 | -0.34 | 1.75 | 0.59 | 0.73 | 1.09 | 12341 | 1561 | 7 | 0 | 0 | 0 | 0 | logfile |