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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6XTB | 10618 | 2024-03-10 | 2020-01-15 | 4.3 | 4.32 | — | 3.9 | 0.006 | 1.17 | 0.0 | 0.07 | 8.68 | 0.00 | 2.369 | 3.00 | 0.00 | 15.6 | 84.4 | 0.0 | -4.66 | 0.32 | 0.43 | — | 4.1 | 0.005 | 1.12 | 0.0 | 0.05 | 9.13 | 0.00 | 2.119 | 10.22 | 0.00 | 25.1 | 74.9 | 0.0 | -5.72 | 2.48 | 0.34 | 0.65 | — | 1161 | 235 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DA4 | 30622 | 2024-03-10 | 2020-10-14 | 4.24 | 3.75 | — | 4.2 | 0.010 | 1.54 | 0.0 | 0.08 | 17.16 | 0.01 | 2.245 | 79.80 | 0.00 | 50.0 | 50.0 | 0.0 | -8.65 | 0.39 | 0.66 | — | 4.3 | 0.004 | 0.98 | 0.0 | 0.04 | 11.88 | 0.00 | 2.201 | 17.17 | 0.00 | 25.0 | 75.0 | 0.0 | -5.95 | 3.06 | 0.36 | 0.60 | — | 507 | 66 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J2P | 5499 | 2024-03-14 | 2012-11-30 | 3.6 | 3.28 | — | 3.4 | 0.010 | 1.92 | 0.0 | 0.12 | 17.50 | 0.02 | 2.155 | 110.32 | 20.13 | 29.7 | 46.3 | 24.1 | -7.75 | 0.42 | 0.79 | 1.08 | 3.3 | 0.004 | 0.91 | 0.0 | 0.04 | 18.21 | 0.00 | 1.845 | 75.71 | 11.64 | 20.8 | 75.4 | 3.8 | -4.38 | 0.84 | 0.39 | 0.73 | 1.07 | 9890 | 1134 | 8 | 0 | 6 | 0 | 1086 | logfile |
✔ | 6B19 | 7031 | 2024-03-10 | 2017-09-18 | 4.5 | 4.61 | — | 4.4 | 0.023 | 1.38 | 0.0 | 0.05 | 15.60 | 0.01 | 2.201 | 16.18 | 0.00 | 19.4 | 80.5 | 0.1 | -5.73 | 0.74 | 0.63 | — | 4.4 | 0.003 | 0.84 | 0.0 | 0.04 | 17.80 | 0.00 | 1.954 | 30.13 | 0.00 | 24.3 | 75.7 | 0.0 | -4.85 | 1.30 | 0.77 | 0.69 | — | 5699 | 907 | 4 | 38 | 0 | 0 | 409 | logfile |
✔ | 6H3J | 0134 | 2024-03-18 | 2018-07-18 | 3.7 | 3.83 | — | 3.7 | 0.007 | 0.87 | 0.0 | 0.05 | 10.17 | 0.00 | 2.025 | 43.38 | 0.05 | 23.8 | 76.2 | 0.0 | -6.63 | 0.77 | 0.85 | 3.89 | 3.7 | 0.005 | 0.65 | 0.0 | 0.04 | 13.62 | 0.00 | 1.858 | 56.90 | 3.87 | 24.3 | 75.7 | 0.0 | -5.32 | 2.68 | 0.78 | 0.87 | 2.95 | 20301 | 2511 | 3 | 0 | 0 | 0 | 212 | logfile |
✔ | 7BZX | 30262 | 2024-03-10 | 2020-04-28 | 4.0 | 4.19 | — | 3.2 | 0.019 | 2.22 | 9.0 | 0.12 | 8.56 | 0.01 | 2.485 | 2.40 | 0.00 | 6.6 | 92.1 | 1.3 | -2.90 | 0.47 | 0.25 | — | 2.8 | 0.006 | 1.18 | 0.0 | 0.05 | 9.20 | 0.01 | 2.035 | 27.91 | 0.00 | 24.1 | 75.8 | 0.1 | -4.93 | 2.97 | 0.75 | 0.58 | — | 5652 | 1154 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 5G2X | 3331 | 2024-03-17 | 2016-04-16 | 3.8 | 3.49 | — | 3.4 | 0.001 | 0.32 | 0.0 | 0.02 | 21.03 | 0.00 | 2.219 | 4.36 | 0.45 | 19.7 | 74.4 | 5.9 | -5.72 | 0.51 | 0.30 | -0.09 | 3.3 | 0.007 | 1.02 | 0.0 | 0.05 | 25.19 | 0.01 | 1.900 | 45.40 | 4.54 | 22.7 | 76.1 | 1.3 | -5.20 | 2.37 | 0.80 | 0.67 | 0.25 | 19072 | 487 | 3 | 704 | 0 | 0 | 0 | logfile |
