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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7UZU | 26918 | 2022-12-11 | 2022-05-09 | 2.3 | 2.23 | 2.31 | 2.2 | 0.003 | 0.57 | 0.0 | 0.04 | 17.47 | 0.01 | 2.124 | 3.96 | 0.52 | 3.1 | 96.9 | 0.0 | 1.73 | 0.60 | 0.87 | 5.53 | 2.2 | 0.002 | 0.48 | 0.0 | 0.03 | 17.63 | 0.00 | 2.121 | 4.92 | 1.03 | 3.5 | 96.5 | 0.0 | 2.86 | 0.19 | 0.58 | 0.87 | 5.61 | 7399 | 483 | 4 | 0 | 0 | 79 | 3655 | logfile |
✔ | 7oo8 | 13007 | 2022-12-13 | 2021-05-26 | 3.7 | 2.99 | 3.39 | 3.0 | 0.003 | 0.40 | 0.0 | 0.04 | 9.89 | 0.00 | 2.286 | 6.45 | 0.00 | 1.9 | 98.1 | 0.0 | 2.79 | 0.65 | 0.79 | 2.44 | 3.0 | 0.003 | 0.48 | 0.0 | 0.04 | 14.96 | 0.00 | 2.291 | 10.06 | 0.27 | 1.2 | 98.8 | 0.0 | 2.49 | 0.46 | 0.65 | 0.79 | 2.25 | 13923 | 1827 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MQF | 23945 | 2022-12-15 | 2021-05-05 | 2.88 | 2.74 | 2.86 | 2.8 | 0.006 | 0.72 | 0.0 | 0.06 | 11.73 | 0.00 | 2.175 | 1.47 | 0.00 | 0.5 | 99.5 | 0.0 | 1.24 | 0.72 | 0.87 | 6.16 | 2.7 | 0.003 | 0.48 | 0.0 | 0.04 | 13.44 | 0.00 | 2.256 | 3.06 | 0.00 | 1.0 | 99.0 | 0.0 | 1.02 | 0.44 | 0.78 | 0.91 | 5.71 | 12288 | 1608 | 16 | 16 | 0 | 0 | 0 | logfile |
✔ | 7USW | 26741 | 2022-12-13 | 2022-04-26 | 3.1 | 3.48 | 3.14 | 3.5 | 0.004 | 0.78 | 0.0 | 0.04 | 15.89 | 0.01 | 2.254 | 7.16 | 0.21 | 3.1 | 96.9 | 0.0 | 2.17 | 0.63 | 0.80 | 2.13 | 3.5 | 0.002 | 0.48 | 0.0 | 0.04 | 16.03 | 0.00 | 2.253 | 5.38 | 0.41 | 3.1 | 96.9 | 0.0 | 2.30 | 0.25 | 0.63 | 0.83 | 2.06 | 14322 | 1676 | 12 | 0 | 68 | 0 | 0 | logfile |
✔ | 7oZV | 13138 | 2022-12-12 | 2021-06-28 | 3.2 | 3.08 | 3.16 | 3.3 | 0.007 | 0.58 | 0.0 | 0.04 | 13.29 | 0.01 | 2.202 | 8.59 | 0.00 | 2.6 | 97.4 | 0.0 | -0.22 | 0.64 | 0.79 | 3.09 | 3.3 | 0.003 | 0.48 | 0.0 | 0.04 | 15.36 | 0.00 | 2.139 | 8.29 | 0.00 | 2.3 | 97.7 | 0.0 | -0.10 | 1.89 | 0.72 | 0.83 | 2.74 | 8409 | 991 | 6 | 22 | 2 | 0 | 0 | logfile |
✔ | 7YQC | 34023 | 2022-12-12 | 2022-08-06 | 2.82 | 2.99 | 2.80 | 3.0 | 0.013 | 1.86 | 24.0 | 0.13 | 16.60 | 0.01 | 2.497 | 5.68 | 9.34 | 1.3 | 98.7 | 0.0 | 3.07 | 0.65 | 0.81 | 2.22 | 3.0 | 0.003 | 0.48 | 0.0 | 0.04 | 17.66 | 0.00 | 2.284 | 6.24 | 3.86 | 1.3 | 98.7 | 0.0 | 3.57 | 0.49 | 0.64 | 0.82 | 2.18 | 11396 | 1386 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZW1 | 14991 | 2022-12-12 | 2022-05-17 | 3.7 | 4.52 | 3.66 | 3.9 | 0.002 | 0.50 | 0.0 | 0.03 | 17.28 | 0.00 | 2.021 | 7.62 | 0.16 | 3.1 | 96.9 | 0.0 | 3.09 | 0.65 | 0.80 | 1.73 | 4.0 | 0.002 | 0.48 | 0.0 | 0.03 | 17.37 | 0.00 | 2.034 | 8.22 | 0.32 | 2.3 | 97.7 | 0.0 | 3.27 | 0.70 | 0.65 | 0.79 | 1.44 | 11807 | 760 | 3 | 0 | 0 | 0 | 5883 | logfile |
