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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6iGM | 9668 | 2024-03-19 | 2018-09-25 | 4.0 | 4.14 | — | 4.1 | 0.004 | 0.88 | 0.0 | 0.05 | 10.13 | 0.01 | 1.054 | 20.78 | 2.70 | 7.3 | 91.6 | 1.1 | -4.30 | 0.70 | 0.62 | — | 4.0 | 0.003 | 0.80 | 0.0 | 0.05 | 16.17 | 0.00 | 2.106 | 15.09 | 3.65 | 7.3 | 92.6 | 0.1 | -0.72 | 3.01 | 0.77 | 0.74 | — | 24257 | 3054 | 9 | 0 | 62 | 0 | 0 | logfile |
✔ | 8DDY | 27382 | 2024-03-11 | 2022-06-19 | 2.89 | 2.51 | 2.86 | 2.8 | 0.016 | 1.75 | 0.0 | 0.07 | 16.38 | 0.01 | 2.247 | 4.49 | 3.82 | 4.8 | 95.2 | 0.0 | -2.48 | 0.54 | 0.84 | 3.00 | 2.8 | 0.003 | 0.66 | 0.0 | 0.04 | 17.73 | 0.00 | 2.125 | 10.48 | 2.04 | 3.5 | 96.5 | 0.0 | 1.79 | 0.45 | 0.56 | 0.86 | 2.47 | 7968 | 954 | 18 | 0 | 9 | 330 | 0 | logfile |
✔ | 6T7C | 10393 | 2024-03-15 | 2019-10-21 | 4.0 | 4.27 | 3.92 | 3.8 | 0.008 | 0.88 | 1.0 | 0.05 | 26.05 | 0.01 | 2.081 | 7.85 | 0.00 | 1.7 | 98.2 | 0.1 | -2.97 | 0.84 | 0.80 | — | 3.9 | 0.004 | 0.74 | 0.0 | 0.04 | 26.09 | 0.00 | 2.119 | 15.43 | 5.15 | 2.5 | 97.5 | 0.0 | 2.34 | 1.35 | 0.86 | 0.83 | — | 10606 | 917 | 12 | 190 | 0 | 0 | 0 | logfile |
✔ | 7MR4 | 23956 | 2024-03-17 | 2021-05-07 | 4.5 | 4.68 | — | 4.5 | 0.004 | 0.86 | 0.0 | 0.05 | 17.06 | 0.01 | 2.014 | 7.21 | 0.00 | 5.4 | 94.6 | 0.0 | -1.71 | 0.82 | 0.81 | — | 4.5 | 0.003 | 0.62 | 0.0 | 0.04 | 16.82 | 0.00 | 2.184 | 14.74 | 0.06 | 5.6 | 94.4 | 0.0 | -0.36 | 0.48 | 0.82 | 0.82 | — | 17203 | 2057 | 5 | 33 | 0 | 0 | 0 | logfile |
✔ | 7WJo | 32547 | 2024-03-15 | 2022-01-07 | 3.2 | 3.40 | — | 3.3 | 0.006 | 0.55 | 0.0 | 0.04 | 11.70 | 0.00 | 2.203 | 4.21 | 0.29 | 4.4 | 95.6 | 0.0 | 1.94 | 0.67 | 0.82 | 2.26 | 3.4 | 0.003 | 0.52 | 0.0 | 0.04 | 14.62 | 0.00 | 2.233 | 5.70 | 2.69 | 5.1 | 94.9 | 0.0 | 1.49 | 0.51 | 0.67 | 0.85 | 1.70 | 12932 | 1602 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7K37 | 22652 | 2024-03-18 | 2020-09-10 | 2.8 | 2.95 | — | 2.9 | 0.006 | 0.74 | 0.0 | 0.05 | 14.71 | 0.00 | 2.114 | 9.40 | 0.13 | 4.5 | 95.5 | 0.0 | -0.36 | 0.78 | 0.85 | 3.63 | 2.9 | 0.004 | 0.68 | 0.0 | 0.05 | 15.23 | 0.00 | 2.139 | 8.67 | 2.31 | 4.8 | 95.2 | 0.0 | -0.17 | 1.39 | 0.81 | 0.89 | 3.39 | 21561 | 2712 | 27 | 0 | 54 | 0 | 0 | logfile |
