The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7NAD | 24270 | 2023-07-18 | 2021-06-21 | 3.04 | 2.90 | 3.01 | 3.0 | 0.002 | 0.52 | 0.0 | 0.04 | 13.90 | 0.00 | 2.159 | 6.43 | 0.34 | 3.4 | 96.6 | 0.0 | 0.96 | 0.69 | 0.79 | 3.04 | 3.0 | 0.002 | 0.48 | 0.0 | 0.03 | 14.91 | 0.00 | 2.100 | 5.75 | 0.07 | 3.3 | 96.7 | 0.0 | 1.32 | 0.29 | 0.71 | 0.83 | 2.72 | 43123 | 3338 | 27 | 756 | 1 | 0 | 0 | logfile |
✔ | 8F7B | 28901 | 2023-07-08 | 2022-11-18 | 3.15 | 3.53 | 3.17 | 3.5 | 0.005 | 0.79 | 0.0 | 0.04 | 17.29 | 0.00 | 2.263 | 5.78 | 0.23 | 2.4 | 97.6 | 0.0 | 1.06 | 0.63 | 0.79 | 2.19 | 3.5 | 0.002 | 0.48 | 0.0 | 0.04 | 16.28 | 0.00 | 2.227 | 7.36 | 0.34 | 2.1 | 97.9 | 0.0 | 2.15 | 1.13 | 0.59 | 0.79 | 2.11 | 16166 | 1894 | 18 | 0 | 17 | 6 | 0 | logfile |
✔ | 7RH9 | 24458 | 2023-07-07 | 2021-07-16 | 2.61 | 2.09 | — | 2.5 | 0.003 | 0.57 | 0.0 | 0.04 | 13.27 | 0.01 | 2.214 | 5.79 | 0.00 | 1.3 | 98.7 | 0.0 | 1.30 | 0.64 | 0.84 | 4.07 | 2.5 | 0.002 | 0.48 | 0.0 | 0.04 | 15.63 | 0.00 | 2.149 | 8.70 | 0.81 | 1.2 | 98.8 | 0.0 | 2.64 | 0.90 | 0.63 | 0.86 | 4.00 | 14680 | 1792 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UG0 | 26482 | 2023-07-03 | 2022-03-23 | 2.55 | 3.24 | 2.49 | 3.1 | 0.002 | 0.45 | 0.0 | 0.04 | 10.60 | 0.00 | 2.287 | 2.34 | 0.00 | 1.0 | 99.0 | 0.0 | 2.00 | 0.56 | 0.90 | 3.59 | 3.0 | 0.003 | 0.48 | 0.0 | 0.04 | 12.53 | 0.00 | 2.211 | 4.52 | 0.62 | 1.0 | 99.0 | 0.0 | 3.92 | 1.26 | 0.53 | 0.87 | 2.10 | 3126 | 418 | 1 | 0 | 3 | 4 | 0 | logfile |
✔ | 8G9F | 29864 | 2023-07-17 | 2023-02-21 | 3.2 | 3.77 | 3.13 | 3.2 | 0.003 | 0.50 | 0.0 | 0.04 | 16.16 | 0.00 | 2.257 | 2.77 | 0.00 | 3.1 | 96.9 | 0.0 | 0.34 | 0.89 | 0.83 | 3.53 | 3.2 | 0.002 | 0.48 | 0.0 | 0.04 | 15.99 | 0.00 | 2.029 | 3.81 | 0.05 | 2.6 | 97.4 | 0.0 | 1.72 | 2.00 | 0.90 | 0.87 | 3.33 | 37540 | 2321 | 7 | 0 | 4 | 0 | 18758 | logfile |
✔ | 7XNV | 33327 | 2023-07-09 | 2022-04-29 | 3.4 | 3.18 | 3.11 | 3.2 | 0.005 | 1.07 | 0.0 | 0.05 | 16.87 | 0.00 | 2.213 | 7.73 | 0.90 | 1.0 | 98.4 | 0.6 | 0.24 | 0.69 | 0.85 | 2.90 | 3.2 | 0.003 | 0.48 | 0.0 | 0.04 | 16.78 | 0.00 | 2.243 | 5.32 | 0.21 | 1.1 | 98.9 | 0.0 | 2.46 | 0.40 | 0.70 | 0.88 | 2.37 | 18378 | 2088 | 24 | 0 | 114 | 0 | 0 | logfile |
✔ | 8A0E | 15052 | 2023-07-06 | 2022-05-27 | 2.8 | 3.09 | 2.92 | 3.0 | 0.003 | 0.60 | 0.0 | 0.04 | 13.10 | 0.00 | 2.176 | 2.58 | 0.00 | 1.7 | 98.3 | 0.0 | -0.22 | 0.76 | 0.89 | 4.52 | 3.0 | 0.002 | 0.48 | 0.0 | 0.04 | 15.33 | 0.00 | 2.194 | 2.70 | 0.55 | 1.5 | 98.5 | 0.0 | 0.08 | 0.31 | 0.74 | 0.90 | 3.82 | 12082 | 1526 | 9 | 0 | 7 | 0 | 0 | logfile |
