The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5o4U | 3746 | 2022-12-15 | 2017-05-31 | 4.2 | 4.27 | 4.23 | 4.3 | 0.007 | 1.26 | 2.0 | 0.08 | 11.28 | 0.01 | 0.586 | 16.09 | 1.75 | 17.3 | 82.7 | 0.0 | -4.67 | 0.39 | 0.70 | — | 4.2 | 0.004 | 0.81 | 0.0 | 0.06 | 12.48 | 0.01 | 2.114 | 17.13 | 0.04 | 15.9 | 84.1 | 0.0 | -2.89 | 1.34 | 0.45 | 0.75 | — | 24528 | 3312 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N30 | 9335 | 2022-12-19 | 2018-11-14 | 3.2 | 3.45 | 3.17 | 3.4 | 0.011 | 1.27 | 10.0 | 0.07 | 10.68 | 0.01 | 0.590 | 11.93 | 0.78 | 4.1 | 95.8 | 0.2 | -2.69 | 0.63 | 0.73 | 4.10 | 3.4 | 0.003 | 0.71 | 0.0 | 0.05 | 13.87 | 0.00 | 1.930 | 11.42 | 0.35 | 3.9 | 96.1 | 0.0 | 0.56 | 1.19 | 0.70 | 0.85 | 3.10 | 34851 | 4694 | 27 | 0 | 26 | 0 | 0 | logfile |
✔ | 7PBX | 13308 | 2022-12-12 | 2021-08-02 | 3.43 | 3.70 | 3.43 | 3.1 | 0.032 | 2.53 | 206.0 | 0.21 | 19.43 | 0.02 | 0.597 | 32.75 | 11.71 | 3.1 | 95.3 | 1.6 | 1.29 | 0.69 | 0.65 | 1.83 | 3.1 | 0.008 | 1.25 | 23.0 | 0.06 | 17.52 | 0.01 | 1.506 | 26.92 | 0.10 | 3.3 | 96.2 | 0.4 | 0.56 | 1.28 | 0.90 | 0.86 | 1.97 | 59472 | 8015 | 35 | 0 | 28 | 0 | 0 | logfile |
✔ | 6MLQ | 9140 | 2022-12-12 | 2018-09-27 | 4.2 | 4.98 | — | 4.9 | 0.008 | 1.08 | 0.0 | 0.06 | 12.96 | 0.01 | 0.597 | 14.33 | 1.54 | 9.6 | 90.4 | 0.0 | -4.37 | 0.74 | 0.77 | — | 4.9 | 0.003 | 0.81 | 0.0 | 0.05 | 13.86 | 0.00 | 1.845 | 21.62 | 0.20 | 9.2 | 90.8 | 0.0 | -1.39 | 1.11 | 0.72 | 0.76 | — | 9197 | 1164 | 6 | 1 | 5 | 0 | 0 | logfile |
✔ | 7WCo | 32426 | 2022-12-12 | 2021-12-20 | 3.8 | 3.90 | — | 3.9 | 0.008 | 1.13 | 0.0 | 0.06 | 11.02 | 0.01 | 0.599 | 4.28 | 0.53 | 14.2 | 85.8 | 0.0 | -5.43 | 0.28 | 0.77 | 2.77 | 3.9 | 0.003 | 0.73 | 0.0 | 0.04 | 15.01 | 0.01 | 2.177 | 8.75 | 1.50 | 8.1 | 91.9 | 0.0 | -2.37 | 1.57 | 0.30 | 0.82 | 2.80 | 10740 | 1434 | 18 | 0 | 0 | 0 | 0 | logfile |
✘ | 5G05 | 3388 | 2022-12-19 | 2016-03-16 | 3.4 | 3.84 | — | 3.5 | 0.016 | 1.81 | 55.0 | 0.10 | 18.98 | 0.01 | 0.612 | 56.80 | 17.76 | 4.5 | 93.6 | 1.8 | -0.14 | 0.85 | 0.76 | 1.42 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 63181 | 8027 | 21 | 0 | 3 | 0 | 0 | logfile |
✔ | 5LMX | 4088 | 2022-12-16 | 2016-08-02 | 4.9 | 5.64 | — | 4.9 | 0.011 | 1.55 | 0.0 | 0.06 | 18.69 | 0.01 | 0.614 | 16.63 | 8.43 | 6.5 | 92.9 | 0.6 | -2.70 | 0.80 | 0.62 | — | 4.9 | 0.003 | 0.74 | 0.0 | 0.04 | 14.47 | 0.00 | 2.028 | 18.19 | 0.03 | 4.5 | 95.5 | 0.1 | -0.23 | 1.35 | 0.87 | 0.79 | — | 31118 | 3918 | 19 | 0 | 6 | 0 | 0 | logfile |