✔ | 7WTH | 32786 | 2024-03-10 | 2022-02-04 | 4.3 | 3.63 | — | 4.0 | 0.004 | 0.78 | 0.0 | 0.05 | 12.97 | 0.01 | 2.169 | 9.08 | 0.85 | 8.0 | 92.0 | 0.0 | -2.03 | 0.69 | 0.70 | — | 4.0 | 0.003 | 0.69 | 0.0 | 0.05 | 13.50 | 0.00 | 2.162 | 9.39 | 0.00 | 9.9 | 90.1 | 0.0 | -2.15 | 0.53 | 0.69 | 0.71 | — | 3257 | 421 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WoA | 32646 | 2024-03-22 | 2022-01-21 | 3.25 | 2.98 | — | 3.2 | 0.002 | 0.45 | 0.0 | 0.04 | 9.46 | 0.00 | 2.229 | 6.56 | 4.23 | 3.8 | 96.2 | 0.0 | -3.46 | 0.86 | 0.78 | 2.52 | 3.2 | 0.004 | 0.67 | 0.0 | 0.05 | 13.98 | 0.00 | 2.139 | 11.13 | 3.68 | 7.9 | 92.1 | 0.0 | -2.07 | 1.17 | 0.89 | 0.85 | 2.78 | 31952 | 4060 | 10 | 0 | 39 | 0 | 0 | logfile |
✔ | 8DJB | 27459 | 2024-03-17 | 2022-06-30 | 3.18 | 3.51 | 3.10 | 3.3 | 0.005 | 0.72 | 0.0 | 0.06 | 12.90 | 0.00 | 1.908 | 12.93 | 6.96 | 4.2 | 95.6 | 0.2 | -0.69 | 0.82 | 0.81 | 1.93 | 3.3 | 0.003 | 0.61 | 0.0 | 0.04 | 15.59 | 0.00 | 2.188 | 7.12 | 1.41 | 3.1 | 96.9 | 0.0 | 0.81 | 1.07 | 0.86 | 0.90 | 2.24 | 16781 | 2156 | 9 | 0 | 1 | 0 | 0 | logfile |
✔ | 7XNP | 33322 | 2024-03-15 | 2022-04-29 | 2.9 | 2.50 | 2.96 | 2.9 | 0.005 | 0.75 | 0.0 | 0.04 | 27.19 | 0.01 | 2.297 | 2.36 | 0.00 | 2.1 | 97.9 | 0.0 | -0.95 | 0.72 | 0.77 | 3.05 | 2.9 | 0.004 | 0.60 | 0.0 | 0.04 | 27.99 | 0.00 | 2.172 | 6.33 | 2.42 | 2.1 | 97.9 | 0.0 | 2.03 | 0.26 | 0.72 | 0.80 | 3.04 | 10943 | 746 | 10 | 246 | 0 | 0 | 0 | logfile |
✔ | 3JCL | 6526 | 2024-03-19 | 2015-12-21 | 4.0 | 4.03 | — | 4.0 | 0.018 | 1.83 | 9.0 | 0.09 | 9.75 | 0.01 | 2.379 | 2.74 | 0.00 | 5.2 | 94.3 | 0.6 | -0.72 | 0.71 | 0.74 | — | 4.0 | 0.003 | 0.74 | 0.0 | 0.04 | 14.38 | 0.00 | 2.182 | 12.38 | 3.16 | 7.5 | 92.5 | 0.0 | -0.28 | 0.95 | 0.69 | 0.68 | — | 24822 | 3201 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CLR | 30398 | 2024-03-20 | 2020-07-21 | 3.5 | 3.61 | — | 3.5 | 0.011 | 1.43 | 0.0 | 0.08 | 14.05 | 0.01 | 2.207 | 6.47 | 5.50 | 6.1 | 93.9 | 0.0 | -2.64 | 0.87 | 0.88 | 1.90 | 3.5 | 0.005 | 0.67 | 0.0 | 0.04 | 15.98 | 0.00 | 2.183 | 5.39 | 3.97 | 4.8 | 95.2 | 0.0 | -0.92 | 0.66 | 0.88 | 0.89 | 1.83 | 98878 | 13338 | 52 | 0 | 0 | 0 | 0 | logfile |
✔ | 6V01 | 20967 | 2024-03-16 | 2019-11-18 | 3.9 | 3.77 | — | 3.8 | 0.009 | 1.31 | 8.0 | 0.22 | 18.92 | 0.01 | 2.260 | 5.97 | 2.34 | 4.7 | 95.3 | 0.0 | -5.38 | 0.62 | 0.70 | 1.91 | 3.8 | 0.003 | 0.63 | 0.0 | 0.04 | 18.71 | 0.00 | 2.141 | 8.13 | 2.63 | 3.2 | 96.8 | 0.0 | -0.84 | 0.75 | 0.63 | 0.69 | 1.91 | 15480 | 2060 | 20 | 0 | 12 | 0 | 0 | logfile |