✔ | 7STL | 25432 | 2023-07-12 | 2021-11-14 | 2.95 | 3.30 | — | 3.2 | 0.004 | 0.75 | 0.0 | 0.04 | 10.31 | 0.00 | 2.190 | 0.38 | 0.15 | 2.3 | 97.7 | 0.0 | 1.82 | 0.67 | 0.82 | 3.24 | 3.2 | 0.004 | 0.48 | 0.0 | 0.04 | 13.91 | 0.00 | 2.104 | 2.76 | 0.59 | 3.5 | 96.3 | 0.1 | 1.65 | 0.57 | 0.66 | 0.84 | 3.21 | 25668 | 1600 | 4 | 0 | 8 | 0 | 12568 | logfile |
✔ | 7VYQ | 32211 | 2023-07-08 | 2021-11-15 | 3.13 | 3.33 | — | 3.4 | 0.005 | 0.78 | 0.0 | 0.04 | 17.69 | 0.01 | 2.056 | 6.00 | 0.00 | 2.8 | 97.2 | 0.0 | -1.84 | 0.64 | 0.89 | 3.89 | 3.4 | 0.003 | 0.48 | 0.0 | 0.04 | 16.70 | 0.00 | 1.980 | 7.45 | 0.00 | 4.3 | 95.7 | 0.0 | -0.98 | 1.21 | 0.58 | 0.87 | 3.53 | 17080 | 1120 | 8 | 0 | 8 | 0 | 8340 | logfile |
✔ | 7K0Q | 22608 | 2023-07-04 | 2020-09-04 | 3.3 | 3.61 | — | 3.5 | 0.006 | 0.70 | 0.0 | 0.05 | 12.64 | 0.00 | 2.116 | 5.18 | 0.00 | 3.3 | 96.7 | 0.0 | 0.45 | 0.70 | 0.85 | 3.35 | 3.5 | 0.002 | 0.48 | 0.0 | 0.04 | 14.21 | 0.00 | 2.189 | 4.84 | 0.11 | 2.5 | 97.5 | 0.0 | 1.24 | 1.46 | 0.73 | 0.87 | 2.87 | 8778 | 1107 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 8BVQ | 16268 | 2023-07-12 | 2022-12-05 | 3.3 | 3.33 | 3.29 | 3.5 | 0.004 | 0.55 | 0.0 | 0.04 | 16.05 | 0.00 | 2.088 | 7.55 | 0.31 | 4.1 | 95.9 | 0.0 | -0.42 | 0.54 | 0.73 | 1.75 | 3.5 | 0.002 | 0.48 | 0.0 | 0.04 | 16.24 | 0.00 | 2.051 | 7.03 | 0.39 | 5.0 | 95.0 | 0.0 | -0.40 | 0.28 | 0.60 | 0.81 | 1.87 | 23125 | 1518 | 6 | 0 | 0 | 0 | 11250 | logfile |
✔ | 7ZDQ | 14666 | 2023-07-04 | 2022-03-29 | 3.2 | 2.77 | 3.10 | 2.9 | 0.003 | 0.56 | 0.0 | 0.04 | 15.22 | 0.00 | 2.212 | 6.47 | 0.15 | 2.3 | 97.7 | 0.0 | 1.48 | 0.71 | 0.81 | 3.08 | 3.1 | 0.002 | 0.48 | 0.0 | 0.04 | 16.22 | 0.00 | 2.230 | 5.65 | 0.15 | 2.5 | 97.5 | 0.0 | 1.61 | 0.27 | 0.71 | 0.83 | 3.05 | 6264 | 763 | 3 | 0 | 3 | 0 | 0 | logfile |
✔ | 7oRN | 13043 | 2023-07-07 | 2021-06-06 | 2.8 | 2.83 | — | 2.8 | 0.004 | 0.59 | 1.0 | 0.04 | 12.58 | 0.00 | 1.978 | 4.09 | 0.19 | 2.1 | 97.9 | 0.0 | 1.14 | 0.82 | 0.89 | 4.23 | 2.8 | 0.003 | 0.48 | 0.0 | 0.04 | 15.17 | 0.00 | 1.981 | 5.36 | 0.76 | 2.5 | 97.5 | 0.0 | 1.27 | 0.36 | 0.78 | 0.91 | 3.88 | 14811 | 1700 | 6 | 35 | 3 | 92 | 0 | logfile |