✔ | 7oo0 | 13003 | 2022-12-13 | 2021-05-26 | 3.1 | 3.05 | 2.96 | 3.1 | 0.012 | 1.13 | 0.0 | 0.07 | 12.80 | 0.00 | 2.131 | 7.27 | 0.00 | 3.1 | 96.9 | 0.0 | -1.80 | 0.61 | 0.78 | 2.85 | 3.1 | 0.003 | 0.48 | 0.0 | 0.04 | 13.87 | 0.00 | 2.313 | 6.05 | 0.00 | 1.5 | 98.5 | 0.0 | 1.59 | 1.54 | 0.61 | 0.79 | 2.28 | 16016 | 1834 | 14 | 0 | 56 | 0 | 0 | logfile |
✔ | 7NKQ | 12446 | 2022-12-12 | 2021-02-18 | 2.98 | 3.25 | — | 3.1 | 0.004 | 0.49 | 0.0 | 0.04 | 13.52 | 0.00 | 2.018 | 7.16 | 0.00 | 2.7 | 97.3 | 0.0 | 1.39 | 0.81 | 0.81 | 2.98 | 3.1 | 0.003 | 0.48 | 0.0 | 0.04 | 15.76 | 0.00 | 2.010 | 7.06 | 0.87 | 2.3 | 97.7 | 0.0 | 2.24 | 0.31 | 0.82 | 0.84 | 2.58 | 10621 | 714 | 8 | 0 | 0 | 0 | 5312 | logfile |
✔ | 6XKY | 22229 | 2022-12-20 | 2020-06-27 | 3.2 | 3.13 | 3.17 | 3.2 | 0.006 | 0.55 | 0.0 | 0.03 | 10.04 | 0.00 | 1.588 | 4.66 | 0.48 | 1.5 | 98.5 | 0.0 | 2.67 | 0.52 | 0.87 | 2.05 | 3.2 | 0.004 | 0.49 | 0.0 | 0.03 | 14.28 | 0.00 | 2.145 | 4.55 | 0.33 | 1.9 | 98.1 | 0.0 | 3.67 | 0.50 | 0.52 | 0.89 | 1.91 | 38760 | 5420 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TiK | 25912 | 2022-12-11 | 2022-01-13 | 2.4 | 2.38 | — | 2.0 | 0.007 | 0.49 | 0.0 | 0.04 | 16.31 | 0.00 | 2.218 | 8.52 | 0.00 | 4.6 | 95.4 | 0.0 | 1.31 | 0.77 | 0.80 | 1.31 | 2.0 | 0.004 | 0.49 | 0.0 | 0.04 | 16.44 | 0.00 | 2.228 | 10.65 | 1.01 | 0.3 | 99.7 | 0.0 | 5.49 | 0.93 | 0.79 | 0.81 | 1.38 | 2565 | 339 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oCA | 12802 | 2022-12-16 | 2021-04-26 | 3.4 | 3.03 | — | 3.2 | 0.009 | 0.95 | 0.0 | 0.04 | 14.76 | 0.00 | 2.080 | 4.67 | 0.15 | 3.5 | 96.5 | 0.0 | 0.20 | 0.72 | 0.80 | 3.80 | 3.1 | 0.003 | 0.49 | 0.0 | 0.04 | 15.33 | 0.00 | 2.230 | 4.88 | 0.23 | 1.8 | 98.2 | 0.0 | 1.52 | 0.44 | 0.75 | 0.85 | 3.24 | 29294 | 3802 | 22 | 0 | 72 | 0 | 0 | logfile |
✔ | 8DK2 | 27481 | 2022-12-15 | 2022-07-01 | 4.1 | 4.81 | 4.17 | 4.1 | 0.002 | 0.47 | 0.0 | 0.04 | 13.54 | 0.00 | 1.988 | 7.74 | 2.88 | 3.7 | 96.3 | 0.0 | 2.05 | 0.84 | 0.80 | — | 4.1 | 0.002 | 0.49 | 0.0 | 0.04 | 14.04 | 0.00 | 2.028 | 7.44 | 0.00 | 3.7 | 96.3 | 0.0 | 2.10 | 0.60 | 0.84 | 0.80 | — | 23727 | 2840 | 12 | 52 | 4 | 0 | 0 | logfile |