✔ | 8G6G | 29767 | 2024-03-15 | 2023-02-15 | 2.93 | 3.16 | 2.92 | 3.1 | 0.003 | 0.57 | 0.0 | 0.04 | 28.34 | 0.00 | 2.238 | 4.36 | 1.16 | 2.1 | 97.9 | 0.0 | 2.83 | 0.86 | 0.86 | 2.41 | 3.1 | 0.004 | 0.55 | 0.0 | 0.03 | 28.33 | 0.00 | 2.267 | 4.10 | 2.18 | 2.0 | 98.0 | 0.0 | 2.63 | 0.13 | 0.88 | 0.89 | 2.52 | 12985 | 825 | 11 | 314 | 0 | 0 | 0 | logfile |
✔ | 8WAY | 37409 | 2024-03-23 | 2023-09-08 | 2.85 | 3.17 | 2.99 | 3.2 | 0.008 | 0.78 | 0.0 | 0.05 | 15.37 | 0.00 | 1.799 | 10.65 | 1.17 | 3.9 | 95.9 | 0.2 | 0.47 | 0.58 | 0.57 | 2.10 | 3.1 | 0.005 | 0.55 | 0.0 | 0.04 | 18.31 | 0.00 | 1.802 | 32.37 | 3.09 | 5.4 | 94.4 | 0.2 | 0.76 | 1.57 | 0.75 | 0.83 | 2.49 | 35753 | 4182 | 24 | 110 | 10 | 0 | 23 | logfile |
✔ | 7K39 | 22653 | 2024-03-18 | 2020-09-10 | 3.0 | 3.09 | — | 3.0 | 0.007 | 0.78 | 0.0 | 0.05 | 14.87 | 0.00 | 2.099 | 8.98 | 0.00 | 5.2 | 94.8 | 0.0 | -0.61 | 0.78 | 0.85 | 3.24 | 3.0 | 0.006 | 1.02 | 0.0 | 0.05 | 15.65 | 0.01 | 2.024 | 9.00 | 2.40 | 5.9 | 94.1 | 0.0 | -0.26 | 0.46 | 0.82 | 0.89 | 2.99 | 21561 | 2712 | 27 | 0 | 54 | 0 | 0 | logfile |
✔ | 6PVL | 20492 | 2024-03-18 | 2019-07-21 | 4.4 | 4.48 | — | 4.4 | 0.008 | 1.13 | 0.0 | 0.06 | 11.67 | 0.01 | 2.202 | 6.80 | 1.39 | 15.4 | 84.2 | 0.5 | -5.53 | 0.69 | 0.81 | — | 4.4 | 0.004 | 0.80 | 0.0 | 0.04 | 13.07 | 0.00 | 2.117 | 14.31 | 0.00 | 12.9 | 87.0 | 0.2 | -1.11 | 1.46 | 0.69 | 0.81 | — | 21006 | 2576 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 6BFU | 7094 | 2024-03-19 | 2017-10-27 | 3.5 | 3.80 | — | 3.7 | 0.018 | 1.39 | 0.0 | 0.11 | 18.52 | 0.01 | 2.005 | 1.41 | 0.35 | 3.2 | 96.6 | 0.2 | 0.52 | 0.86 | 0.84 | 2.39 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 12.83 | 0.00 | 2.147 | 7.86 | 1.69 | 3.6 | 96.4 | 0.0 | 0.64 | 0.73 | 0.82 | 0.85 | 2.71 | 24480 | 2892 | 45 | 0 | 168 | 0 | 0 | logfile |
✔ | 7V3P | 31671 | 2024-03-20 | 2021-08-11 | 3.6 | 3.81 | — | 3.7 | 0.008 | 1.14 | 5.0 | 0.07 | 14.31 | 0.01 | 2.011 | 12.91 | 2.27 | 7.7 | 91.3 | 1.0 | -2.21 | 0.75 | 0.67 | 1.92 | 3.7 | 0.002 | 0.61 | 0.0 | 0.05 | 14.92 | 0.00 | 2.010 | 6.72 | 0.60 | 7.2 | 92.6 | 0.2 | -1.77 | 1.26 | 0.77 | 0.71 | 2.07 | 26331 | 1674 | 6 | 0 | 4 | 0 | 12814 | logfile |
✔ | 7YFi | 33791 | 2024-03-19 | 2022-07-08 | 3.3 | 3.42 | 3.48 | 3.3 | 0.004 | 0.70 | 0.0 | 0.05 | 17.74 | 0.01 | 2.097 | 8.86 | 1.20 | 6.1 | 93.5 | 0.4 | -0.21 | 0.84 | 0.77 | 1.68 | 3.0 | 0.003 | 0.59 | 0.0 | 0.04 | 16.82 | 0.00 | 2.127 | 8.70 | 2.33 | 6.9 | 92.9 | 0.2 | 0.27 | 1.34 | 0.87 | 0.83 | 2.23 | 24135 | 2980 | 19 | 0 | 45 | 0 | 0 | logfile |