✔ | 7NAT | 12247 | 2022-12-22 | 2021-01-25 | 3.59 | 4.72 | 3.68 | 2.6 | 0.009 | 0.84 | 6.0 | 0.05 | 15.98 | 0.02 | 0.616 | 27.72 | 0.00 | 7.4 | 92.6 | 0.0 | -3.28 | 0.90 | 0.81 | 0.72 | 2.5 | 0.006 | 0.76 | 0.0 | 0.04 | 16.82 | 0.01 | 1.772 | 35.30 | 0.94 | 5.8 | 94.2 | 0.0 | -1.47 | 1.33 | 0.92 | 0.87 | 0.56 | 50921 | 2562 | 25 | 1430 | 66 | 0 | 0 | logfile |
✔ | 7Z6S | 14529 | 2022-12-15 | 2022-03-14 | 2.9 | 3.44 | 2.81 | 3.4 | 0.006 | 0.85 | 0.0 | 0.05 | 13.98 | 0.00 | 0.624 | 15.56 | 3.95 | 4.3 | 95.6 | 0.1 | -1.15 | 0.40 | 0.48 | 0.80 | 3.3 | 0.005 | 0.85 | 0.0 | 0.05 | 17.73 | 0.01 | 1.843 | 20.26 | 3.56 | 4.0 | 96.0 | 0.0 | -0.74 | 1.37 | 0.51 | 0.77 | 1.51 | 19134 | 2392 | 12 | 2 | 6 | 0 | 0 | logfile |
✔ | 6QW6 | 4658 | 2022-12-16 | 2019-03-05 | 2.92 | 3.02 | — | 3.0 | 0.010 | 1.21 | 14.0 | 0.07 | 15.88 | 0.01 | 0.644 | 10.69 | 1.79 | 5.1 | 94.5 | 0.4 | -3.43 | 0.62 | 0.67 | 2.44 | 3.0 | 0.003 | 0.69 | 0.0 | 0.04 | 17.37 | 0.00 | 1.926 | 16.49 | 2.17 | 4.0 | 96.0 | 0.0 | -0.59 | 0.81 | 0.68 | 0.75 | 2.30 | 89236 | 10350 | 42 | 271 | 5 | 0 | 0 | logfile |
✔ | 7PBJ | 13293 | 2022-12-12 | 2021-08-02 | 3.4 | 3.54 | 3.40 | 3.2 | 0.018 | 2.20 | 140.0 | 0.13 | 19.50 | 0.01 | 0.650 | 29.74 | 11.71 | 2.5 | 96.9 | 0.6 | 1.69 | 0.71 | 0.67 | 2.07 | 3.2 | 0.004 | 0.71 | 0.0 | 0.04 | 17.39 | 0.00 | 1.884 | 14.06 | 0.23 | 3.5 | 96.5 | 0.1 | 0.95 | 3.41 | 0.88 | 0.86 | 2.05 | 59486 | 8015 | 42 | 0 | 28 | 14 | 0 | logfile |
✔ | 5MPD | 3534 | 2022-12-21 | 2016-12-16 | 4.1 | 4.14 | — | 4.1 | 0.035 | 3.40 | 330.0 | 0.20 | 17.76 | 0.03 | 0.656 | 3.85 | 2.78 | 5.6 | 92.3 | 2.1 | -2.14 | 0.21 | 0.37 | — | 4.1 | 0.004 | 0.79 | 0.0 | 0.04 | 15.38 | 0.00 | 2.021 | 16.92 | 0.04 | 5.6 | 94.2 | 0.2 | -0.45 | 1.30 | 0.27 | 0.61 | — | 40974 | 5142 | 13 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BoH | 12243 | 2022-12-22 | 2021-01-25 | 2.82 | 3.09 | 2.90 | 2.8 | 0.006 | 0.62 | 4.0 | 0.04 | 13.89 | 0.02 | 0.657 | 6.33 | 0.00 | 3.3 | 96.7 | 0.0 | -1.47 | 0.82 | 0.80 | 2.52 | 2.8 | 0.004 | 0.66 | 0.0 | 0.03 | 14.91 | 0.01 | 1.164 | 12.55 | 2.38 | 3.8 | 96.2 | 0.0 | 0.09 | 0.60 | 0.87 | 0.90 | 2.21 | 52154 | 2445 | 25 | 1527 | 157 | 0 | 0 | logfile |