✔ | 7RZU | 24778 | 2023-07-03 | 2021-08-27 | 2.3 | 2.32 | — | 2.0 | 0.006 | 0.50 | 0.0 | 0.04 | 13.61 | 0.01 | 2.212 | 7.50 | 0.00 | 2.9 | 97.1 | 0.0 | 1.69 | 0.77 | 0.78 | 1.84 | 2.0 | 0.002 | 0.48 | 0.0 | 0.03 | 15.88 | 0.00 | 2.308 | 6.69 | 1.40 | 0.0 | 100.0 | 0.0 | 5.49 | 0.47 | 0.80 | 0.81 | 1.54 | 2439 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Y9X | 33695 | 2023-07-09 | 2022-06-26 | 2.49 | 2.67 | 2.52 | 2.7 | 0.004 | 0.52 | 0.0 | 0.04 | 9.50 | 0.00 | 2.130 | 5.49 | 0.31 | 1.6 | 98.4 | 0.0 | -0.15 | 0.70 | 0.82 | 4.82 | 2.7 | 0.002 | 0.48 | 0.0 | 0.04 | 14.67 | 0.00 | 2.206 | 6.55 | 1.30 | 1.4 | 98.6 | 0.0 | 1.17 | 1.95 | 0.67 | 0.82 | 3.94 | 18662 | 2192 | 4 | 38 | 4 | 0 | 0 | logfile |
✔ | 7USW | 26741 | 2023-07-07 | 2022-04-26 | 3.1 | 3.48 | 3.14 | 3.5 | 0.004 | 0.78 | 0.0 | 0.04 | 15.91 | 0.01 | 2.254 | 7.09 | 0.21 | 3.1 | 96.9 | 0.0 | 2.17 | 0.63 | 0.80 | 2.13 | 3.5 | 0.002 | 0.48 | 0.0 | 0.04 | 16.01 | 0.00 | 2.249 | 5.38 | 0.35 | 3.2 | 96.8 | 0.0 | 2.29 | 0.27 | 0.63 | 0.82 | 2.11 | 14322 | 1676 | 12 | 0 | 68 | 0 | 0 | logfile |
✔ | 7NKQ | 12446 | 2023-07-05 | 2021-02-18 | 2.98 | 3.25 | — | 3.1 | 0.004 | 0.49 | 0.0 | 0.04 | 13.52 | 0.00 | 2.018 | 7.16 | 0.00 | 2.7 | 97.3 | 0.0 | 1.39 | 0.81 | 0.81 | 2.98 | 3.1 | 0.003 | 0.48 | 0.0 | 0.04 | 15.71 | 0.00 | 2.008 | 6.87 | 1.05 | 2.3 | 97.7 | 0.0 | 2.27 | 0.33 | 0.82 | 0.84 | 2.51 | 10621 | 714 | 8 | 0 | 0 | 0 | 5312 | logfile |
✔ | 7XKi | 33254 | 2023-07-15 | 2022-04-19 | 3.4 | 3.86 | 3.39 | 3.8 | 0.002 | 0.41 | 0.0 | 0.04 | 13.46 | 0.00 | 2.299 | 1.34 | 0.00 | 2.5 | 97.5 | 0.0 | 5.17 | 0.60 | 0.76 | 2.60 | 3.8 | 0.003 | 0.48 | 0.0 | 0.04 | 14.62 | 0.00 | 2.187 | 4.18 | 0.06 | 2.8 | 97.2 | 0.0 | 4.42 | 1.10 | 0.54 | 0.76 | 2.54 | 32280 | 1992 | 24 | 0 | 48 | 0 | 15996 | logfile |
✔ | 6ZBG | 11154 | 2023-07-09 | 2020-06-08 | 3.2 | 3.97 | 3.37 | 3.6 | 0.010 | 1.15 | 0.0 | 0.07 | 13.62 | 0.01 | 2.468 | 1.13 | 0.00 | 1.1 | 98.9 | 0.0 | 0.72 | 0.84 | 0.78 | 2.20 | 3.6 | 0.002 | 0.48 | 0.0 | 0.03 | 15.23 | 0.00 | 2.139 | 4.51 | 0.09 | 0.8 | 99.2 | 0.0 | 4.37 | 1.86 | 0.85 | 0.79 | 1.51 | 19534 | 1160 | 4 | 0 | 0 | 0 | 9902 | logfile |
✔ | 7NKD | 12438 | 2023-07-05 | 2021-02-17 | 3.12 | 3.57 | — | 3.2 | 0.003 | 0.45 | 0.0 | 0.04 | 14.50 | 0.00 | 2.134 | 6.59 | 0.00 | 1.7 | 98.3 | 0.0 | 2.45 | 0.85 | 0.81 | 2.57 | 3.2 | 0.003 | 0.48 | 0.0 | 0.04 | 15.43 | 0.00 | 2.128 | 7.12 | 0.00 | 1.5 | 98.5 | 0.0 | 3.15 | 0.91 | 0.85 | 0.83 | 2.19 | 9555 | 643 | 8 | 0 | 0 | 0 | 4768 | logfile |