✔ | 7DWV | 30887 | 2024-03-10 | 2021-01-18 | 3.07 | 2.95 | — | 3.6 | 0.007 | 0.80 | 0.0 | 0.06 | 14.69 | 0.00 | 2.258 | 16.67 | 0.00 | 26.8 | 73.2 | 0.0 | -7.45 | 0.41 | 0.75 | 4.09 | 4.1 | 0.004 | 0.78 | 0.0 | 0.05 | 17.73 | 0.00 | 2.189 | 18.12 | 19.05 | 23.6 | 76.4 | 0.0 | -6.14 | 1.49 | 0.41 | 0.75 | 2.77 | 2064 | 258 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6DJP | 7939 | 2024-03-11 | 2018-05-25 | 4.8 | 5.02 | — | 4.8 | 0.012 | 2.01 | 0.0 | 0.08 | 11.31 | 0.01 | 2.368 | 0.45 | 0.00 | 4.6 | 95.4 | 0.0 | -0.74 | 0.76 | 0.65 | — | 4.8 | 0.007 | 1.19 | 0.0 | 0.05 | 10.55 | 0.01 | 2.168 | 17.65 | 0.00 | 23.0 | 76.9 | 0.1 | -4.03 | 1.19 | 0.82 | 0.76 | — | 7307 | 1393 | 16 | 0 | 23 | 0 | 0 | logfile |
✔ | 7YR7 | 34048 | 2024-03-10 | 2022-08-09 | 3.8 | 4.63 | 4.40 | 4.6 | 0.008 | 1.25 | 1.0 | 0.09 | 25.59 | 0.01 | 2.385 | 7.94 | 4.74 | 16.7 | 83.3 | 0.0 | -5.36 | 0.64 | 0.60 | 0.33 | 4.6 | 0.004 | 0.80 | 0.0 | 0.04 | 25.52 | 0.00 | 2.109 | 23.71 | 8.39 | 23.0 | 77.0 | 0.0 | -3.48 | 1.71 | 0.67 | 0.66 | 0.64 | 5102 | 330 | 7 | 118 | 0 | 0 | 0 | logfile |
✔ | 6TNG | 10532 | 2024-03-11 | 2019-12-07 | 4.1 | 4.25 | 3.91 | 4.0 | 0.008 | 1.39 | 0.0 | 0.00 | 8.74 | 0.01 | 2.183 | 11.35 | 0.00 | 18.9 | 80.2 | 0.8 | -5.16 | 0.75 | 0.70 | — | 4.0 | 0.004 | 0.85 | 0.0 | 0.00 | 6.39 | 0.00 | 2.200 | 10.87 | 0.00 | 22.8 | 77.1 | 0.1 | -3.08 | 0.35 | 0.76 | 0.72 | — | 8240 | 2060 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 5A9Z | 6396 | 2024-03-27 | 2015-07-23 | 4.7 | 4.83 | — | 4.7 | 0.013 | 1.89 | 26.0 | 0.14 | 28.05 | 0.03 | 0.000 | 199.42 | 29.15 | 25.1 | 49.6 | 25.2 | -7.73 | 0.81 | 0.65 | — | 4.7 | 0.006 | 0.94 | 0.0 | 0.04 | 25.37 | 0.01 | 0.000 | 36.51 | 0.22 | 20.5 | 77.2 | 2.3 | -4.19 | 2.91 | 0.87 | 0.81 | — | 150547 | 6671 | 58 | 4527 | 131 | 0 | 0 | logfile |
✔ | 5YYS | 6859 | 2024-03-19 | 2017-12-11 | 4.2 | 4.57 | — | 4.1 | 0.016 | 2.27 | 0.0 | 0.10 | 15.30 | 0.01 | 2.201 | 22.76 | 2.34 | 27.3 | 70.1 | 2.6 | -5.98 | 0.85 | 0.71 | — | 4.1 | 0.004 | 1.19 | 0.0 | 0.06 | 12.69 | 0.01 | 2.105 | 31.38 | 0.00 | 22.1 | 77.4 | 0.5 | -3.75 | 1.68 | 0.87 | 0.73 | — | 24044 | 3244 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RFP | 24444 | 2024-03-10 | 2021-07-14 | 4.4 | 4.57 | — | 4.3 | 0.014 | 2.06 | 8.0 | 0.12 | 7.12 | 0.01 | 1.581 | 3.60 | 8.00 | 9.5 | 87.5 | 3.0 | -1.46 | 0.68 | 0.61 | — | 4.3 | 0.005 | 0.99 | 0.0 | 0.05 | 7.64 | 0.00 | 2.109 | 12.42 | 0.00 | 21.8 | 77.6 | 0.6 | -4.29 | 1.50 | 0.81 | 0.76 | — | 5532 | 1114 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZYD | 11557 | 2024-03-22 | 2020-07-31 | 3.0 | 3.62 | 2.76 | 3.4 | 0.017 | 1.20 | 0.0 | 0.12 | 19.71 | 0.01 | 2.269 | 4.88 | 0.00 | 5.1 | 94.9 | 0.0 | -3.12 | 0.75 | 0.77 | 4.36 | 3.4 | 0.059 | 2.56 | 0.0 | 0.17 | 20.87 | 0.02 | 1.761 | 56.86 | 14.22 | 21.7 | 78.3 | 0.0 | -6.19 | 1.46 | 0.79 | 0.86 | 3.30 | 31423 | 1792 | 14 | 0 | 476 | 0 | 14490 | logfile |
✔ | 6RTB | 4996 | 2024-03-10 | 2019-05-22 | 3.46 | 3.57 | — | 3.5 | 0.009 | 1.23 | 0.0 | 0.07 | 15.08 | 0.01 | 2.122 | 6.27 | 2.61 | 18.9 | 80.9 | 0.2 | -4.64 | 0.62 | 0.79 | 4.22 | 3.5 | 0.005 | 0.82 | 0.0 | 0.05 | 15.69 | 0.00 | 2.115 | 15.56 | 7.84 | 21.4 | 78.6 | 0.0 | -4.45 | 0.81 | 0.63 | 0.81 | 4.11 | 4681 | 699 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TNF | 10531 | 2024-03-14 | 2019-12-07 | 3.8 | 2.90 | 3.67 | 2.7 | 0.032 | 1.64 | 0.0 | 0.32 | 18.93 | 0.01 | 2.236 | 8.40 | 0.00 | 17.8 | 81.5 | 0.7 | -5.32 | 0.60 | 0.56 | — | 2.6 | 0.006 | 1.19 | 0.0 | 0.10 | 15.66 | 0.01 | 2.088 | 17.70 | 0.00 | 21.3 | 78.6 | 0.1 | -4.12 | 0.55 | 0.65 | 0.64 | — | 9559 | 2206 | 5 | 0 | 66 | 0 | 0 | logfile |
✔ | 7V48 | 31703 | 2024-03-10 | 2021-08-12 | 3.0 | 2.27 | — | 3.3 | 0.002 | 0.48 | 0.0 | 0.05 | 12.91 | 0.00 | 2.295 | 8.64 | 0.00 | 9.8 | 90.2 | 0.0 | -5.61 | 0.37 | 0.75 | 4.10 | 3.3 | 0.004 | 0.65 | 0.0 | 0.05 | 14.15 | 0.00 | 2.253 | 4.89 | 2.65 | 21.3 | 78.7 | 0.0 | -4.60 | 0.41 | 0.39 | 0.76 | 4.74 | 2598 | 378 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SZ4 | 25560 | 2024-03-25 | 2021-11-25 | 4.8 | 7.97 | 4.67 | 3.9 | 0.003 | 0.79 | 0.0 | 0.05 | 14.41 | 0.01 | 2.097 | 25.58 | 0.02 | 18.8 | 80.5 | 0.7 | -3.20 | 0.89 | 0.78 | — | 4.1 | 0.004 | 0.83 | 0.0 | 0.05 | 14.66 | 0.01 | 2.095 | 35.03 | 0.00 | 20.3 | 79.0 | 0.7 | -3.12 | 0.50 | 0.89 | 0.79 | — | 48242 | 5973 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 5iMQ | 6584 | 2024-03-01 | 2016-03-06 | 3.8 | 3.95 | — | 3.9 | 0.012 | 1.41 | 0.0 | 0.07 | 26.36 | 0.01 | 1.006 | 63.05 | 4.55 | 16.6 | 72.8 | 10.6 | -4.61 | 0.71 | 0.65 | 0.92 | 3.9 | 0.006 | 0.92 | 2.0 | 0.05 | 25.31 | 0.01 | 1.725 | 25.39 | 7.38 | 18.5 | 79.1 | 2.4 | -3.66 | 0.78 | 0.82 | 0.80 | 0.46 | 153046 | 6640 | 56 | 4680 | 1 | 0 | 0 | logfile |