✔ | 6N1H | 8902 | 2022-12-12 | 2018-11-08 | 3.17 | 3.22 | — | 3.2 | 0.006 | 1.13 | 0.0 | 0.06 | 12.23 | 0.01 | 0.657 | 32.07 | 3.97 | 7.4 | 92.6 | 0.0 | -7.22 | 0.39 | 0.46 | 0.05 | 3.2 | 0.003 | 0.68 | 0.0 | 0.04 | 17.82 | 0.00 | 2.142 | 10.27 | 2.79 | 6.7 | 93.3 | 0.0 | 0.79 | 4.74 | 0.62 | 0.84 | 1.69 | 10991 | 1328 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 5G5L | 3439 | 2022-12-19 | 2016-05-26 | 4.8 | 5.08 | — | 4.8 | 0.010 | 1.38 | 14.0 | 0.09 | 16.60 | 0.01 | 0.675 | 31.29 | 7.76 | 6.0 | 92.2 | 1.8 | -2.38 | 0.81 | 0.71 | — | 4.8 | 0.005 | 0.79 | 0.0 | 0.04 | 13.56 | 0.00 | 1.865 | 22.38 | 0.00 | 4.4 | 95.5 | 0.1 | 0.31 | 2.95 | 0.86 | 0.83 | — | 37349 | 4686 | 20 | 0 | 7 | 0 | 0 | logfile |
✔ | 5MQ0 | 3541 | 2022-12-15 | 2016-12-19 | 4.17 | 4.40 | — | 4.2 | 0.010 | 1.54 | 21.0 | 0.11 | 14.99 | 0.01 | 0.679 | 7.94 | 2.73 | 7.7 | 91.4 | 0.9 | -2.01 | 0.68 | 0.56 | — | 4.0 | 0.004 | 0.72 | 0.0 | 0.04 | 14.56 | 0.00 | 1.850 | 20.19 | 0.02 | 6.6 | 93.3 | 0.1 | 0.06 | 2.11 | 0.74 | 0.74 | — | 77441 | 9673 | 52 | 448 | 99 | 0 | 0 | logfile |
✔ | 6i0Y | 0322 | 2022-12-16 | 2018-10-26 | 3.2 | 4.80 | — | 4.7 | 0.010 | 1.49 | 8.0 | 0.07 | 15.55 | 0.01 | 0.682 | 13.08 | 11.41 | 16.0 | 77.5 | 6.5 | -5.00 | 0.59 | 0.58 | 0.26 | 4.7 | 0.007 | 0.90 | 0.0 | 0.04 | 16.25 | 0.01 | 0.951 | 24.84 | 1.25 | 14.6 | 83.4 | 2.0 | -2.93 | 1.61 | 0.61 | 0.73 | 0.89 | 93619 | 3551 | 48 | 3049 | 144 | 439 | 0 | logfile |
✘ | 6HWH | 0289 | 2022-12-20 | 2018-10-12 | 3.3 | 3.56 | — | 3.5 | 0.012 | 1.33 | 1.0 | 0.07 | 12.95 | 0.01 | 0.691 | 7.86 | 0.51 | 9.4 | 90.5 | 0.1 | -5.53 | 0.71 | 0.82 | 4.01 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 40632 | 4916 | 40 | 0 | 420 | 0 | 0 | logfile |
✔ | 5A0Q | 2981 | 2022-12-21 | 2015-04-22 | 3.5 | 3.34 | — | 3.3 | 0.019 | 2.22 | 14.0 | 0.11 | 15.42 | 0.02 | 0.702 | 33.84 | 1.99 | 4.5 | 95.1 | 0.4 | -3.18 | 0.60 | 0.61 | 1.82 | 3.3 | 0.005 | 0.86 | 0.0 | 0.05 | 17.73 | 0.01 | 2.106 | 22.39 | 1.13 | 5.3 | 94.5 | 0.1 | -1.70 | 0.97 | 0.64 | 0.64 | 1.12 | 43448 | 5582 | 34 | 0 | 6 | 0 | 0 | logfile |
✔ | 6RPL | 4978 | 2022-12-17 | 2019-05-14 | 3.85 | 3.98 | — | 3.9 | 0.007 | 0.95 | 0.0 | 0.06 | 14.56 | 0.01 | 0.703 | 18.70 | 0.60 | 12.3 | 87.7 | 0.0 | -4.26 | 0.75 | 0.83 | 3.13 | 3.9 | 0.004 | 0.68 | 0.0 | 0.05 | 16.27 | 0.00 | 2.159 | 12.51 | 0.54 | 13.1 | 86.9 | 0.0 | -3.07 | 0.84 | 0.76 | 0.84 | 2.29 | 93960 | 11340 | 60 | 0 | 0 | 0 | 0 | logfile |