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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7T3i | 25659 | 2024-03-20 | 2021-12-08 | 4.3 | 4.36 | — | 4.3 | 0.003 | 0.59 | 0.0 | 0.04 | 13.81 | 0.00 | 2.101 | 11.21 | 0.07 | 5.7 | 94.1 | 0.2 | 0.58 | 0.80 | 0.82 | — | 4.3 | 0.003 | 0.60 | 0.0 | 0.04 | 13.81 | 0.00 | 2.131 | 12.68 | 0.04 | 7.1 | 92.7 | 0.2 | 0.71 | 0.43 | 0.80 | 0.83 | — | 26799 | 3437 | 12 | 0 | 36 | 0 | 0 | logfile |
✔ | 7P4i | 13193 | 2024-03-14 | 2021-07-11 | 4.2 | 5.62 | — | 4.1 | 0.003 | 0.76 | 0.0 | 0.04 | 13.10 | 0.00 | 2.168 | 11.83 | 0.00 | 5.7 | 94.3 | 0.0 | -0.54 | 0.61 | 0.84 | — | 4.2 | 0.003 | 0.71 | 0.0 | 0.04 | 13.67 | 0.00 | 2.237 | 11.32 | 0.00 | 5.3 | 94.7 | 0.0 | 0.65 | 0.93 | 0.61 | 0.86 | — | 9510 | 1284 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Q0X | 20555 | 2024-03-15 | 2019-08-02 | 4.2 | 4.30 | — | 4.2 | 0.007 | 0.88 | 0.0 | 0.05 | 17.07 | 0.00 | 2.139 | 24.04 | 1.21 | 8.1 | 91.9 | 0.0 | -3.83 | 0.68 | 0.72 | — | 4.2 | 0.004 | 0.75 | 0.0 | 0.04 | 16.07 | 0.00 | 2.160 | 18.57 | 0.00 | 6.7 | 93.3 | 0.0 | 0.10 | 1.38 | 0.67 | 0.72 | — | 12468 | 1492 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YG0 | 33803 | 2024-03-16 | 2022-07-09 | 3.75 | 4.38 | 3.91 | 6.5 | 0.005 | 0.93 | 1.0 | 0.05 | 14.36 | 0.00 | 2.222 | 25.32 | 1.19 | 8.0 | 92.0 | 0.0 | -1.07 | 0.59 | 0.54 | 0.45 | 3.8 | 0.004 | 0.93 | 0.0 | 0.05 | 16.38 | 0.00 | 2.041 | 31.49 | 4.76 | 6.2 | 93.7 | 0.1 | -0.83 | 2.20 | 0.67 | 0.75 | 0.41 | 13336 | 1708 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TJX | 25939 | 2024-03-18 | 2022-01-17 | 4.0 | 3.84 | 4.09 | 3.9 | 0.003 | 0.62 | 0.0 | 0.05 | 12.05 | 0.00 | 1.858 | 2.49 | 0.05 | 1.8 | 98.2 | 0.0 | 0.09 | 0.60 | 0.79 | — | 3.9 | 0.003 | 0.66 | 0.0 | 0.04 | 15.74 | 0.00 | 1.899 | 10.37 | 3.59 | 2.6 | 97.4 | 0.0 | 0.37 | 1.47 | 0.62 | 0.80 | — | 21663 | 3072 | 12 | 0 | 11 | 0 | 0 | logfile |
✔ | 3JD0 | 6631 | 2024-03-19 | 2016-03-28 | 3.47 | 3.93 | — | 3.8 | 0.012 | 0.82 | 0.0 | 0.05 | 10.31 | 0.00 | 1.989 | 15.40 | 0.00 | 13.3 | 85.9 | 0.8 | -5.89 | 0.85 | 0.82 | 3.48 | 3.8 | 0.003 | 0.69 | 0.0 | 0.04 | 14.35 | 0.00 | 2.146 | 13.49 | 0.60 | 4.8 | 95.1 | 0.1 | 0.70 | 2.53 | 0.85 | 0.86 | 2.27 | 23478 | 2976 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 7oH6 | 12895 | 2024-03-15 | 2021-05-09 | 3.0 | 3.69 | 3.20 | 3.6 | 0.003 | 1.13 | 0.0 | 0.04 | 12.69 | 0.00 | 1.720 | 4.93 | 1.20 | 4.0 | 96.0 | 0.0 | -2.49 | 0.65 | 0.74 | 2.83 | 3.6 | 0.004 | 0.66 | 0.0 | 0.04 | 14.17 | 0.00 | 1.427 | 8.52 | 2.23 | 3.7 | 96.2 | 0.1 | -0.55 | 1.22 | 0.65 | 0.76 | 2.27 | 11552 | 1414 | 7 | 0 | 10 | 2 | 0 | logfile |