✔ | 7NG9 | 12310 | 2022-12-14 | 2021-02-08 | 3.3 | 3.48 | 3.33 | 3.5 | 0.007 | 0.48 | 0.0 | 0.04 | 14.72 | 0.00 | 2.250 | 4.23 | 0.85 | 3.6 | 96.4 | 0.0 | -0.87 | 0.62 | 0.80 | 4.09 | 3.5 | 0.003 | 0.49 | 0.0 | 0.03 | 15.82 | 0.00 | 2.122 | 6.92 | 0.09 | 2.5 | 97.5 | 0.0 | 2.16 | 2.59 | 0.68 | 0.85 | 3.35 | 19368 | 1263 | 3 | 0 | 0 | 0 | 9615 | logfile |
✔ | 7P0Z | 13153 | 2022-12-13 | 2021-07-01 | 2.43 | 2.02 | 2.41 | 2.2 | 0.016 | 0.94 | 0.0 | 0.06 | 14.02 | 0.01 | 2.141 | 7.53 | 0.00 | 4.3 | 95.7 | 0.0 | 1.90 | 0.83 | 0.86 | 2.91 | 2.3 | 0.003 | 0.49 | 0.0 | 0.03 | 18.16 | 0.00 | 2.229 | 4.53 | 1.64 | 0.8 | 99.2 | 0.0 | 5.38 | 0.54 | 0.84 | 0.87 | 2.25 | 12873 | 1652 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UY6 | 26865 | 2022-12-14 | 2022-05-06 | 2.9 | 2.49 | 2.94 | 3.0 | 0.002 | 0.44 | 0.0 | 0.04 | 15.88 | 0.00 | 2.215 | 4.02 | 0.06 | 1.7 | 98.3 | 0.0 | 1.19 | 0.70 | 0.81 | 3.09 | 2.9 | 0.002 | 0.49 | 0.0 | 0.04 | 17.81 | 0.00 | 2.211 | 5.06 | 1.57 | 2.1 | 97.8 | 0.1 | 1.40 | 1.18 | 0.70 | 0.83 | 2.63 | 18746 | 1847 | 9 | 170 | 1 | 0 | 0 | logfile |
✔ | 8DEU | 27399 | 2022-12-16 | 2022-06-21 | 2.95 | 3.22 | 3.03 | 3.1 | 0.006 | 0.97 | 0.0 | 0.05 | 15.77 | 0.00 | 2.211 | 14.97 | 3.07 | 4.7 | 95.3 | 0.0 | -1.69 | 0.68 | 0.83 | 2.50 | 3.2 | 0.003 | 0.49 | 0.0 | 0.04 | 16.73 | 0.00 | 2.032 | 15.83 | 3.99 | 3.3 | 96.7 | 0.0 | 1.28 | 2.32 | 0.69 | 0.85 | 2.29 | 29088 | 3130 | 7 | 0 | 27 | 0 | 4959 | logfile |
✔ | 6U5P | 20652 | 2022-12-13 | 2019-08-28 | 3.3 | 3.44 | — | 3.4 | 0.006 | 0.75 | 0.0 | 0.05 | 14.37 | 0.00 | 2.236 | 3.96 | 0.43 | 4.4 | 95.6 | 0.0 | -3.37 | 0.70 | 0.83 | 2.56 | 3.4 | 0.002 | 0.49 | 0.0 | 0.05 | 16.15 | 0.00 | 2.100 | 5.40 | 0.50 | 2.8 | 97.2 | 0.0 | 0.25 | 0.46 | 0.65 | 0.83 | 2.09 | 13308 | 1776 | 24 | 0 | 24 | 8 | 0 | logfile |
✔ | 8CYA | 27072 | 2022-12-12 | 2022-05-23 | 2.7 | 3.50 | 2.73 | 3.0 | 0.002 | 0.44 | 0.0 | 0.04 | 11.93 | 0.00 | 1.935 | 6.86 | 0.06 | 4.8 | 95.0 | 0.2 | 0.52 | 0.83 | 0.75 | 1.85 | 3.1 | 0.003 | 0.49 | 0.0 | 0.04 | 13.01 | 0.00 | 1.985 | 10.09 | 0.44 | 5.0 | 94.9 | 0.2 | 0.12 | 0.39 | 0.85 | 0.79 | 2.18 | 57833 | 3681 | 29 | 0 | 88 | 0 | 27935 | logfile |
✔ | 6ZBJ | 11156 | 2022-12-20 | 2020-06-08 | 3.3 | 4.20 | 3.47 | 3.8 | 0.011 | 1.04 | 0.0 | 0.06 | 14.14 | 0.01 | 2.351 | 1.38 | 0.00 | 0.7 | 99.3 | 0.0 | -1.34 | 0.87 | 0.81 | 1.60 | 3.7 | 0.002 | 0.49 | 0.0 | 0.03 | 15.19 | 0.00 | 2.052 | 3.24 | 0.00 | 0.6 | 99.4 | 0.0 | 3.74 | 1.29 | 0.87 | 0.82 | 1.11 | 39212 | 2334 | 4 | 0 | 0 | 0 | 19864 | logfile |