✔ | 7QKo | 14048 | 2024-03-17 | 2021-12-18 | 2.9 | 3.22 | 3.03 | 3.2 | 0.006 | 0.84 | 0.0 | 0.05 | 18.35 | 0.00 | 2.242 | 8.07 | 1.25 | 1.9 | 98.1 | 0.0 | 0.18 | 0.58 | 0.76 | 3.35 | 3.2 | 0.003 | 0.56 | 0.0 | 0.04 | 15.46 | 0.00 | 2.213 | 7.69 | 3.09 | 2.7 | 97.3 | 0.0 | 0.67 | 0.39 | 0.61 | 0.80 | 3.11 | 17042 | 1996 | 17 | 0 | 49 | 0 | 0 | logfile |
✔ | 8DL0 | 27494 | 2024-03-18 | 2022-07-06 | 4.1 | 4.31 | 4.17 | 4.1 | 0.003 | 0.67 | 0.0 | 0.05 | 13.22 | 0.00 | 2.168 | 13.34 | 0.00 | 4.1 | 95.9 | 0.0 | 0.25 | 0.73 | 0.75 | — | 4.1 | 0.004 | 0.69 | 0.0 | 0.05 | 13.69 | 0.00 | 2.064 | 19.29 | 0.09 | 5.7 | 94.3 | 0.0 | -0.19 | 1.63 | 0.73 | 0.77 | — | 10377 | 1268 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QL6 | 14065 | 2024-03-17 | 2021-12-19 | 3.23 | 3.65 | 3.39 | 3.6 | 0.004 | 0.67 | 1.0 | 0.05 | 15.26 | 0.00 | 2.258 | 7.26 | 0.60 | 3.3 | 96.7 | 0.0 | 0.66 | 0.72 | 0.80 | 3.00 | 3.5 | 0.003 | 0.58 | 0.0 | 0.04 | 14.04 | 0.00 | 2.161 | 10.02 | 2.07 | 2.9 | 97.1 | 0.0 | 0.67 | 0.64 | 0.72 | 0.82 | 3.10 | 16617 | 1990 | 15 | 0 | 38 | 0 | 0 | logfile |
✘ | 7CH9 | 30372 | 2024-03-16 | 2020-07-05 | 3.5 | 3.92 | — | 3.8 | 0.005 | 0.82 | 0.0 | 0.04 | 18.11 | 0.00 | 2.032 | 18.63 | 10.34 | 9.6 | 90.4 | 0.0 | -4.56 | 0.69 | 0.78 | 0.63 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15978 | 2126 | 19 | 0 | 10 | 0 | 0 | logfile |
✔ | 8DNE | 27564 | 2024-03-15 | 2022-07-11 | 3.5 | 3.77 | 3.53 | 3.8 | 0.004 | 0.65 | 0.0 | 0.04 | 14.83 | 0.00 | 1.785 | 9.38 | 0.00 | 4.9 | 95.1 | 0.0 | -0.37 | 0.71 | 0.78 | 2.45 | 3.8 | 0.002 | 0.59 | 0.0 | 0.04 | 16.54 | 0.00 | 1.923 | 9.38 | 2.41 | 4.1 | 95.9 | 0.0 | -0.20 | 1.22 | 0.69 | 0.77 | 1.46 | 10281 | 1251 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 7UQY | 26702 | 2024-03-14 | 2022-04-20 | 3.0 | 2.33 | 2.95 | 2.1 | 0.003 | 0.59 | 0.0 | 0.04 | 13.64 | 0.00 | 2.197 | 10.04 | 0.00 | 5.0 | 95.0 | 0.0 | -0.18 | 0.76 | 0.70 | 3.53 | 2.0 | 0.004 | 0.67 | 0.0 | 0.05 | 15.56 | 0.00 | 2.072 | 13.74 | 1.92 | 5.0 | 95.0 | 0.0 | -0.38 | 0.42 | 0.76 | 0.76 | 3.23 | 9556 | 1167 | 4 | 1 | 3 | 0 | 0 | logfile |
✔ | 7K60 | 22685 | 2024-03-18 | 2020-09-17 | 3.12 | 3.33 | — | 3.2 | 0.004 | 0.64 | 0.0 | 0.04 | 26.55 | 0.00 | 2.175 | 9.32 | 0.09 | 2.0 | 98.0 | 0.0 | 0.43 | 0.74 | 0.73 | 1.70 | 3.2 | 0.005 | 0.65 | 0.0 | 0.04 | 27.34 | 0.00 | 2.035 | 11.09 | 2.90 | 3.3 | 96.7 | 0.0 | 0.53 | 0.54 | 0.76 | 0.78 | 1.85 | 18330 | 1298 | 13 | 394 | 0 | 0 | 0 | logfile |
✔ | 7SCK | 25037 | 2024-03-15 | 2021-09-28 | 2.8 | 2.26 | 2.83 | 2.1 | 0.005 | 0.61 | 0.0 | 0.05 | 13.39 | 0.00 | 1.744 | 9.55 | 0.36 | 5.5 | 94.5 | 0.0 | -0.14 | 0.75 | 0.73 | 3.35 | 2.1 | 0.004 | 0.70 | 0.0 | 0.05 | 15.24 | 0.01 | 2.101 | 13.00 | 1.80 | 4.9 | 95.1 | 0.0 | -0.51 | 0.55 | 0.77 | 0.77 | 2.83 | 10250 | 1240 | 6 | 2 | 9 | 0 | 0 | logfile |
✔ | 7PVD | 13667 | 2024-03-11 | 2021-10-02 | 3.7 | 3.80 | 2.77 | 3.7 | 0.007 | 0.83 | 0.0 | 0.05 | 18.68 | 0.00 | 2.134 | 13.11 | 0.32 | 3.9 | 96.1 | 0.0 | -1.16 | 0.69 | 0.67 | 1.54 | 3.7 | 0.004 | 0.76 | 0.0 | 0.04 | 16.07 | 0.00 | 2.121 | 15.35 | 2.57 | 5.2 | 94.8 | 0.0 | -0.25 | 0.87 | 0.73 | 0.74 | 1.48 | 8902 | 1035 | 22 | 0 | 43 | 0 | 0 | logfile |
✔ | 7PN1 | 13545 | 2024-03-15 | 2021-09-04 | 3.9 | 4.15 | 3.83 | 4.0 | 0.002 | 0.57 | 0.0 | 0.04 | 12.95 | 0.00 | 2.053 | 6.26 | 0.00 | 2.8 | 97.2 | 0.0 | 1.31 | 0.61 | 0.80 | 1.17 | 4.0 | 0.003 | 0.54 | 0.0 | 0.04 | 14.63 | 0.00 | 1.935 | 7.71 | 1.07 | 3.1 | 96.9 | 0.0 | 1.67 | 0.98 | 0.60 | 0.80 | 0.70 | 10384 | 657 | 1 | 0 | 0 | 0 | 5237 | logfile |
✔ | 7TJW | 25934 | 2024-03-19 | 2022-01-17 | 4.0 | 3.71 | 4.05 | 3.8 | 0.003 | 0.64 | 0.0 | 0.05 | 13.06 | 0.00 | 1.855 | 2.42 | 0.00 | 2.2 | 97.8 | 0.0 | 0.19 | 0.61 | 0.79 | — | 3.8 | 0.003 | 0.65 | 0.0 | 0.04 | 16.04 | 0.00 | 1.878 | 9.24 | 3.75 | 3.3 | 96.7 | 0.0 | 0.67 | 0.62 | 0.62 | 0.80 | — | 22500 | 3097 | 12 | 0 | 10 | 0 | 0 | logfile |
✔ | 7RQW | 24638 | 2024-03-22 | 2021-08-08 | 3.11 | 3.40 | — | 3.5 | 0.011 | 0.99 | 0.0 | 0.06 | 17.95 | 0.00 | 2.042 | 7.24 | 0.00 | 4.4 | 95.6 | 0.0 | 0.31 | 0.55 | 0.69 | 2.95 | 3.5 | 0.003 | 0.46 | 0.0 | 0.03 | 16.96 | 0.00 | 1.949 | 7.74 | 1.50 | 3.6 | 96.4 | 0.0 | 1.03 | 0.37 | 0.51 | 0.68 | 2.77 | 32984 | 2128 | 8 | 0 | 20 | 0 | 15804 | logfile |
✔ | 7RQU | 24636 | 2024-03-23 | 2021-08-08 | 3.05 | 3.32 | — | 3.3 | 0.012 | 1.15 | 0.0 | 0.06 | 22.09 | 0.00 | 2.334 | 3.79 | 0.00 | 3.2 | 96.8 | 0.0 | 1.69 | 0.63 | 0.76 | 2.73 | 3.3 | 0.003 | 0.46 | 0.0 | 0.03 | 15.88 | 0.00 | 2.362 | 3.22 | 1.38 | 3.7 | 96.3 | 0.0 | 1.91 | 0.28 | 0.64 | 0.80 | 2.64 | 35602 | 2416 | 8 | 0 | 38 | 0 | 16568 | logfile |